RNA–Protein interactions for RNA: ENST00000446314.1

LINC00333-201, long intergenic non-protein coding RNA 333, humanhuman

TSL 5 BASIC

Gene LINC00333, Length 613 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00333-201ENST00000446314 AEBP2Q6ZN18 517 aaPredicted RBP30.28■■■□□ 2.44
LINC00333-201ENST00000446314 CHIC1Q5VXU3 224 aa29.42■■■□□ 2.3
LINC00333-201ENST00000446314 SENP3Q9H4L4 574 aaPredicted RBP25.85■■□□□ 1.73
LINC00333-201ENST00000446314 PHF23Q9BUL5 403 aaPredicted RBP25.78■■□□□ 1.72
LINC00333-201ENST00000446314 NISCHQ9Y2I1 1504 aa24.6■■□□□ 1.53
LINC00333-201ENST00000446314 FOXD1Q16676 465 aa23.93■■□□□ 1.42
LINC00333-201ENST00000446314 PLPPR3Q6T4P5 718 aa23.82■■□□□ 1.4
LINC00333-201ENST00000446314 PPP6R1Q9UPN7 881 aa22.8■■□□□ 1.24
LINC00333-201ENST00000446314 ADRA2BP18089 450 aa22.78■■□□□ 1.24
LINC00333-201ENST00000446314 PIAS4Q8N2W9 510 aaPredicted RBP22.55■■□□□ 1.2
LINC00333-201ENST00000446314 MSH5O43196 834 aa22.26■■□□□ 1.15
LINC00333-201ENST00000446314 ABCC9O60706 1549 aa22.03■■□□□ 1.12
LINC00333-201ENST00000446314 CCDC180Q9P1Z9 1646 aa21.92■■□□□ 1.1
LINC00333-201ENST00000446314 SCAF1Q9H7N4 1312 aaKnown RBP20.97■□□□□ 0.95
LINC00333-201ENST00000446314 PPP4R3CPQ6ZMV5 832 aa20.91■□□□□ 0.94
LINC00333-201ENST00000446314 RB1CC1Q8TDY2 1594 aa20.85■□□□□ 0.93
LINC00333-201ENST00000446314 DNAJC5BQ9UF47 199 aa20.81■□□□□ 0.92
LINC00333-201ENST00000446314 NACADO15069 1562 aa20.75■□□□□ 0.91
LINC00333-201ENST00000446314 DCAF8L2P0C7V8 631 aa20.74■□□□□ 0.91
LINC00333-201ENST00000446314 MAPK8IP2Q13387 824 aaPredicted RBP20.71■□□□□ 0.91
LINC00333-201ENST00000446314 POTEDQ86YR6 584 aa20.6■□□□□ 0.89
LINC00333-201ENST00000446314 PABPN1Q86U42 306 aaKnown RBP eCLIP20.58■□□□□ 0.89
LINC00333-201ENST00000446314 DMRT2Q9Y5R5 561 aa20.57■□□□□ 0.88
LINC00333-201ENST00000446314 MYO15BQ96JP2 1530 aa20.49■□□□□ 0.87
LINC00333-201ENST00000446314 UNC13AQ9UPW8 1703 aa20.49■□□□□ 0.87
LINC00333-201ENST00000446314 BICRAQ9NZM4 1560 aa20.42■□□□□ 0.86
LINC00333-201ENST00000446314 CNKSR2Q8WXI2 1034 aa20.42■□□□□ 0.86
LINC00333-201ENST00000446314 ZCCHC6Q5VYS8 1495 aaKnown RBP20.39■□□□□ 0.85
LINC00333-201ENST00000446314 NCBP3Q53F19 620 aaKnown RBP20.36■□□□□ 0.85
LINC00333-201ENST00000446314 DCAF1Q9Y4B6 1507 aa20.27■□□□□ 0.83
LINC00333-201ENST00000446314 KCNA4P22459 653 aa20.13■□□□□ 0.81
LINC00333-201ENST00000446314 RNF216Q9NWF9 866 aaPredicted RBP20.08■□□□□ 0.81
LINC00333-201ENST00000446314 SCRIBQ14160 1630 aa20.08■□□□□ 0.8
LINC00333-201ENST00000446314 HOXD11P31277 338 aaPredicted RBP20.06■□□□□ 0.8
LINC00333-201ENST00000446314 NPM3O75607 178 aaKnown RBP20■□□□□ 0.79
LINC00333-201ENST00000446314 SHROOM4Q9ULL8 1493 aa19.92■□□□□ 0.78
LINC00333-201ENST00000446314 CC2D2AQ9P2K1 1620 aa19.87■□□□□ 0.77
LINC00333-201ENST00000446314 EIF4G1Q04637 1599 aaKnown RBP19.83■□□□□ 0.76
LINC00333-201ENST00000446314 CECR2Q9BXF3 1484 aa19.79■□□□□ 0.76
LINC00333-201ENST00000446314 DCAF8L1A6NGE4 600 aa19.65■□□□□ 0.74
LINC00333-201ENST00000446314 NCAPD3P42695 1498 aa19.23■□□□□ 0.67
LINC00333-201ENST00000446314 ATAD2BQ9ULI0 1458 aa19.21■□□□□ 0.67
LINC00333-201ENST00000446314 SLC4A1APQ9BWU0 796 aaKnown RBP19.17■□□□□ 0.66
LINC00333-201ENST00000446314 SMARCA4P51532 1647 aa19.15■□□□□ 0.66
LINC00333-201ENST00000446314 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.1■□□□□ 0.65
LINC00333-201ENST00000446314 SMARCA2P51531 1590 aa19.03■□□□□ 0.64
LINC00333-201ENST00000446314 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
LINC00333-201ENST00000446314 MROH2BQ7Z745 1585 aa19.02■□□□□ 0.63
LINC00333-201ENST00000446314 BAZ1AQ9NRL2 1556 aaPredicted RBP19.01■□□□□ 0.63
LINC00333-201ENST00000446314 RNF39Q9H2S5 420 aa19■□□□□ 0.63
LINC00333-201ENST00000446314 NESP48681 1621 aa19■□□□□ 0.63
LINC00333-201ENST00000446314 PEG3Q9GZU2 1588 aa18.97■□□□□ 0.63
LINC00333-201ENST00000446314 BAZ1BQ9UIG0 1483 aaKnown RBP18.94■□□□□ 0.62
LINC00333-201ENST00000446314 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
LINC00333-201ENST00000446314 DNAJC5Q9H3Z4 198 aa18.91■□□□□ 0.62
LINC00333-201ENST00000446314 ERCC6Q03468 1493 aa18.89■□□□□ 0.61
LINC00333-201ENST00000446314 CUX2O14529 1486 aa18.85■□□□□ 0.61
LINC00333-201ENST00000446314 C1QBPQ07021 282 aaKnown RBP18.8■□□□□ 0.6
LINC00333-201ENST00000446314 WIZO95785 1651 aa18.76■□□□□ 0.59
LINC00333-201ENST00000446314 U3KPZ7 1027 aaPredicted RBP18.75■□□□□ 0.59
LINC00333-201ENST00000446314 LAMC3Q9Y6N6 1575 aa18.71■□□□□ 0.59
LINC00333-201ENST00000446314 THOC2Q8NI27 1593 aaKnown RBP18.7■□□□□ 0.58
LINC00333-201ENST00000446314 CACNB1Q02641 598 aaPredicted RBP18.67■□□□□ 0.58
LINC00333-201ENST00000446314 FOXD4L1Q9NU39 408 aa18.67■□□□□ 0.58
LINC00333-201ENST00000446314 KIF21AQ7Z4S6 1674 aa18.65■□□□□ 0.58
LINC00333-201ENST00000446314 CADPSQ9ULU8 1353 aa18.65■□□□□ 0.58
LINC00333-201ENST00000446314 RSF1Q96T23 1441 aaPredicted RBP18.64■□□□□ 0.57
LINC00333-201ENST00000446314 PDS5BQ9NTI5 1447 aa18.59■□□□□ 0.57
LINC00333-201ENST00000446314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
LINC00333-201ENST00000446314 MYCNP04198 464 aaPredicted RBP18.54■□□□□ 0.56
LINC00333-201ENST00000446314 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
LINC00333-201ENST00000446314 ZBTB22O15209 634 aa18.5■□□□□ 0.55
LINC00333-201ENST00000446314 MRC2Q9UBG0 1479 aa18.46■□□□□ 0.55
LINC00333-201ENST00000446314 CFTRP13569 1480 aa18.46■□□□□ 0.54
LINC00333-201ENST00000446314 TOP2AP11388 1531 aaKnown RBP18.45■□□□□ 0.54
LINC00333-201ENST00000446314 WDR62O43379 1518 aa18.44■□□□□ 0.54
LINC00333-201ENST00000446314 SAMD1Q6SPF0 538 aaPredicted RBP18.43■□□□□ 0.54
LINC00333-201ENST00000446314 FANCD2Q9BXW9 1451 aa18.42■□□□□ 0.54
LINC00333-201ENST00000446314 APLP2Q06481 763 aa18.42■□□□□ 0.54
LINC00333-201ENST00000446314 CEP164Q9UPV0 1460 aa18.38■□□□□ 0.53
LINC00333-201ENST00000446314 CCDC88BA6NC98 1476 aa18.33■□□□□ 0.53
LINC00333-201ENST00000446314 URB2Q14146 1524 aaKnown RBP18.33■□□□□ 0.52
LINC00333-201ENST00000446314 EHMT2Q96KQ7 1210 aa18.3■□□□□ 0.52
LINC00333-201ENST00000446314 SPINK5Q9NQ38 1064 aaPredicted RBP18.25■□□□□ 0.51
LINC00333-201ENST00000446314 CAPN15O75808 1086 aa18.24■□□□□ 0.51
LINC00333-201ENST00000446314 CSRNP3Q8WYN3 585 aa18.21■□□□□ 0.51
LINC00333-201ENST00000446314 ZNF219Q9P2Y4 722 aaPredicted RBP18.15■□□□□ 0.5
LINC00333-201ENST00000446314 PRDM2Q13029 1718 aa18.14■□□□□ 0.49
LINC00333-201ENST00000446314 ZNF608Q9ULD9 1512 aaPredicted RBP18.12■□□□□ 0.49
LINC00333-201ENST00000446314 TOPBP1Q92547 1522 aa18.09■□□□□ 0.49
LINC00333-201ENST00000446314 TRHP20396 242 aaPredicted RBP18.08■□□□□ 0.48
LINC00333-201ENST00000446314 ATXN8OSP0DMR3 200 aa18.07■□□□□ 0.48
LINC00333-201ENST00000446314 TRIM41Q8WV44 630 aa18.06■□□□□ 0.48
LINC00333-201ENST00000446314 OSCARQ8IYS5 282 aa18.05■□□□□ 0.48
LINC00333-201ENST00000446314 IFT140Q96RY7 1462 aa18.02■□□□□ 0.48
LINC00333-201ENST00000446314 DSG3P32926 999 aa17.98■□□□□ 0.47
LINC00333-201ENST00000446314 DNMBPQ6XZF7 1577 aa17.98■□□□□ 0.47
LINC00333-201ENST00000446314 ATF5Q9Y2D1 282 aaPredicted RBP17.95■□□□□ 0.46
LINC00333-201ENST00000446314 AQRO60306 1485 aaKnown RBP eCLIP17.94■□□□□ 0.46
LINC00333-201ENST00000446314 TARBP1Q13395 1621 aaKnown RBP17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms