RNA–Protein interactions for RNA: ENST00000448958.2

AP006222.1-202, humanhuman

TSL 5

Gene AP006222.1, Length 2,250 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP006222.1-202ENST00000448958 NISCHQ9Y2I1 1504 aa20.53■□□□□ 0.88
AP006222.1-202ENST00000448958 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.48
AP006222.1-202ENST00000448958 AEBP2Q6ZN18 517 aaPredicted RBP17.62■□□□□ 0.41
AP006222.1-202ENST00000448958 SHROOM4Q9ULL8 1493 aa17.49■□□□□ 0.39
AP006222.1-202ENST00000448958 CCDC180Q9P1Z9 1646 aa17.45■□□□□ 0.38
AP006222.1-202ENST00000448958 ZCCHC6Q5VYS8 1495 aaKnown RBP17.39■□□□□ 0.37
AP006222.1-202ENST00000448958 SUPT5HO00267 1087 aaKnown RBP17.18■□□□□ 0.34
AP006222.1-202ENST00000448958 DCAF8L2P0C7V8 631 aa16.91■□□□□ 0.3
AP006222.1-202ENST00000448958 DCAF1Q9Y4B6 1507 aa16.87■□□□□ 0.29
AP006222.1-202ENST00000448958 MYO15BQ96JP2 1530 aa16.75■□□□□ 0.27
AP006222.1-202ENST00000448958 ABCC9O60706 1549 aa16.44■□□□□ 0.22
AP006222.1-202ENST00000448958 HRCP23327 699 aa16.39■□□□□ 0.21
AP006222.1-202ENST00000448958 SCRIBQ14160 1630 aa16.33■□□□□ 0.2
AP006222.1-202ENST00000448958 SLC24A1O60721 1099 aa16.31■□□□□ 0.2
AP006222.1-202ENST00000448958 PCGF6Q9BYE7 350 aa16.3■□□□□ 0.2
AP006222.1-202ENST00000448958 RSF1Q96T23 1441 aaPredicted RBP16.27■□□□□ 0.19
AP006222.1-202ENST00000448958 LOC105371045A0A1W2PR82 267 aa16.26■□□□□ 0.19
AP006222.1-202ENST00000448958 PHF23Q9BUL5 403 aaPredicted RBP16.21■□□□□ 0.19
AP006222.1-202ENST00000448958 RB1CC1Q8TDY2 1594 aa16.12■□□□□ 0.17
AP006222.1-202ENST00000448958 NACADO15069 1562 aa16.1■□□□□ 0.17
AP006222.1-202ENST00000448958 TRIM41Q8WV44 630 aa16.02■□□□□ 0.15
AP006222.1-202ENST00000448958 TRIM26Q12899 539 aaPredicted RBP16.01■□□□□ 0.15
AP006222.1-202ENST00000448958 PPARGC1BQ86YN6 1023 aaKnown RBP16.01■□□□□ 0.15
AP006222.1-202ENST00000448958 CECR2Q9BXF3 1484 aa15.99■□□□□ 0.15
AP006222.1-202ENST00000448958 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.14
AP006222.1-202ENST00000448958 WIZO95785 1651 aa15.88■□□□□ 0.13
AP006222.1-202ENST00000448958 FAM9AQ8IZU1 332 aaPredicted RBP15.87■□□□□ 0.13
AP006222.1-202ENST00000448958 BAZ1AQ9NRL2 1556 aaPredicted RBP15.81■□□□□ 0.12
AP006222.1-202ENST00000448958 EIF4G1Q04637 1599 aaKnown RBP15.73■□□□□ 0.11
AP006222.1-202ENST00000448958 EHMT2Q96KQ7 1210 aa15.7■□□□□ 0.1
AP006222.1-202ENST00000448958 ZEB1P37275 1124 aaPredicted RBP15.7■□□□□ 0.1
AP006222.1-202ENST00000448958 TOP2AP11388 1531 aaKnown RBP15.65■□□□□ 0.1
AP006222.1-202ENST00000448958 SMARCA4P51532 1647 aa15.63■□□□□ 0.09
AP006222.1-202ENST00000448958 UNC13AQ9UPW8 1703 aa15.6■□□□□ 0.09
AP006222.1-202ENST00000448958 CCDC88BA6NC98 1476 aa15.56■□□□□ 0.08
AP006222.1-202ENST00000448958 SMARCA2P51531 1590 aa15.56■□□□□ 0.08
AP006222.1-202ENST00000448958 ABCC8Q09428 1581 aa15.54■□□□□ 0.08
AP006222.1-202ENST00000448958 SOGA1O94964 1423 aa15.4■□□□□ 0.06
AP006222.1-202ENST00000448958 WRNQ14191 1432 aaPredicted RBP eCLIP15.4■□□□□ 0.06
AP006222.1-202ENST00000448958 BICRAQ9NZM4 1560 aa15.39■□□□□ 0.05
AP006222.1-202ENST00000448958 CEP162Q5TB80 1403 aa15.38■□□□□ 0.05
AP006222.1-202ENST00000448958 EEA1Q15075 1411 aa15.36■□□□□ 0.05
AP006222.1-202ENST00000448958 TNIKQ9UKE5 1360 aa15.35■□□□□ 0.05
AP006222.1-202ENST00000448958 PEG3Q9GZU2 1588 aa15.34■□□□□ 0.05
AP006222.1-202ENST00000448958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.33■□□□□ 0.04
AP006222.1-202ENST00000448958 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
AP006222.1-202ENST00000448958 RUSC2Q8N2Y8 1516 aa15.32■□□□□ 0.04
AP006222.1-202ENST00000448958 CSRNP3Q8WYN3 585 aa15.31■□□□□ 0.04
AP006222.1-202ENST00000448958 CCER1Q8TC90 406 aaPredicted RBP15.3■□□□□ 0.04
AP006222.1-202ENST00000448958 GOLGA3Q08378 1498 aa15.26■□□□□ 0.03
AP006222.1-202ENST00000448958 UBTFP17480 764 aaKnown RBP15.24■□□□□ 0.03
AP006222.1-202ENST00000448958 TTBK1Q5TCY1 1321 aaPredicted RBP15.23■□□□□ 0.03
AP006222.1-202ENST00000448958 SYNJ1O43426 1573 aa15.21■□□□□ 0.03
AP006222.1-202ENST00000448958 ATAD2BQ9ULI0 1458 aa15.19■□□□□ 0.02
AP006222.1-202ENST00000448958 CEP164Q9UPV0 1460 aa15.17■□□□□ 0.02
AP006222.1-202ENST00000448958 KIF21BO75037 1637 aa15.17■□□□□ 0.02
AP006222.1-202ENST00000448958 BAZ1BQ9UIG0 1483 aaKnown RBP15.15■□□□□ 0.02
AP006222.1-202ENST00000448958 SCAF1Q9H7N4 1312 aaKnown RBP15.13■□□□□ 0.01
AP006222.1-202ENST00000448958 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
AP006222.1-202ENST00000448958 CLIP1P30622 1438 aa15.08■□□□□ 0
AP006222.1-202ENST00000448958 DIEXFQ68CQ4 756 aaKnown RBP15.05■□□□□ -0
AP006222.1-202ENST00000448958 RAPGEF2Q9Y4G8 1499 aa15.03■□□□□ -0
AP006222.1-202ENST00000448958 TOP2BQ02880 1626 aa15.03■□□□□ -0
AP006222.1-202ENST00000448958 VPS8Q8N3P4 1428 aa15.03■□□□□ -0
AP006222.1-202ENST00000448958 BIVM-ERCC5R4GMW8 1640 aa14.98□□□□□ -0.01
AP006222.1-202ENST00000448958 ACIN1Q9UKV3 1341 aaKnown RBP14.98□□□□□ -0.01
AP006222.1-202ENST00000448958 NEUROD1Q13562 356 aa14.94□□□□□ -0.02
AP006222.1-202ENST00000448958 HNRNPUL2Q1KMD3 747 aaKnown RBP14.94□□□□□ -0.02
AP006222.1-202ENST00000448958 ZNF316A6NFI3 1004 aaPredicted RBP14.93□□□□□ -0.02
AP006222.1-202ENST00000448958 APLP2Q06481 763 aa14.92□□□□□ -0.02
AP006222.1-202ENST00000448958 PELP1Q8IZL8 1130 aaKnown RBP14.91□□□□□ -0.02
AP006222.1-202ENST00000448958 HMGXB3Q12766 1538 aa14.91□□□□□ -0.02
AP006222.1-202ENST00000448958 ERICH3Q5RHP9 1530 aa14.91□□□□□ -0.02
AP006222.1-202ENST00000448958 PRXQ9BXM0 1461 aa14.89□□□□□ -0.03
AP006222.1-202ENST00000448958 NCAPD3P42695 1498 aa14.89□□□□□ -0.03
AP006222.1-202ENST00000448958 CENPBP07199 599 aaPredicted RBP14.89□□□□□ -0.03
AP006222.1-202ENST00000448958 RANGAP1P46060 587 aaPredicted RBP14.89□□□□□ -0.03
AP006222.1-202ENST00000448958 DAXXQ9UER7 740 aaPredicted RBP14.89□□□□□ -0.03
AP006222.1-202ENST00000448958 CUX1P39880 1505 aa14.86□□□□□ -0.03
AP006222.1-202ENST00000448958 ARAP1Q96P48 1450 aa14.84□□□□□ -0.03
AP006222.1-202ENST00000448958 GTF3C3Q9Y5Q9 886 aa14.8□□□□□ -0.04
AP006222.1-202ENST00000448958 CFTRP13569 1480 aa14.8□□□□□ -0.04
AP006222.1-202ENST00000448958 KIF27Q86VH2 1401 aa14.79□□□□□ -0.04
AP006222.1-202ENST00000448958 KANK4Q5T7N3 995 aaPredicted RBP14.73□□□□□ -0.05
AP006222.1-202ENST00000448958 CLSPNQ9HAW4 1339 aa14.72□□□□□ -0.05
AP006222.1-202ENST00000448958 PRDM2Q13029 1718 aa14.71□□□□□ -0.05
AP006222.1-202ENST00000448958 MIER1Q8N108 512 aa14.71□□□□□ -0.05
AP006222.1-202ENST00000448958 DHX57Q6P158 1386 aaKnown RBP14.7□□□□□ -0.06
AP006222.1-202ENST00000448958 RRBP1Q9P2E9 1410 aaKnown RBP14.7□□□□□ -0.06
AP006222.1-202ENST00000448958 ARHGAP35Q9NRY4 1499 aa14.69□□□□□ -0.06
AP006222.1-202ENST00000448958 PRKCSHP14314 528 aaPredicted RBP14.68□□□□□ -0.06
AP006222.1-202ENST00000448958 KCNA4P22459 653 aa14.68□□□□□ -0.06
AP006222.1-202ENST00000448958 YTHDC1Q96MU7 727 aaKnown RBP14.67□□□□□ -0.06
AP006222.1-202ENST00000448958 CUX2O14529 1486 aa14.64□□□□□ -0.07
AP006222.1-202ENST00000448958 IGF1RP08069 1367 aa14.62□□□□□ -0.07
AP006222.1-202ENST00000448958 CCNB3Q8WWL7 1395 aa14.61□□□□□ -0.07
AP006222.1-202ENST00000448958 CADPSQ9ULU8 1353 aa14.6□□□□□ -0.07
AP006222.1-202ENST00000448958 FGD5Q6ZNL6 1462 aa14.57□□□□□ -0.08
AP006222.1-202ENST00000448958 RTN4Q9NQC3 1192 aaKnown RBP14.57□□□□□ -0.08
AP006222.1-202ENST00000448958 TIAM1Q13009 1591 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms