RNA–Protein interactions for RNA: ENST00000446609.6

PLEKHM1-202, Transcript of pleckstrin homology and RUN domain containing M1, humanhuman

TSL 5

Gene PLEKHM1, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLEKHM1-202ENST00000446609 NISCHQ9Y2I1 1504 aa32.82■■■□□ 2.84
PLEKHM1-202ENST00000446609 SHROOM4Q9ULL8 1493 aa27.96■■■□□ 2.07
PLEKHM1-202ENST00000446609 CCDC180Q9P1Z9 1646 aa27.88■■■□□ 2.05
PLEKHM1-202ENST00000446609 ZCCHC6Q5VYS8 1495 aaKnown RBP27.78■■■□□ 2.04
PLEKHM1-202ENST00000446609 SUPT5HO00267 1087 aaKnown RBP27.39■■□□□ 1.98
PLEKHM1-202ENST00000446609 DCAF8L2P0C7V8 631 aa27.12■■□□□ 1.93
PLEKHM1-202ENST00000446609 DCAF1Q9Y4B6 1507 aa26.92■■□□□ 1.9
PLEKHM1-202ENST00000446609 CHIC1Q5VXU3 224 aa26.67■■□□□ 1.86
PLEKHM1-202ENST00000446609 MYO15BQ96JP2 1530 aa26.64■■□□□ 1.86
PLEKHM1-202ENST00000446609 ABCC9O60706 1549 aa26.22■■□□□ 1.79
PLEKHM1-202ENST00000446609 SCRIBQ14160 1630 aa26.15■■□□□ 1.78
PLEKHM1-202ENST00000446609 RSF1Q96T23 1441 aaPredicted RBP25.98■■□□□ 1.75
PLEKHM1-202ENST00000446609 LOC105371045A0A1W2PR82 267 aa25.88■■□□□ 1.73
PLEKHM1-202ENST00000446609 HRCP23327 699 aa25.84■■□□□ 1.73
PLEKHM1-202ENST00000446609 PCGF6Q9BYE7 350 aa25.83■■□□□ 1.73
PLEKHM1-202ENST00000446609 NACADO15069 1562 aa25.76■■□□□ 1.71
PLEKHM1-202ENST00000446609 RB1CC1Q8TDY2 1594 aa25.74■■□□□ 1.71
PLEKHM1-202ENST00000446609 CECR2Q9BXF3 1484 aa25.62■■□□□ 1.69
PLEKHM1-202ENST00000446609 MROH2BQ7Z745 1585 aa25.53■■□□□ 1.68
PLEKHM1-202ENST00000446609 TRIM41Q8WV44 630 aa25.5■■□□□ 1.67
PLEKHM1-202ENST00000446609 WIZO95785 1651 aa25.39■■□□□ 1.66
PLEKHM1-202ENST00000446609 PPARGC1BQ86YN6 1023 aaKnown RBP25.34■■□□□ 1.65
PLEKHM1-202ENST00000446609 TRIM26Q12899 539 aaPredicted RBP25.32■■□□□ 1.64
PLEKHM1-202ENST00000446609 FAM9AQ8IZU1 332 aaPredicted RBP25.31■■□□□ 1.64
PLEKHM1-202ENST00000446609 BAZ1AQ9NRL2 1556 aaPredicted RBP25.22■■□□□ 1.63
PLEKHM1-202ENST00000446609 EIF4G1Q04637 1599 aaKnown RBP25.1■■□□□ 1.61
PLEKHM1-202ENST00000446609 EHMT2Q96KQ7 1210 aa25.09■■□□□ 1.61
PLEKHM1-202ENST00000446609 UNC13AQ9UPW8 1703 aa25.02■■□□□ 1.6
PLEKHM1-202ENST00000446609 SMARCA4P51532 1647 aa24.99■■□□□ 1.59
PLEKHM1-202ENST00000446609 TOP2AP11388 1531 aaKnown RBP24.97■■□□□ 1.59
PLEKHM1-202ENST00000446609 CCDC88BA6NC98 1476 aa24.88■■□□□ 1.57
PLEKHM1-202ENST00000446609 SMARCA2P51531 1590 aa24.86■■□□□ 1.57
PLEKHM1-202ENST00000446609 ABCC8Q09428 1581 aa24.84■■□□□ 1.57
PLEKHM1-202ENST00000446609 BICRAQ9NZM4 1560 aa24.72■■□□□ 1.55
PLEKHM1-202ENST00000446609 ZEB1P37275 1124 aaPredicted RBP24.7■■□□□ 1.54
PLEKHM1-202ENST00000446609 PABPN1Q86U42 306 aaKnown RBP eCLIP24.68■■□□□ 1.54
PLEKHM1-202ENST00000446609 SOGA1O94964 1423 aa24.6■■□□□ 1.53
PLEKHM1-202ENST00000446609 PEG3Q9GZU2 1588 aa24.53■■□□□ 1.52
PLEKHM1-202ENST00000446609 RUSC2Q8N2Y8 1516 aa24.49■■□□□ 1.51
PLEKHM1-202ENST00000446609 CEP162Q5TB80 1403 aa24.47■■□□□ 1.51
PLEKHM1-202ENST00000446609 WRNQ14191 1432 aaPredicted RBP eCLIP24.45■■□□□ 1.5
PLEKHM1-202ENST00000446609 EEA1Q15075 1411 aa24.41■■□□□ 1.5
PLEKHM1-202ENST00000446609 TNIKQ9UKE5 1360 aa24.41■■□□□ 1.5
PLEKHM1-202ENST00000446609 CSRNP3Q8WYN3 585 aa24.4■■□□□ 1.5
PLEKHM1-202ENST00000446609 ATAD2BQ9ULI0 1458 aa24.35■■□□□ 1.49
PLEKHM1-202ENST00000446609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.34■■□□□ 1.49
PLEKHM1-202ENST00000446609 SYNJ1O43426 1573 aa24.3■■□□□ 1.48
PLEKHM1-202ENST00000446609 TTBK1Q5TCY1 1321 aaPredicted RBP24.29■■□□□ 1.48
PLEKHM1-202ENST00000446609 UBTFP17480 764 aaKnown RBP24.28■■□□□ 1.48
PLEKHM1-202ENST00000446609 GOLGA3Q08378 1498 aa24.27■■□□□ 1.48
PLEKHM1-202ENST00000446609 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
PLEKHM1-202ENST00000446609 CCER1Q8TC90 406 aaPredicted RBP24.22■■□□□ 1.47
PLEKHM1-202ENST00000446609 CEP164Q9UPV0 1460 aa24.13■■□□□ 1.45
PLEKHM1-202ENST00000446609 KIF21BO75037 1637 aa24.12■■□□□ 1.45
PLEKHM1-202ENST00000446609 RAPGEF2Q9Y4G8 1499 aa24■■□□□ 1.43
PLEKHM1-202ENST00000446609 CLIP1P30622 1438 aa23.99■■□□□ 1.43
PLEKHM1-202ENST00000446609 TOP2BQ02880 1626 aa23.98■■□□□ 1.43
PLEKHM1-202ENST00000446609 VPS8Q8N3P4 1428 aa23.91■■□□□ 1.42
PLEKHM1-202ENST00000446609 BIVM-ERCC5R4GMW8 1640 aa23.89■■□□□ 1.42
PLEKHM1-202ENST00000446609 HMGXB3Q12766 1538 aa23.86■■□□□ 1.41
PLEKHM1-202ENST00000446609 NCAPD3P42695 1498 aa23.86■■□□□ 1.41
PLEKHM1-202ENST00000446609 SCAF1Q9H7N4 1312 aaKnown RBP23.83■■□□□ 1.4
PLEKHM1-202ENST00000446609 RANGAP1P46060 587 aaPredicted RBP23.8■■□□□ 1.4
PLEKHM1-202ENST00000446609 PRXQ9BXM0 1461 aa23.76■■□□□ 1.39
PLEKHM1-202ENST00000446609 DIEXFQ68CQ4 756 aaKnown RBP23.76■■□□□ 1.39
PLEKHM1-202ENST00000446609 CUX1P39880 1505 aa23.76■■□□□ 1.39
PLEKHM1-202ENST00000446609 HNRNPUL2Q1KMD3 747 aaKnown RBP23.76■■□□□ 1.39
PLEKHM1-202ENST00000446609 ERICH3Q5RHP9 1530 aa23.73■■□□□ 1.39
PLEKHM1-202ENST00000446609 CFTRP13569 1480 aa23.69■■□□□ 1.38
PLEKHM1-202ENST00000446609 APLP2Q06481 763 aa23.68■■□□□ 1.38
PLEKHM1-202ENST00000446609 ARAP1Q96P48 1450 aa23.65■■□□□ 1.38
PLEKHM1-202ENST00000446609 KIF27Q86VH2 1401 aa23.6■■□□□ 1.37
PLEKHM1-202ENST00000446609 ZNF316A6NFI3 1004 aaPredicted RBP23.58■■□□□ 1.37
PLEKHM1-202ENST00000446609 NEUROD1Q13562 356 aa23.58■■□□□ 1.36
PLEKHM1-202ENST00000446609 ACIN1Q9UKV3 1341 aaKnown RBP23.57■■□□□ 1.36
PLEKHM1-202ENST00000446609 KANK4Q5T7N3 995 aaPredicted RBP23.51■■□□□ 1.35
PLEKHM1-202ENST00000446609 PRDM2Q13029 1718 aa23.47■■□□□ 1.35
PLEKHM1-202ENST00000446609 ARHGAP35Q9NRY4 1499 aa23.44■■□□□ 1.34
PLEKHM1-202ENST00000446609 CUX2O14529 1486 aa23.4■■□□□ 1.34
PLEKHM1-202ENST00000446609 CADPSQ9ULU8 1353 aa23.39■■□□□ 1.34
PLEKHM1-202ENST00000446609 IGF1RP08069 1367 aa23.38■■□□□ 1.33
PLEKHM1-202ENST00000446609 CENPBP07199 599 aaPredicted RBP23.37■■□□□ 1.33
PLEKHM1-202ENST00000446609 RRBP1Q9P2E9 1410 aaKnown RBP23.36■■□□□ 1.33
PLEKHM1-202ENST00000446609 DHX57Q6P158 1386 aaKnown RBP23.35■■□□□ 1.33
PLEKHM1-202ENST00000446609 FGD5Q6ZNL6 1462 aa23.32■■□□□ 1.32
PLEKHM1-202ENST00000446609 GTF3C3Q9Y5Q9 886 aa23.3■■□□□ 1.32
PLEKHM1-202ENST00000446609 MIER1Q8N108 512 aa23.28■■□□□ 1.32
PLEKHM1-202ENST00000446609 CLSPNQ9HAW4 1339 aa23.27■■□□□ 1.32
PLEKHM1-202ENST00000446609 CC2D2AQ9P2K1 1620 aa23.26■■□□□ 1.31
PLEKHM1-202ENST00000446609 CARMIL1Q5VZK9 1371 aa23.25■■□□□ 1.31
PLEKHM1-202ENST00000446609 CCNB3Q8WWL7 1395 aa23.24■■□□□ 1.31
PLEKHM1-202ENST00000446609 YTHDC1Q96MU7 727 aaKnown RBP23.2■■□□□ 1.3
PLEKHM1-202ENST00000446609 FANCD2Q9BXW9 1451 aa23.18■■□□□ 1.3
PLEKHM1-202ENST00000446609 TIAM1Q13009 1591 aa23.17■■□□□ 1.3
PLEKHM1-202ENST00000446609 PELP1Q8IZL8 1130 aaKnown RBP23.16■■□□□ 1.3
PLEKHM1-202ENST00000446609 MAP3K1Q13233 1512 aa23.13■■□□□ 1.29
PLEKHM1-202ENST00000446609 ITGAEP38570 1179 aa23.12■■□□□ 1.29
PLEKHM1-202ENST00000446609 RAD54L2Q9Y4B4 1467 aa23.1■■□□□ 1.29
PLEKHM1-202ENST00000446609 LRRC9Q6ZRR7 1453 aa23.08■■□□□ 1.29
PLEKHM1-202ENST00000446609 DNMBPQ6XZF7 1577 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms