RNA–Protein interactions for RNA: ENST00000448359.1

LINC01106-202, Transcript of long intergenic non-protein coding RNA 1106, humanhuman

TSL 1 (best)

Gene LINC01106, Length 2,443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01106-202ENST00000448359 NISCHQ9Y2I1 1504 aa26.09■■□□□ 1.77
LINC01106-202ENST00000448359 SHROOM4Q9ULL8 1493 aa22.3■■□□□ 1.16
LINC01106-202ENST00000448359 CCDC180Q9P1Z9 1646 aa22.24■■□□□ 1.15
LINC01106-202ENST00000448359 ZCCHC6Q5VYS8 1495 aaKnown RBP22.1■■□□□ 1.13
LINC01106-202ENST00000448359 SUPT5HO00267 1087 aaKnown RBP21.86■■□□□ 1.09
LINC01106-202ENST00000448359 DCAF8L2P0C7V8 631 aa21.61■■□□□ 1.05
LINC01106-202ENST00000448359 DCAF1Q9Y4B6 1507 aa21.4■■□□□ 1.02
LINC01106-202ENST00000448359 CHIC1Q5VXU3 224 aa21.24■□□□□ 0.99
LINC01106-202ENST00000448359 MYO15BQ96JP2 1530 aa21.23■□□□□ 0.99
LINC01106-202ENST00000448359 ABCC9O60706 1549 aa20.91■□□□□ 0.94
LINC01106-202ENST00000448359 SCRIBQ14160 1630 aa20.85■□□□□ 0.93
LINC01106-202ENST00000448359 HRCP23327 699 aa20.69■□□□□ 0.9
LINC01106-202ENST00000448359 PCGF6Q9BYE7 350 aa20.67■□□□□ 0.9
LINC01106-202ENST00000448359 RSF1Q96T23 1441 aaPredicted RBP20.64■□□□□ 0.9
LINC01106-202ENST00000448359 LOC105371045A0A1W2PR82 267 aa20.61■□□□□ 0.89
LINC01106-202ENST00000448359 RB1CC1Q8TDY2 1594 aa20.52■□□□□ 0.88
LINC01106-202ENST00000448359 NACADO15069 1562 aa20.5■□□□□ 0.87
LINC01106-202ENST00000448359 TRIM41Q8WV44 630 aa20.36■□□□□ 0.85
LINC01106-202ENST00000448359 CECR2Q9BXF3 1484 aa20.33■□□□□ 0.85
LINC01106-202ENST00000448359 MROH2BQ7Z745 1585 aa20.29■□□□□ 0.84
LINC01106-202ENST00000448359 TRIM26Q12899 539 aaPredicted RBP20.26■□□□□ 0.83
LINC01106-202ENST00000448359 PPARGC1BQ86YN6 1023 aaKnown RBP20.25■□□□□ 0.83
LINC01106-202ENST00000448359 WIZO95785 1651 aa20.23■□□□□ 0.83
LINC01106-202ENST00000448359 FAM9AQ8IZU1 332 aaPredicted RBP20.2■□□□□ 0.82
LINC01106-202ENST00000448359 BAZ1AQ9NRL2 1556 aaPredicted RBP20.12■□□□□ 0.81
LINC01106-202ENST00000448359 EHMT2Q96KQ7 1210 aa20.05■□□□□ 0.8
LINC01106-202ENST00000448359 EIF4G1Q04637 1599 aaKnown RBP19.97■□□□□ 0.79
LINC01106-202ENST00000448359 UNC13AQ9UPW8 1703 aa19.96■□□□□ 0.79
LINC01106-202ENST00000448359 SMARCA4P51532 1647 aa19.91■□□□□ 0.78
LINC01106-202ENST00000448359 TOP2AP11388 1531 aaKnown RBP19.9■□□□□ 0.78
LINC01106-202ENST00000448359 ZEB1P37275 1124 aaPredicted RBP19.84■□□□□ 0.77
LINC01106-202ENST00000448359 ABCC8Q09428 1581 aa19.79■□□□□ 0.76
LINC01106-202ENST00000448359 SMARCA2P51531 1590 aa19.79■□□□□ 0.76
LINC01106-202ENST00000448359 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.76
LINC01106-202ENST00000448359 PELP1Q8IZL8 1130 aaKnown RBP19.68■□□□□ 0.74
LINC01106-202ENST00000448359 BICRAQ9NZM4 1560 aa19.6■□□□□ 0.73
LINC01106-202ENST00000448359 PABPN1Q86U42 306 aaKnown RBP eCLIP19.58■□□□□ 0.72
LINC01106-202ENST00000448359 SOGA1O94964 1423 aa19.56■□□□□ 0.72
LINC01106-202ENST00000448359 CEP162Q5TB80 1403 aa19.53■□□□□ 0.72
LINC01106-202ENST00000448359 EEA1Q15075 1411 aa19.49■□□□□ 0.71
LINC01106-202ENST00000448359 PEG3Q9GZU2 1588 aa19.49■□□□□ 0.71
LINC01106-202ENST00000448359 WRNQ14191 1432 aaPredicted RBP eCLIP19.49■□□□□ 0.71
LINC01106-202ENST00000448359 TNIKQ9UKE5 1360 aa19.46■□□□□ 0.71
LINC01106-202ENST00000448359 RUSC2Q8N2Y8 1516 aa19.46■□□□□ 0.71
LINC01106-202ENST00000448359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.45■□□□□ 0.7
LINC01106-202ENST00000448359 TTBK1Q5TCY1 1321 aaPredicted RBP19.44■□□□□ 0.7
LINC01106-202ENST00000448359 CSRNP3Q8WYN3 585 aa19.43■□□□□ 0.7
LINC01106-202ENST00000448359 CCER1Q8TC90 406 aaPredicted RBP19.42■□□□□ 0.7
LINC01106-202ENST00000448359 UBTFP17480 764 aaKnown RBP19.4■□□□□ 0.7
LINC01106-202ENST00000448359 GOLGA3Q08378 1498 aa19.39■□□□□ 0.69
LINC01106-202ENST00000448359 SCAF1Q9H7N4 1312 aaKnown RBP19.38■□□□□ 0.69
LINC01106-202ENST00000448359 SYNJ1O43426 1573 aa19.35■□□□□ 0.69
LINC01106-202ENST00000448359 ATAD2BQ9ULI0 1458 aa19.33■□□□□ 0.68
LINC01106-202ENST00000448359 BAZ1BQ9UIG0 1483 aaKnown RBP19.32■□□□□ 0.68
LINC01106-202ENST00000448359 CEP164Q9UPV0 1460 aa19.27■□□□□ 0.67
LINC01106-202ENST00000448359 KIF21BO75037 1637 aa19.27■□□□□ 0.67
LINC01106-202ENST00000448359 CLIP1P30622 1438 aa19.15■□□□□ 0.66
LINC01106-202ENST00000448359 TOP2BQ02880 1626 aa19.11■□□□□ 0.65
LINC01106-202ENST00000448359 RAPGEF2Q9Y4G8 1499 aa19.11■□□□□ 0.65
LINC01106-202ENST00000448359 VPS8Q8N3P4 1428 aa19.08■□□□□ 0.64
LINC01106-202ENST00000448359 BIVM-ERCC5R4GMW8 1640 aa19.06■□□□□ 0.64
LINC01106-202ENST00000448359 DIEXFQ68CQ4 756 aaKnown RBP19.05■□□□□ 0.64
LINC01106-202ENST00000448359 RANGAP1P46060 587 aaPredicted RBP19.02■□□□□ 0.64
LINC01106-202ENST00000448359 APLP2Q06481 763 aa19.01■□□□□ 0.63
LINC01106-202ENST00000448359 HNRNPUL2Q1KMD3 747 aaKnown RBP18.99■□□□□ 0.63
LINC01106-202ENST00000448359 HMGXB3Q12766 1538 aa18.99■□□□□ 0.63
LINC01106-202ENST00000448359 ERICH3Q5RHP9 1530 aa18.94■□□□□ 0.62
LINC01106-202ENST00000448359 NCAPD3P42695 1498 aa18.92■□□□□ 0.62
LINC01106-202ENST00000448359 ACIN1Q9UKV3 1341 aaKnown RBP18.9■□□□□ 0.62
LINC01106-202ENST00000448359 CUX1P39880 1505 aa18.89■□□□□ 0.62
LINC01106-202ENST00000448359 MYT1Q01538 1121 aa18.89■□□□□ 0.61
LINC01106-202ENST00000448359 PRXQ9BXM0 1461 aa18.89■□□□□ 0.61
LINC01106-202ENST00000448359 ZNF316A6NFI3 1004 aaPredicted RBP18.88■□□□□ 0.61
LINC01106-202ENST00000448359 NEUROD1Q13562 356 aa18.88■□□□□ 0.61
LINC01106-202ENST00000448359 CENPBP07199 599 aaPredicted RBP18.84■□□□□ 0.61
LINC01106-202ENST00000448359 ARAP1Q96P48 1450 aa18.83■□□□□ 0.61
LINC01106-202ENST00000448359 KIF27Q86VH2 1401 aa18.82■□□□□ 0.6
LINC01106-202ENST00000448359 CFTRP13569 1480 aa18.81■□□□□ 0.6
LINC01106-202ENST00000448359 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
LINC01106-202ENST00000448359 GTF3C3Q9Y5Q9 886 aa18.77■□□□□ 0.6
LINC01106-202ENST00000448359 KANK4Q5T7N3 995 aaPredicted RBP18.7■□□□□ 0.58
LINC01106-202ENST00000448359 ARHGAP35Q9NRY4 1499 aa18.66■□□□□ 0.58
LINC01106-202ENST00000448359 YTHDC1Q96MU7 727 aaKnown RBP18.64■□□□□ 0.57
LINC01106-202ENST00000448359 CUX2O14529 1486 aa18.64■□□□□ 0.57
LINC01106-202ENST00000448359 DHX57Q6P158 1386 aaKnown RBP18.62■□□□□ 0.57
LINC01106-202ENST00000448359 RRBP1Q9P2E9 1410 aaKnown RBP18.62■□□□□ 0.57
LINC01106-202ENST00000448359 MIER1Q8N108 512 aa18.61■□□□□ 0.57
LINC01106-202ENST00000448359 CLSPNQ9HAW4 1339 aa18.6■□□□□ 0.57
LINC01106-202ENST00000448359 CADPSQ9ULU8 1353 aa18.58■□□□□ 0.56
LINC01106-202ENST00000448359 FGD5Q6ZNL6 1462 aa18.57■□□□□ 0.56
LINC01106-202ENST00000448359 IGF1RP08069 1367 aa18.55■□□□□ 0.56
LINC01106-202ENST00000448359 CCNB3Q8WWL7 1395 aa18.55■□□□□ 0.56
LINC01106-202ENST00000448359 CARMIL1Q5VZK9 1371 aa18.51■□□□□ 0.55
LINC01106-202ENST00000448359 TIAM1Q13009 1591 aa18.51■□□□□ 0.55
LINC01106-202ENST00000448359 ITGAEP38570 1179 aa18.49■□□□□ 0.55
LINC01106-202ENST00000448359 CC2D2AQ9P2K1 1620 aa18.49■□□□□ 0.55
LINC01106-202ENST00000448359 MAP3K1Q13233 1512 aa18.44■□□□□ 0.54
LINC01106-202ENST00000448359 FANCD2Q9BXW9 1451 aa18.43■□□□□ 0.54
LINC01106-202ENST00000448359 LRRC9Q6ZRR7 1453 aa18.4■□□□□ 0.54
LINC01106-202ENST00000448359 CFAP43Q8NDM7 1665 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms