RNA–Protein interactions for RNA: ENST00000432700.5

APOL3-209, Transcript of apolipoprotein L3, humanhuman

TSL 1 (best)

Gene APOL3, Length 2,443 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOL3-209ENST00000432700 NISCHQ9Y2I1 1504 aa23.48■■□□□ 1.35
APOL3-209ENST00000432700 SHROOM4Q9ULL8 1493 aa20.64■□□□□ 0.9
APOL3-209ENST00000432700 SUPT5HO00267 1087 aaKnown RBP20.39■□□□□ 0.86
APOL3-209ENST00000432700 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
APOL3-209ENST00000432700 HRCP23327 699 aa20.07■□□□□ 0.8
APOL3-209ENST00000432700 CHIC1Q5VXU3 224 aa19.96■□□□□ 0.79
APOL3-209ENST00000432700 ZCCHC6Q5VYS8 1495 aaKnown RBP19.94■□□□□ 0.78
APOL3-209ENST00000432700 PCGF6Q9BYE7 350 aa19.86■□□□□ 0.77
APOL3-209ENST00000432700 PPARGC1BQ86YN6 1023 aaKnown RBP19.82■□□□□ 0.76
APOL3-209ENST00000432700 DCAF8L2P0C7V8 631 aa19.6■□□□□ 0.73
APOL3-209ENST00000432700 CCDC180Q9P1Z9 1646 aa19.57■□□□□ 0.72
APOL3-209ENST00000432700 LOC105371045A0A1W2PR82 267 aa19.53■□□□□ 0.72
APOL3-209ENST00000432700 DCAF1Q9Y4B6 1507 aa19.43■□□□□ 0.7
APOL3-209ENST00000432700 TRIM26Q12899 539 aaPredicted RBP19.22■□□□□ 0.67
APOL3-209ENST00000432700 ABCC9O60706 1549 aa18.89■□□□□ 0.62
APOL3-209ENST00000432700 FAM9AQ8IZU1 332 aaPredicted RBP18.89■□□□□ 0.61
APOL3-209ENST00000432700 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
APOL3-209ENST00000432700 ZEB1P37275 1124 aaPredicted RBP18.85■□□□□ 0.61
APOL3-209ENST00000432700 EHMT2Q96KQ7 1210 aa18.85■□□□□ 0.61
APOL3-209ENST00000432700 TRIM41Q8WV44 630 aa18.83■□□□□ 0.61
APOL3-209ENST00000432700 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.61
APOL3-209ENST00000432700 RB1CC1Q8TDY2 1594 aa18.74■□□□□ 0.59
APOL3-209ENST00000432700 SCRIBQ14160 1630 aa18.7■□□□□ 0.58
APOL3-209ENST00000432700 PELP1Q8IZL8 1130 aaKnown RBP18.67■□□□□ 0.58
APOL3-209ENST00000432700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.54■□□□□ 0.56
APOL3-209ENST00000432700 NEUROD1Q13562 356 aa18.48■□□□□ 0.55
APOL3-209ENST00000432700 CECR2Q9BXF3 1484 aa18.46■□□□□ 0.55
APOL3-209ENST00000432700 ACIN1Q9UKV3 1341 aaKnown RBP18.44■□□□□ 0.54
APOL3-209ENST00000432700 CCER1Q8TC90 406 aaPredicted RBP18.4■□□□□ 0.54
APOL3-209ENST00000432700 MROH2BQ7Z745 1585 aa18.38■□□□□ 0.53
APOL3-209ENST00000432700 TTBK1Q5TCY1 1321 aaPredicted RBP18.32■□□□□ 0.52
APOL3-209ENST00000432700 WIZO95785 1651 aa18.3■□□□□ 0.52
APOL3-209ENST00000432700 GTF3C3Q9Y5Q9 886 aa18.3■□□□□ 0.52
APOL3-209ENST00000432700 DIEXFQ68CQ4 756 aaKnown RBP18.29■□□□□ 0.52
APOL3-209ENST00000432700 EIF4G1Q04637 1599 aaKnown RBP18.19■□□□□ 0.5
APOL3-209ENST00000432700 CENPBP07199 599 aaPredicted RBP18.13■□□□□ 0.49
APOL3-209ENST00000432700 CCDC88BA6NC98 1476 aa18.12■□□□□ 0.49
APOL3-209ENST00000432700 ABCC8Q09428 1581 aa18.11■□□□□ 0.49
APOL3-209ENST00000432700 BAZ1AQ9NRL2 1556 aaPredicted RBP18.09■□□□□ 0.49
APOL3-209ENST00000432700 WRNQ14191 1432 aaPredicted RBP eCLIP18.08■□□□□ 0.49
APOL3-209ENST00000432700 CEP162Q5TB80 1403 aa18.08■□□□□ 0.48
APOL3-209ENST00000432700 SOGA1O94964 1423 aa18.04■□□□□ 0.48
APOL3-209ENST00000432700 NACADO15069 1562 aa18.04■□□□□ 0.48
APOL3-209ENST00000432700 YTHDC1Q96MU7 727 aaKnown RBP18.02■□□□□ 0.48
APOL3-209ENST00000432700 ZNF316A6NFI3 1004 aaPredicted RBP18■□□□□ 0.47
APOL3-209ENST00000432700 RUSC2Q8N2Y8 1516 aa17.97■□□□□ 0.47
APOL3-209ENST00000432700 TNIKQ9UKE5 1360 aa17.94■□□□□ 0.46
APOL3-209ENST00000432700 MIER1Q8N108 512 aa17.92■□□□□ 0.46
APOL3-209ENST00000432700 UBTFP17480 764 aaKnown RBP17.9■□□□□ 0.46
APOL3-209ENST00000432700 TOP2AP11388 1531 aaKnown RBP17.89■□□□□ 0.45
APOL3-209ENST00000432700 CSRNP3Q8WYN3 585 aa17.88■□□□□ 0.45
APOL3-209ENST00000432700 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
APOL3-209ENST00000432700 HNRNPUL2Q1KMD3 747 aaKnown RBP17.85■□□□□ 0.45
APOL3-209ENST00000432700 SMARCA4P51532 1647 aa17.78■□□□□ 0.44
APOL3-209ENST00000432700 MYT1Q01538 1121 aa17.75■□□□□ 0.43
APOL3-209ENST00000432700 GOLGA3Q08378 1498 aa17.75■□□□□ 0.43
APOL3-209ENST00000432700 EEA1Q15075 1411 aa17.73■□□□□ 0.43
APOL3-209ENST00000432700 CLIP1P30622 1438 aa17.63■□□□□ 0.41
APOL3-209ENST00000432700 RANGAP1P46060 587 aaPredicted RBP17.62■□□□□ 0.41
APOL3-209ENST00000432700 SYNJ1O43426 1573 aa17.59■□□□□ 0.41
APOL3-209ENST00000432700 CEP164Q9UPV0 1460 aa17.58■□□□□ 0.41
APOL3-209ENST00000432700 VPS8Q8N3P4 1428 aa17.58■□□□□ 0.4
APOL3-209ENST00000432700 RAPGEF2Q9Y4G8 1499 aa17.54■□□□□ 0.4
APOL3-209ENST00000432700 KIF21BO75037 1637 aa17.54■□□□□ 0.4
APOL3-209ENST00000432700 UNC13AQ9UPW8 1703 aa17.54■□□□□ 0.4
APOL3-209ENST00000432700 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
APOL3-209ENST00000432700 SUPT16HQ9Y5B9 1047 aaKnown RBP17.5■□□□□ 0.39
APOL3-209ENST00000432700 DHX57Q6P158 1386 aaKnown RBP17.48■□□□□ 0.39
APOL3-209ENST00000432700 APLP2Q06481 763 aa17.48■□□□□ 0.39
APOL3-209ENST00000432700 BAZ1BQ9UIG0 1483 aaKnown RBP17.41■□□□□ 0.38
APOL3-209ENST00000432700 KANK4Q5T7N3 995 aaPredicted RBP17.41■□□□□ 0.38
APOL3-209ENST00000432700 KCNH8Q96L42 1107 aa17.37■□□□□ 0.37
APOL3-209ENST00000432700 TSHZ2Q9NRE2 1034 aa17.35■□□□□ 0.37
APOL3-209ENST00000432700 BICRAQ9NZM4 1560 aa17.34■□□□□ 0.37
APOL3-209ENST00000432700 CLSPNQ9HAW4 1339 aa17.33■□□□□ 0.37
APOL3-209ENST00000432700 PEG3Q9GZU2 1588 aa17.33■□□□□ 0.37
APOL3-209ENST00000432700 ARAP1Q96P48 1450 aa17.33■□□□□ 0.36
APOL3-209ENST00000432700 ATAD2BQ9ULI0 1458 aa17.26■□□□□ 0.35
APOL3-209ENST00000432700 ITGAEP38570 1179 aa17.24■□□□□ 0.35
APOL3-209ENST00000432700 TOP2BQ02880 1626 aa17.22■□□□□ 0.35
APOL3-209ENST00000432700 RRBP1Q9P2E9 1410 aaKnown RBP17.22■□□□□ 0.35
APOL3-209ENST00000432700 PRXQ9BXM0 1461 aa17.22■□□□□ 0.35
APOL3-209ENST00000432700 BCANQ96GW7 911 aa17.21■□□□□ 0.35
APOL3-209ENST00000432700 CUX2O14529 1486 aa17.17■□□□□ 0.34
APOL3-209ENST00000432700 ERICH3Q5RHP9 1530 aa17.16■□□□□ 0.34
APOL3-209ENST00000432700 CCNB3Q8WWL7 1395 aa17.16■□□□□ 0.34
APOL3-209ENST00000432700 ANP32EQ9BTT0 268 aa17.15■□□□□ 0.34
APOL3-209ENST00000432700 MAPKBP1O60336 1514 aa17.13■□□□□ 0.33
APOL3-209ENST00000432700 RAB3GAP2Q9H2M9 1393 aa17.12■□□□□ 0.33
APOL3-209ENST00000432700 BIVM-ERCC5R4GMW8 1640 aa17.12■□□□□ 0.33
APOL3-209ENST00000432700 ARHGAP35Q9NRY4 1499 aa17.1■□□□□ 0.33
APOL3-209ENST00000432700 FKBP8Q14318 412 aa17.09■□□□□ 0.33
APOL3-209ENST00000432700 DDX10Q13206 875 aaKnown RBP17.08■□□□□ 0.33
APOL3-209ENST00000432700 SIN3AQ96ST3 1273 aa17.07■□□□□ 0.32
APOL3-209ENST00000432700 CUX1P39880 1505 aa17.05■□□□□ 0.32
APOL3-209ENST00000432700 HIRIP3Q9BW71 556 aaPredicted RBP17.05■□□□□ 0.32
APOL3-209ENST00000432700 WDR97A6NE52 1622 aa17.04■□□□□ 0.32
APOL3-209ENST00000432700 KIF27Q86VH2 1401 aa17■□□□□ 0.31
APOL3-209ENST00000432700 PPP1R15AO75807 674 aaPredicted RBP16.99■□□□□ 0.31
APOL3-209ENST00000432700 TRIM52Q96A61 297 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms