RNA–Protein interactions for RNA: ENST00000439406.5

HCG20-208, Transcript of HLA complex group 20, humanhuman

TSL 2 BASIC

Gene HCG20, Length 1,202 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-208ENST00000439406 CHIC1Q5VXU3 224 aa19.3■□□□□ 0.68
HCG20-208ENST00000439406 AEBP2Q6ZN18 517 aaPredicted RBP18.79■□□□□ 0.6
HCG20-208ENST00000439406 NISCHQ9Y2I1 1504 aa17.88■□□□□ 0.45
HCG20-208ENST00000439406 PHF23Q9BUL5 403 aaPredicted RBP17.09■□□□□ 0.33
HCG20-208ENST00000439406 ABCC9O60706 1549 aa16.59■□□□□ 0.25
HCG20-208ENST00000439406 EHMT2Q96KQ7 1210 aa16.34■□□□□ 0.21
HCG20-208ENST00000439406 PLPPR3Q6T4P5 718 aa16.3■□□□□ 0.2
HCG20-208ENST00000439406 CCDC180Q9P1Z9 1646 aa16.18■□□□□ 0.18
HCG20-208ENST00000439406 DNAJC5BQ9UF47 199 aa16.01■□□□□ 0.15
HCG20-208ENST00000439406 SENP3Q9H4L4 574 aaPredicted RBP15.95■□□□□ 0.14
HCG20-208ENST00000439406 SLC24A1O60721 1099 aa15.89■□□□□ 0.13
HCG20-208ENST00000439406 KCNA4P22459 653 aa15.7■□□□□ 0.1
HCG20-208ENST00000439406 RB1CC1Q8TDY2 1594 aa15.65■□□□□ 0.1
HCG20-208ENST00000439406 CSRNP3Q8WYN3 585 aa15.48■□□□□ 0.07
HCG20-208ENST00000439406 NACADO15069 1562 aa15.46■□□□□ 0.07
HCG20-208ENST00000439406 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
HCG20-208ENST00000439406 DCAF8L2P0C7V8 631 aa15.33■□□□□ 0.04
HCG20-208ENST00000439406 SLC4A1APQ9BWU0 796 aaKnown RBP15.22■□□□□ 0.03
HCG20-208ENST00000439406 UNC13AQ9UPW8 1703 aa15.19■□□□□ 0.02
HCG20-208ENST00000439406 ADRA2BP18089 450 aa15.18■□□□□ 0.02
HCG20-208ENST00000439406 MYO15BQ96JP2 1530 aa15.16■□□□□ 0.02
HCG20-208ENST00000439406 BICRAQ9NZM4 1560 aa15.15■□□□□ 0.02
HCG20-208ENST00000439406 DNAJC5Q9H3Z4 198 aa15.1■□□□□ 0.01
HCG20-208ENST00000439406 AMER1Q5JTC6 1135 aaPredicted RBP15.09■□□□□ 0.01
HCG20-208ENST00000439406 RTN4Q9NQC3 1192 aaKnown RBP15.06■□□□□ 0
HCG20-208ENST00000439406 CECR2Q9BXF3 1484 aa15.02■□□□□ -0
HCG20-208ENST00000439406 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
HCG20-208ENST00000439406 CC2D2AQ9P2K1 1620 aa14.96□□□□□ -0.01
HCG20-208ENST00000439406 FOXD1Q16676 465 aa14.9□□□□□ -0.02
HCG20-208ENST00000439406 EIF4G1Q04637 1599 aaKnown RBP14.84□□□□□ -0.03
HCG20-208ENST00000439406 DCAF1Q9Y4B6 1507 aa14.78□□□□□ -0.04
HCG20-208ENST00000439406 ZCCHC6Q5VYS8 1495 aaKnown RBP14.68□□□□□ -0.06
HCG20-208ENST00000439406 PPP6R1Q9UPN7 881 aa14.65□□□□□ -0.06
HCG20-208ENST00000439406 SCRIBQ14160 1630 aa14.65□□□□□ -0.06
HCG20-208ENST00000439406 NCBP3Q53F19 620 aaKnown RBP14.58□□□□□ -0.08
HCG20-208ENST00000439406 CUX2O14529 1486 aa14.54□□□□□ -0.08
HCG20-208ENST00000439406 PPP4R3CPQ6ZMV5 832 aa14.53□□□□□ -0.08
HCG20-208ENST00000439406 ZBTB22O15209 634 aa14.43□□□□□ -0.1
HCG20-208ENST00000439406 ERCC6Q03468 1493 aa14.38□□□□□ -0.11
HCG20-208ENST00000439406 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
HCG20-208ENST00000439406 NPM3O75607 178 aaKnown RBP14.31□□□□□ -0.12
HCG20-208ENST00000439406 TRIM41Q8WV44 630 aa14.16□□□□□ -0.14
HCG20-208ENST00000439406 ATAD2BQ9ULI0 1458 aa14.16□□□□□ -0.14
HCG20-208ENST00000439406 NESP48681 1621 aa14.11□□□□□ -0.15
HCG20-208ENST00000439406 SMARCA2P51531 1590 aa14.1□□□□□ -0.15
HCG20-208ENST00000439406 HMGXB3Q12766 1538 aa14.1□□□□□ -0.15
HCG20-208ENST00000439406 FOXD4L1Q9NU39 408 aa14.08□□□□□ -0.16
HCG20-208ENST00000439406 THOC2Q8NI27 1593 aaKnown RBP14.02□□□□□ -0.16
HCG20-208ENST00000439406 LAMC3Q9Y6N6 1575 aa14.01□□□□□ -0.17
HCG20-208ENST00000439406 PDS5BQ9NTI5 1447 aa14□□□□□ -0.17
HCG20-208ENST00000439406 SMARCA4P51532 1647 aa13.98□□□□□ -0.17
HCG20-208ENST00000439406 BAZ1BQ9UIG0 1483 aaKnown RBP13.98□□□□□ -0.17
HCG20-208ENST00000439406 FKBP8Q14318 412 aa13.95□□□□□ -0.18
HCG20-208ENST00000439406 PIAS4Q8N2W9 510 aaPredicted RBP13.92□□□□□ -0.18
HCG20-208ENST00000439406 OSCARQ8IYS5 282 aa13.9□□□□□ -0.18
HCG20-208ENST00000439406 PEG3Q9GZU2 1588 aa13.9□□□□□ -0.18
HCG20-208ENST00000439406 BAZ1AQ9NRL2 1556 aaPredicted RBP13.9□□□□□ -0.18
HCG20-208ENST00000439406 MSH5O43196 834 aa13.88□□□□□ -0.19
HCG20-208ENST00000439406 KIF21AQ7Z4S6 1674 aa13.88□□□□□ -0.19
HCG20-208ENST00000439406 CADPSQ9ULU8 1353 aa13.86□□□□□ -0.19
HCG20-208ENST00000439406 PRKCSHP14314 528 aaPredicted RBP13.85□□□□□ -0.19
HCG20-208ENST00000439406 BCANQ96GW7 911 aa13.84□□□□□ -0.19
HCG20-208ENST00000439406 MRC2Q9UBG0 1479 aa13.83□□□□□ -0.2
HCG20-208ENST00000439406 CNKSR2Q8WXI2 1034 aa13.83□□□□□ -0.2
HCG20-208ENST00000439406 PLCB2Q00722 1185 aa13.82□□□□□ -0.2
HCG20-208ENST00000439406 WDR62O43379 1518 aa13.8□□□□□ -0.2
HCG20-208ENST00000439406 TAOK2Q9UL54 1235 aa13.74□□□□□ -0.21
HCG20-208ENST00000439406 MROH2BQ7Z745 1585 aa13.72□□□□□ -0.21
HCG20-208ENST00000439406 CEP164Q9UPV0 1460 aa13.68□□□□□ -0.22
HCG20-208ENST00000439406 HAP1P54257 671 aaPredicted RBP13.67□□□□□ -0.22
HCG20-208ENST00000439406 DAXXQ9UER7 740 aaPredicted RBP13.66□□□□□ -0.22
HCG20-208ENST00000439406 FANCD2Q9BXW9 1451 aa13.64□□□□□ -0.23
HCG20-208ENST00000439406 RIMBP3CA6NJZ7 1639 aa13.59□□□□□ -0.23
HCG20-208ENST00000439406 RIMBP3BA6NNM3 1639 aa13.59□□□□□ -0.23
HCG20-208ENST00000439406 RIMBP3Q9UFD9 1639 aa13.59□□□□□ -0.23
HCG20-208ENST00000439406 CFTRP13569 1480 aa13.59□□□□□ -0.23
HCG20-208ENST00000439406 CYB5RLQ6IPT4 315 aa13.55□□□□□ -0.24
HCG20-208ENST00000439406 TRHP20396 242 aaPredicted RBP13.54□□□□□ -0.24
HCG20-208ENST00000439406 SCAF1Q9H7N4 1312 aaKnown RBP13.53□□□□□ -0.24
HCG20-208ENST00000439406 ARHGEF11O15085 1522 aa13.53□□□□□ -0.24
HCG20-208ENST00000439406 URB2Q14146 1524 aaKnown RBP13.52□□□□□ -0.25
HCG20-208ENST00000439406 WIZO95785 1651 aa13.51□□□□□ -0.25
HCG20-208ENST00000439406 TPRNQ4KMQ1 711 aa13.51□□□□□ -0.25
HCG20-208ENST00000439406 POTEDQ86YR6 584 aa13.51□□□□□ -0.25
HCG20-208ENST00000439406 VSIG10Q8N0Z9 540 aa13.48□□□□□ -0.25
HCG20-208ENST00000439406 IFT140Q96RY7 1462 aa13.47□□□□□ -0.25
HCG20-208ENST00000439406 ATXN8OSP0DMR3 200 aa13.46□□□□□ -0.25
HCG20-208ENST00000439406 ZNF608Q9ULD9 1512 aaPredicted RBP13.42□□□□□ -0.26
HCG20-208ENST00000439406 ARXQ96QS3 562 aa13.41□□□□□ -0.26
HCG20-208ENST00000439406 ABCC8Q09428 1581 aa13.37□□□□□ -0.27
HCG20-208ENST00000439406 RSF1Q96T23 1441 aaPredicted RBP13.37□□□□□ -0.27
HCG20-208ENST00000439406 ARAP1Q96P48 1450 aa13.36□□□□□ -0.27
HCG20-208ENST00000439406 TOP2AP11388 1531 aaKnown RBP13.34□□□□□ -0.27
HCG20-208ENST00000439406 FBLN2P98095 1184 aa13.33□□□□□ -0.28
HCG20-208ENST00000439406 TOPBP1Q92547 1522 aa13.33□□□□□ -0.28
HCG20-208ENST00000439406 TIMELESSQ9UNS1 1208 aa13.32□□□□□ -0.28
HCG20-208ENST00000439406 PRDM2Q13029 1718 aa13.3□□□□□ -0.28
HCG20-208ENST00000439406 AQRO60306 1485 aaKnown RBP eCLIP13.29□□□□□ -0.28
HCG20-208ENST00000439406 EIF4G3O43432 1585 aaKnown RBP13.28□□□□□ -0.28
HCG20-208ENST00000439406 CHD1O14646 1710 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 494.4 ms