RNA–Protein interactions for RNA: ENST00000442161.1

AC004893.1-201, humanhuman

BASIC

Gene AC004893.1, Length 1,393 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004893.1-201ENST00000442161 NISCHQ9Y2I1 1504 aa22.29■■□□□ 1.16
AC004893.1-201ENST00000442161 AEBP2Q6ZN18 517 aaPredicted RBP21.75■■□□□ 1.07
AC004893.1-201ENST00000442161 CHIC1Q5VXU3 224 aa20.46■□□□□ 0.87
AC004893.1-201ENST00000442161 CCDC180Q9P1Z9 1646 aa19.25■□□□□ 0.67
AC004893.1-201ENST00000442161 ZCCHC6Q5VYS8 1495 aaKnown RBP18.89■□□□□ 0.61
AC004893.1-201ENST00000442161 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
AC004893.1-201ENST00000442161 DCAF1Q9Y4B6 1507 aa18.61■□□□□ 0.57
AC004893.1-201ENST00000442161 PHF23Q9BUL5 403 aaPredicted RBP18.42■□□□□ 0.54
AC004893.1-201ENST00000442161 SHROOM4Q9ULL8 1493 aa18.32■□□□□ 0.52
AC004893.1-201ENST00000442161 MYO15BQ96JP2 1530 aa18.17■□□□□ 0.5
AC004893.1-201ENST00000442161 SUPT5HO00267 1087 aaKnown RBP18.01■□□□□ 0.47
AC004893.1-201ENST00000442161 ABCC9O60706 1549 aa17.82■□□□□ 0.44
AC004893.1-201ENST00000442161 DCAF8L2P0C7V8 631 aa17.81■□□□□ 0.44
AC004893.1-201ENST00000442161 NACADO15069 1562 aa17.72■□□□□ 0.43
AC004893.1-201ENST00000442161 SCRIBQ14160 1630 aa17.53■□□□□ 0.4
AC004893.1-201ENST00000442161 RSF1Q96T23 1441 aaPredicted RBP17.51■□□□□ 0.39
AC004893.1-201ENST00000442161 RB1CC1Q8TDY2 1594 aa17.48■□□□□ 0.39
AC004893.1-201ENST00000442161 FOXD1Q16676 465 aa17.46■□□□□ 0.39
AC004893.1-201ENST00000442161 HRCP23327 699 aa17.2■□□□□ 0.34
AC004893.1-201ENST00000442161 BAZ1AQ9NRL2 1556 aaPredicted RBP17.2■□□□□ 0.34
AC004893.1-201ENST00000442161 MROH2BQ7Z745 1585 aa17.15■□□□□ 0.34
AC004893.1-201ENST00000442161 CECR2Q9BXF3 1484 aa17.12■□□□□ 0.33
AC004893.1-201ENST00000442161 WIZO95785 1651 aa17.05■□□□□ 0.32
AC004893.1-201ENST00000442161 EIF4G1Q04637 1599 aaKnown RBP17.03■□□□□ 0.32
AC004893.1-201ENST00000442161 TRIM41Q8WV44 630 aa17.02■□□□□ 0.32
AC004893.1-201ENST00000442161 TOP2AP11388 1531 aaKnown RBP17■□□□□ 0.31
AC004893.1-201ENST00000442161 SMARCA4P51532 1647 aa16.98■□□□□ 0.31
AC004893.1-201ENST00000442161 UNC13AQ9UPW8 1703 aa16.98■□□□□ 0.31
AC004893.1-201ENST00000442161 TRIM26Q12899 539 aaPredicted RBP16.97■□□□□ 0.31
AC004893.1-201ENST00000442161 LOC105371045A0A1W2PR82 267 aa16.95■□□□□ 0.3
AC004893.1-201ENST00000442161 PCGF6Q9BYE7 350 aa16.95■□□□□ 0.3
AC004893.1-201ENST00000442161 PEG3Q9GZU2 1588 aa16.87■□□□□ 0.29
AC004893.1-201ENST00000442161 POTEDQ86YR6 584 aa16.85■□□□□ 0.29
AC004893.1-201ENST00000442161 SMARCA2P51531 1590 aa16.82■□□□□ 0.28
AC004893.1-201ENST00000442161 ZEB1P37275 1124 aaPredicted RBP16.8■□□□□ 0.28
AC004893.1-201ENST00000442161 EEA1Q15075 1411 aa16.77■□□□□ 0.27
AC004893.1-201ENST00000442161 BICRAQ9NZM4 1560 aa16.75■□□□□ 0.27
AC004893.1-201ENST00000442161 CCDC88BA6NC98 1476 aa16.75■□□□□ 0.27
AC004893.1-201ENST00000442161 WRNQ14191 1432 aaPredicted RBP eCLIP16.63■□□□□ 0.25
AC004893.1-201ENST00000442161 MSH5O43196 834 aa16.57■□□□□ 0.24
AC004893.1-201ENST00000442161 TNIKQ9UKE5 1360 aa16.53■□□□□ 0.24
AC004893.1-201ENST00000442161 ABCC8Q09428 1581 aa16.53■□□□□ 0.24
AC004893.1-201ENST00000442161 FAM9AQ8IZU1 332 aaPredicted RBP16.52■□□□□ 0.24
AC004893.1-201ENST00000442161 ATAD2BQ9ULI0 1458 aa16.5■□□□□ 0.23
AC004893.1-201ENST00000442161 KIF21BO75037 1637 aa16.46■□□□□ 0.23
AC004893.1-201ENST00000442161 GOLGA3Q08378 1498 aa16.43■□□□□ 0.22
AC004893.1-201ENST00000442161 BAZ1BQ9UIG0 1483 aaKnown RBP16.43■□□□□ 0.22
AC004893.1-201ENST00000442161 CEP162Q5TB80 1403 aa16.41■□□□□ 0.22
AC004893.1-201ENST00000442161 PPARGC1BQ86YN6 1023 aaKnown RBP16.4■□□□□ 0.22
AC004893.1-201ENST00000442161 CSRNP3Q8WYN3 585 aa16.4■□□□□ 0.22
AC004893.1-201ENST00000442161 HMGXB3Q12766 1538 aa16.39■□□□□ 0.21
AC004893.1-201ENST00000442161 CEP164Q9UPV0 1460 aa16.38■□□□□ 0.21
AC004893.1-201ENST00000442161 SOGA1O94964 1423 aa16.38■□□□□ 0.21
AC004893.1-201ENST00000442161 SYNJ1O43426 1573 aa16.34■□□□□ 0.21
AC004893.1-201ENST00000442161 NCAPD3P42695 1498 aa16.32■□□□□ 0.2
AC004893.1-201ENST00000442161 TOP2BQ02880 1626 aa16.32■□□□□ 0.2
AC004893.1-201ENST00000442161 BIVM-ERCC5R4GMW8 1640 aa16.32■□□□□ 0.2
AC004893.1-201ENST00000442161 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
AC004893.1-201ENST00000442161 PIAS4Q8N2W9 510 aaPredicted RBP16.27■□□□□ 0.2
AC004893.1-201ENST00000442161 ERICH3Q5RHP9 1530 aa16.23■□□□□ 0.19
AC004893.1-201ENST00000442161 RUSC2Q8N2Y8 1516 aa16.23■□□□□ 0.19
AC004893.1-201ENST00000442161 PRDM2Q13029 1718 aa16.18■□□□□ 0.18
AC004893.1-201ENST00000442161 VPS8Q8N3P4 1428 aa16.15■□□□□ 0.18
AC004893.1-201ENST00000442161 UBTFP17480 764 aaKnown RBP16.14■□□□□ 0.17
AC004893.1-201ENST00000442161 CLIP1P30622 1438 aa16.14■□□□□ 0.17
AC004893.1-201ENST00000442161 CFTRP13569 1480 aa16.12■□□□□ 0.17
AC004893.1-201ENST00000442161 PRXQ9BXM0 1461 aa16.1■□□□□ 0.17
AC004893.1-201ENST00000442161 EHMT2Q96KQ7 1210 aa16.1■□□□□ 0.17
AC004893.1-201ENST00000442161 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
AC004893.1-201ENST00000442161 CCER1Q8TC90 406 aaPredicted RBP16.07■□□□□ 0.16
AC004893.1-201ENST00000442161 RAPGEF2Q9Y4G8 1499 aa16.05■□□□□ 0.16
AC004893.1-201ENST00000442161 KIF27Q86VH2 1401 aa16.02■□□□□ 0.16
AC004893.1-201ENST00000442161 CUX1P39880 1505 aa16.02■□□□□ 0.15
AC004893.1-201ENST00000442161 PPP6R1Q9UPN7 881 aa15.97■□□□□ 0.15
AC004893.1-201ENST00000442161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.96■□□□□ 0.15
AC004893.1-201ENST00000442161 CLSPNQ9HAW4 1339 aa15.95■□□□□ 0.14
AC004893.1-201ENST00000442161 ADRA2BP18089 450 aa15.94■□□□□ 0.14
AC004893.1-201ENST00000442161 APLP2Q06481 763 aa15.92■□□□□ 0.14
AC004893.1-201ENST00000442161 MAP3K1Q13233 1512 aa15.92■□□□□ 0.14
AC004893.1-201ENST00000442161 ARAP1Q96P48 1450 aa15.89■□□□□ 0.14
AC004893.1-201ENST00000442161 CADPSQ9ULU8 1353 aa15.88■□□□□ 0.13
AC004893.1-201ENST00000442161 CUX2O14529 1486 aa15.83■□□□□ 0.12
AC004893.1-201ENST00000442161 RRBP1Q9P2E9 1410 aaKnown RBP15.82■□□□□ 0.12
AC004893.1-201ENST00000442161 DIEXFQ68CQ4 756 aaKnown RBP15.78■□□□□ 0.12
AC004893.1-201ENST00000442161 ZNF316A6NFI3 1004 aaPredicted RBP15.77■□□□□ 0.12
AC004893.1-201ENST00000442161 PELP1Q8IZL8 1130 aaKnown RBP15.77■□□□□ 0.12
AC004893.1-201ENST00000442161 ARHGAP35Q9NRY4 1499 aa15.77■□□□□ 0.11
AC004893.1-201ENST00000442161 IGF1RP08069 1367 aa15.75■□□□□ 0.11
AC004893.1-201ENST00000442161 DNMBPQ6XZF7 1577 aa15.74■□□□□ 0.11
AC004893.1-201ENST00000442161 CC2D2AQ9P2K1 1620 aa15.74■□□□□ 0.11
AC004893.1-201ENST00000442161 FGD5Q6ZNL6 1462 aa15.72■□□□□ 0.11
AC004893.1-201ENST00000442161 CUL7Q14999 1698 aa15.71■□□□□ 0.11
AC004893.1-201ENST00000442161 CENPBP07199 599 aaPredicted RBP15.71■□□□□ 0.11
AC004893.1-201ENST00000442161 EFCAB5A4FU69 1503 aa15.7■□□□□ 0.1
AC004893.1-201ENST00000442161 ABCA10Q8WWZ4 1543 aa15.7■□□□□ 0.1
AC004893.1-201ENST00000442161 FHAD1B1AJZ9 1412 aa15.7■□□□□ 0.1
AC004893.1-201ENST00000442161 CARMIL1Q5VZK9 1371 aa15.68■□□□□ 0.1
AC004893.1-201ENST00000442161 TIAM1Q13009 1591 aa15.68■□□□□ 0.1
AC004893.1-201ENST00000442161 ACIN1Q9UKV3 1341 aaKnown RBP15.68■□□□□ 0.1
AC004893.1-201ENST00000442161 FANCD2Q9BXW9 1451 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms