RNA–Protein interactions for RNA: ENST00000445201.2

LINC01138-203, Transcript of long intergenic non-protein coding RNA 1138, humanhuman

TSL 5

Gene LINC01138, Length 1,143 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01138-203ENST00000445201 AEBP2Q6ZN18 517 aaPredicted RBP27.27■■□□□ 1.96
LINC01138-203ENST00000445201 CHIC1Q5VXU3 224 aa25.44■■□□□ 1.66
LINC01138-203ENST00000445201 SENP3Q9H4L4 574 aaPredicted RBP23.33■■□□□ 1.33
LINC01138-203ENST00000445201 PHF23Q9BUL5 403 aaPredicted RBP22.93■■□□□ 1.26
LINC01138-203ENST00000445201 FOXD1Q16676 465 aa21.81■■□□□ 1.08
LINC01138-203ENST00000445201 POTEDQ86YR6 584 aa21.05■□□□□ 0.96
LINC01138-203ENST00000445201 MSH5O43196 834 aa20.62■□□□□ 0.89
LINC01138-203ENST00000445201 PIAS4Q8N2W9 510 aaPredicted RBP20.21■□□□□ 0.83
LINC01138-203ENST00000445201 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
LINC01138-203ENST00000445201 PPP6R1Q9UPN7 881 aa19.98■□□□□ 0.79
LINC01138-203ENST00000445201 ADRA2BP18089 450 aa19.85■□□□□ 0.77
LINC01138-203ENST00000445201 NISCHQ9Y2I1 1504 aa18.59■□□□□ 0.57
LINC01138-203ENST00000445201 DMRT2Q9Y5R5 561 aa18.43■□□□□ 0.54
LINC01138-203ENST00000445201 MAPK8IP2Q13387 824 aaPredicted RBP18.39■□□□□ 0.53
LINC01138-203ENST00000445201 SCAF1Q9H7N4 1312 aaKnown RBP18.16■□□□□ 0.5
LINC01138-203ENST00000445201 ABCC9O60706 1549 aa18.07■□□□□ 0.48
LINC01138-203ENST00000445201 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
LINC01138-203ENST00000445201 DNAJC5BQ9UF47 199 aa17.89■□□□□ 0.45
LINC01138-203ENST00000445201 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
LINC01138-203ENST00000445201 RNF39Q9H2S5 420 aa17.57■□□□□ 0.4
LINC01138-203ENST00000445201 HOXD11P31277 338 aaPredicted RBP17.56■□□□□ 0.4
LINC01138-203ENST00000445201 PPP4R3CPQ6ZMV5 832 aa17.45■□□□□ 0.38
LINC01138-203ENST00000445201 C1QBPQ07021 282 aaKnown RBP17.27■□□□□ 0.36
LINC01138-203ENST00000445201 CNKSR2Q8WXI2 1034 aa17.26■□□□□ 0.35
LINC01138-203ENST00000445201 RNF216Q9NWF9 866 aaPredicted RBP17.26■□□□□ 0.35
LINC01138-203ENST00000445201 CCDC180Q9P1Z9 1646 aa17.01■□□□□ 0.31
LINC01138-203ENST00000445201 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
LINC01138-203ENST00000445201 PABPN1Q86U42 306 aaKnown RBP eCLIP16.72■□□□□ 0.27
LINC01138-203ENST00000445201 RB1CC1Q8TDY2 1594 aa16.67■□□□□ 0.26
LINC01138-203ENST00000445201 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.64■□□□□ 0.25
LINC01138-203ENST00000445201 NCBP3Q53F19 620 aaKnown RBP16.59■□□□□ 0.25
LINC01138-203ENST00000445201 NPM3O75607 178 aaKnown RBP16.39■□□□□ 0.21
LINC01138-203ENST00000445201 POTEHQ6S545 545 aa16.38■□□□□ 0.21
LINC01138-203ENST00000445201 UNC13AQ9UPW8 1703 aa16.36■□□□□ 0.21
LINC01138-203ENST00000445201 CECR2Q9BXF3 1484 aa16.34■□□□□ 0.21
LINC01138-203ENST00000445201 BICRAQ9NZM4 1560 aa16.34■□□□□ 0.21
LINC01138-203ENST00000445201 NACADO15069 1562 aa16.32■□□□□ 0.2
LINC01138-203ENST00000445201 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
LINC01138-203ENST00000445201 DSG3P32926 999 aa16.25■□□□□ 0.19
LINC01138-203ENST00000445201 CC2D2AQ9P2K1 1620 aa16.23■□□□□ 0.19
LINC01138-203ENST00000445201 SPINK5Q9NQ38 1064 aaPredicted RBP16.19■□□□□ 0.18
LINC01138-203ENST00000445201 CAPN15O75808 1086 aa16.14■□□□□ 0.17
LINC01138-203ENST00000445201 DCAF8L2P0C7V8 631 aa16.14■□□□□ 0.17
LINC01138-203ENST00000445201 EIF4G1Q04637 1599 aaKnown RBP15.96■□□□□ 0.14
LINC01138-203ENST00000445201 TRIM41Q8WV44 630 aa15.9■□□□□ 0.14
LINC01138-203ENST00000445201 CUX2O14529 1486 aa15.86■□□□□ 0.13
LINC01138-203ENST00000445201 SHROOM4Q9ULL8 1493 aa15.84■□□□□ 0.13
LINC01138-203ENST00000445201 KCNA4P22459 653 aa15.83■□□□□ 0.12
LINC01138-203ENST00000445201 SLC4A2P04920 1241 aa15.81■□□□□ 0.12
LINC01138-203ENST00000445201 ZNF219Q9P2Y4 722 aaPredicted RBP15.76■□□□□ 0.11
LINC01138-203ENST00000445201 MYO15BQ96JP2 1530 aa15.75■□□□□ 0.11
LINC01138-203ENST00000445201 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
LINC01138-203ENST00000445201 APLP2Q06481 763 aa15.74■□□□□ 0.11
LINC01138-203ENST00000445201 ABCB7O75027 752 aa15.73■□□□□ 0.11
LINC01138-203ENST00000445201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.61■□□□□ 0.09
LINC01138-203ENST00000445201 HNRNPUL2Q1KMD3 747 aaKnown RBP15.61■□□□□ 0.09
LINC01138-203ENST00000445201 ERCC6Q03468 1493 aa15.59■□□□□ 0.09
LINC01138-203ENST00000445201 SCRIBQ14160 1630 aa15.55■□□□□ 0.08
LINC01138-203ENST00000445201 SAMD1Q6SPF0 538 aaPredicted RBP15.5■□□□□ 0.07
LINC01138-203ENST00000445201 RBM42Q9BTD8 480 aaKnown RBP15.5■□□□□ 0.07
LINC01138-203ENST00000445201 CHRDL2Q6WN34 429 aa15.38■□□□□ 0.05
LINC01138-203ENST00000445201 NESP48681 1621 aa15.28■□□□□ 0.04
LINC01138-203ENST00000445201 THOC2Q8NI27 1593 aaKnown RBP15.25■□□□□ 0.03
LINC01138-203ENST00000445201 POLA2Q14181 598 aa15.23■□□□□ 0.03
LINC01138-203ENST00000445201 DCAF1Q9Y4B6 1507 aa15.22■□□□□ 0.03
LINC01138-203ENST00000445201 ZCCHC6Q5VYS8 1495 aaKnown RBP15.2■□□□□ 0.02
LINC01138-203ENST00000445201 MYCNP04198 464 aaPredicted RBP15.17■□□□□ 0.02
LINC01138-203ENST00000445201 NCAPD3P42695 1498 aa15.12■□□□□ 0.01
LINC01138-203ENST00000445201 SP7Q8TDD2 431 aaPredicted RBP15.11■□□□□ 0.01
LINC01138-203ENST00000445201 SMARCA2P51531 1590 aa15.1■□□□□ 0.01
LINC01138-203ENST00000445201 SLC4A1APQ9BWU0 796 aaKnown RBP15.05■□□□□ -0
LINC01138-203ENST00000445201 AKT1S1Q96B36 256 aa15.04■□□□□ -0
LINC01138-203ENST00000445201 BAZ1AQ9NRL2 1556 aaPredicted RBP15.02■□□□□ -0
LINC01138-203ENST00000445201 OSCARQ8IYS5 282 aa15□□□□□ -0.01
LINC01138-203ENST00000445201 KIF21AQ7Z4S6 1674 aa15□□□□□ -0.01
LINC01138-203ENST00000445201 ATAD2BQ9ULI0 1458 aa14.96□□□□□ -0.01
LINC01138-203ENST00000445201 RIMBP3CA6NJZ7 1639 aa14.96□□□□□ -0.01
LINC01138-203ENST00000445201 RIMBP3BA6NNM3 1639 aa14.96□□□□□ -0.01
LINC01138-203ENST00000445201 RIMBP3Q9UFD9 1639 aa14.96□□□□□ -0.01
LINC01138-203ENST00000445201 PIP4P2Q8N4L2 257 aa14.91□□□□□ -0.02
LINC01138-203ENST00000445201 ZBTB12Q9Y330 459 aaPredicted RBP14.91□□□□□ -0.02
LINC01138-203ENST00000445201 REM2Q8IYK8 340 aaPredicted RBP14.89□□□□□ -0.03
LINC01138-203ENST00000445201 LAMC3Q9Y6N6 1575 aa14.89□□□□□ -0.03
LINC01138-203ENST00000445201 HMGXB3Q12766 1538 aa14.88□□□□□ -0.03
LINC01138-203ENST00000445201 ATF5Q9Y2D1 282 aaPredicted RBP14.86□□□□□ -0.03
LINC01138-203ENST00000445201 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.03
LINC01138-203ENST00000445201 MRC2Q9UBG0 1479 aa14.81□□□□□ -0.04
LINC01138-203ENST00000445201 WDR62O43379 1518 aa14.81□□□□□ -0.04
LINC01138-203ENST00000445201 ARHGEF11O15085 1522 aa14.8□□□□□ -0.04
LINC01138-203ENST00000445201 CYB5RLQ6IPT4 315 aa14.77□□□□□ -0.05
LINC01138-203ENST00000445201 FXR2P51116 673 aaKnown RBP eCLIP14.75□□□□□ -0.05
LINC01138-203ENST00000445201 PITPNM1O00562 1244 aa14.74□□□□□ -0.05
LINC01138-203ENST00000445201 ILDR1Q86SU0 546 aaPredicted RBP14.74□□□□□ -0.05
LINC01138-203ENST00000445201 BAZ1BQ9UIG0 1483 aaKnown RBP14.74□□□□□ -0.05
LINC01138-203ENST00000445201 HAX1O00165 279 aa14.73□□□□□ -0.05
LINC01138-203ENST00000445201 FOXD4L1Q9NU39 408 aa14.71□□□□□ -0.05
LINC01138-203ENST00000445201 SMARCA4P51532 1647 aa14.7□□□□□ -0.06
LINC01138-203ENST00000445201 ARAP1Q96P48 1450 aa14.63□□□□□ -0.07
LINC01138-203ENST00000445201 CADPSQ9ULU8 1353 aa14.61□□□□□ -0.07
LINC01138-203ENST00000445201 ZBTB22O15209 634 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms