RNA–Protein interactions for RNA: ENST00000442228.1

HCG25-219, Transcript of HLA complex group 25, humanhuman

TSL 5

Gene HCG25, Length 469 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG25-219ENST00000442228 AEBP2Q6ZN18 517 aaPredicted RBP16.69■□□□□ 0.26
HCG25-219ENST00000442228 CHIC1Q5VXU3 224 aa15.81■□□□□ 0.12
HCG25-219ENST00000442228 SENP3Q9H4L4 574 aaPredicted RBP14.21□□□□□ -0.13
HCG25-219ENST00000442228 PHF23Q9BUL5 403 aaPredicted RBP14.03□□□□□ -0.16
HCG25-219ENST00000442228 NISCHQ9Y2I1 1504 aa13.79□□□□□ -0.2
HCG25-219ENST00000442228 FOXD1Q16676 465 aa13.27□□□□□ -0.29
HCG25-219ENST00000442228 PLPPR3Q6T4P5 718 aa12.88□□□□□ -0.35
HCG25-219ENST00000442228 ABCC9O60706 1549 aa12.84□□□□□ -0.35
HCG25-219ENST00000442228 CCDC180Q9P1Z9 1646 aa12.55□□□□□ -0.4
HCG25-219ENST00000442228 MSH5O43196 834 aa12.41□□□□□ -0.42
HCG25-219ENST00000442228 PPP6R1Q9UPN7 881 aa12.38□□□□□ -0.43
HCG25-219ENST00000442228 PIAS4Q8N2W9 510 aaPredicted RBP12.35□□□□□ -0.43
HCG25-219ENST00000442228 ADRA2BP18089 450 aa12.32□□□□□ -0.44
HCG25-219ENST00000442228 DNAJC5BQ9UF47 199 aa12.25□□□□□ -0.45
HCG25-219ENST00000442228 POTEDQ86YR6 584 aa12.22□□□□□ -0.45
HCG25-219ENST00000442228 RB1CC1Q8TDY2 1594 aa12.09□□□□□ -0.47
HCG25-219ENST00000442228 DCAF8L2P0C7V8 631 aa11.91□□□□□ -0.5
HCG25-219ENST00000442228 PABPN1Q86U42 306 aaKnown RBP eCLIP11.91□□□□□ -0.5
HCG25-219ENST00000442228 NACADO15069 1562 aa11.91□□□□□ -0.5
HCG25-219ENST00000442228 UNC13AQ9UPW8 1703 aa11.9□□□□□ -0.5
HCG25-219ENST00000442228 BICRAQ9NZM4 1560 aa11.7□□□□□ -0.54
HCG25-219ENST00000442228 CC2D2AQ9P2K1 1620 aa11.6□□□□□ -0.55
HCG25-219ENST00000442228 CECR2Q9BXF3 1484 aa11.58□□□□□ -0.56
HCG25-219ENST00000442228 MYO15BQ96JP2 1530 aa11.58□□□□□ -0.56
HCG25-219ENST00000442228 DNAJC5Q9H3Z4 198 aa11.49□□□□□ -0.57
HCG25-219ENST00000442228 SHROOM4Q9ULL8 1493 aa11.48□□□□□ -0.57
HCG25-219ENST00000442228 EIF4G1Q04637 1599 aaKnown RBP11.46□□□□□ -0.57
HCG25-219ENST00000442228 SCRIBQ14160 1630 aa11.45□□□□□ -0.58
HCG25-219ENST00000442228 ZCCHC6Q5VYS8 1495 aaKnown RBP11.34□□□□□ -0.59
HCG25-219ENST00000442228 DCAF1Q9Y4B6 1507 aa11.34□□□□□ -0.59
HCG25-219ENST00000442228 MAPK8IP2Q13387 824 aaPredicted RBP11.33□□□□□ -0.6
HCG25-219ENST00000442228 PPP4R3CPQ6ZMV5 832 aa11.32□□□□□ -0.6
HCG25-219ENST00000442228 DMRT2Q9Y5R5 561 aa11.29□□□□□ -0.6
HCG25-219ENST00000442228 SCAF1Q9H7N4 1312 aaKnown RBP11.25□□□□□ -0.61
HCG25-219ENST00000442228 CUX2O14529 1486 aa11.15□□□□□ -0.62
HCG25-219ENST00000442228 ERCC6Q03468 1493 aa11.14□□□□□ -0.63
HCG25-219ENST00000442228 KCNA4P22459 653 aa11.13□□□□□ -0.63
HCG25-219ENST00000442228 NCBP3Q53F19 620 aaKnown RBP11.09□□□□□ -0.63
HCG25-219ENST00000442228 CNKSR2Q8WXI2 1034 aa11.03□□□□□ -0.64
HCG25-219ENST00000442228 NCAPD3P42695 1498 aa10.95□□□□□ -0.66
HCG25-219ENST00000442228 TRIM41Q8WV44 630 aa10.95□□□□□ -0.66
HCG25-219ENST00000442228 MYT1Q01538 1121 aa10.94□□□□□ -0.66
HCG25-219ENST00000442228 PELP1Q8IZL8 1130 aaKnown RBP10.94□□□□□ -0.66
HCG25-219ENST00000442228 NESP48681 1621 aa10.93□□□□□ -0.66
HCG25-219ENST00000442228 NPM3O75607 178 aaKnown RBP10.9□□□□□ -0.66
HCG25-219ENST00000442228 ATAD2BQ9ULI0 1458 aa10.89□□□□□ -0.67
HCG25-219ENST00000442228 SMARCA2P51531 1590 aa10.89□□□□□ -0.67
HCG25-219ENST00000442228 THOC2Q8NI27 1593 aaKnown RBP10.87□□□□□ -0.67
HCG25-219ENST00000442228 HMGXB3Q12766 1538 aa10.87□□□□□ -0.67
HCG25-219ENST00000442228 HOXD11P31277 338 aaPredicted RBP10.86□□□□□ -0.67
HCG25-219ENST00000442228 KIF21AQ7Z4S6 1674 aa10.85□□□□□ -0.67
HCG25-219ENST00000442228 SMARCA4P51532 1647 aa10.85□□□□□ -0.67
HCG25-219ENST00000442228 BAZ1BQ9UIG0 1483 aaKnown RBP10.82□□□□□ -0.68
HCG25-219ENST00000442228 LAMC3Q9Y6N6 1575 aa10.82□□□□□ -0.68
HCG25-219ENST00000442228 RNF216Q9NWF9 866 aaPredicted RBP10.81□□□□□ -0.68
HCG25-219ENST00000442228 PDS5BQ9NTI5 1447 aa10.75□□□□□ -0.69
HCG25-219ENST00000442228 BAZ1AQ9NRL2 1556 aaPredicted RBP10.75□□□□□ -0.69
HCG25-219ENST00000442228 DCAF8L1A6NGE4 600 aa10.74□□□□□ -0.69
HCG25-219ENST00000442228 PEG3Q9GZU2 1588 aa10.69□□□□□ -0.7
HCG25-219ENST00000442228 CACNB1Q02641 598 aaPredicted RBP10.67□□□□□ -0.7
HCG25-219ENST00000442228 MRC2Q9UBG0 1479 aa10.67□□□□□ -0.7
HCG25-219ENST00000442228 OSCARQ8IYS5 282 aa10.64□□□□□ -0.71
HCG25-219ENST00000442228 WDR62O43379 1518 aa10.63□□□□□ -0.71
HCG25-219ENST00000442228 MROH2BQ7Z745 1585 aa10.63□□□□□ -0.71
HCG25-219ENST00000442228 CADPSQ9ULU8 1353 aa10.63□□□□□ -0.71
HCG25-219ENST00000442228 TTBK1Q5TCY1 1321 aaPredicted RBP10.62□□□□□ -0.71
HCG25-219ENST00000442228 SLC4A1APQ9BWU0 796 aaKnown RBP10.62□□□□□ -0.71
HCG25-219ENST00000442228 RNF39Q9H2S5 420 aa10.62□□□□□ -0.71
HCG25-219ENST00000442228 CEP164Q9UPV0 1460 aa10.59□□□□□ -0.71
HCG25-219ENST00000442228 WIZO95785 1651 aa10.55□□□□□ -0.72
HCG25-219ENST00000442228 RIMBP3CA6NJZ7 1639 aa10.55□□□□□ -0.72
HCG25-219ENST00000442228 RIMBP3BA6NNM3 1639 aa10.55□□□□□ -0.72
HCG25-219ENST00000442228 RIMBP3Q9UFD9 1639 aa10.55□□□□□ -0.72
HCG25-219ENST00000442228 FANCD2Q9BXW9 1451 aa10.54□□□□□ -0.72
HCG25-219ENST00000442228 TRHP20396 242 aaPredicted RBP10.46□□□□□ -0.73
HCG25-219ENST00000442228 PRDM2Q13029 1718 aa10.45□□□□□ -0.74
HCG25-219ENST00000442228 URB2Q14146 1524 aaKnown RBP10.45□□□□□ -0.74
HCG25-219ENST00000442228 C1QBPQ07021 282 aaKnown RBP10.45□□□□□ -0.74
HCG25-219ENST00000442228 ARHGEF11O15085 1522 aa10.43□□□□□ -0.74
HCG25-219ENST00000442228 CFTRP13569 1480 aa10.43□□□□□ -0.74
HCG25-219ENST00000442228 CYB5RLQ6IPT4 315 aa10.43□□□□□ -0.74
HCG25-219ENST00000442228 CHD1O14646 1710 aa10.38□□□□□ -0.75
HCG25-219ENST00000442228 ZNF608Q9ULD9 1512 aaPredicted RBP10.38□□□□□ -0.75
HCG25-219ENST00000442228 IFT140Q96RY7 1462 aa10.36□□□□□ -0.75
HCG25-219ENST00000442228 EIF4G3O43432 1585 aaKnown RBP10.35□□□□□ -0.75
HCG25-219ENST00000442228 TOP2AP11388 1531 aaKnown RBP10.34□□□□□ -0.75
HCG25-219ENST00000442228 FBLN2P98095 1184 aa10.34□□□□□ -0.75
HCG25-219ENST00000442228 EHMT2Q96KQ7 1210 aa10.32□□□□□ -0.76
HCG25-219ENST00000442228 TOPBP1Q92547 1522 aa10.3□□□□□ -0.76
HCG25-219ENST00000442228 ARAP1Q96P48 1450 aa10.3□□□□□ -0.76
HCG25-219ENST00000442228 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.29□□□□□ -0.76
HCG25-219ENST00000442228 RSF1Q96T23 1441 aaPredicted RBP10.28□□□□□ -0.76
HCG25-219ENST00000442228 ABCC8Q09428 1581 aa10.27□□□□□ -0.76
HCG25-219ENST00000442228 SLC4A2P04920 1241 aa10.27□□□□□ -0.77
HCG25-219ENST00000442228 CSRNP3Q8WYN3 585 aa10.27□□□□□ -0.77
HCG25-219ENST00000442228 FOXD4L1Q9NU39 408 aa10.27□□□□□ -0.77
HCG25-219ENST00000442228 AQRO60306 1485 aaKnown RBP eCLIP10.26□□□□□ -0.77
HCG25-219ENST00000442228 ZBTB22O15209 634 aa10.25□□□□□ -0.77
HCG25-219ENST00000442228 DNMBPQ6XZF7 1577 aa10.24□□□□□ -0.77
HCG25-219ENST00000442228 TARBP1Q13395 1621 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms