RNA–Protein interactions for RNA: ENST00000432436.1

STRC-202, Transcript of stereocilin, humanhuman

APPRIS ALT2 TSL 2

Gene STRC, Length 2,259 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-202ENST00000432436 NISCHQ9Y2I1 1504 aa27.23■■□□□ 1.95
STRC-202ENST00000432436 ABCC9O60706 1549 aa25.38■■□□□ 1.65
STRC-202ENST00000432436 PELP1Q8IZL8 1130 aaKnown RBP25.32■■□□□ 1.64
STRC-202ENST00000432436 MYT1Q01538 1121 aa25.14■■□□□ 1.62
STRC-202ENST00000432436 CCDC180Q9P1Z9 1646 aa24.76■■□□□ 1.55
STRC-202ENST00000432436 DNAJC5BQ9UF47 199 aa24.43■■□□□ 1.5
STRC-202ENST00000432436 TTBK1Q5TCY1 1321 aaPredicted RBP24.41■■□□□ 1.5
STRC-202ENST00000432436 RB1CC1Q8TDY2 1594 aa23.85■■□□□ 1.41
STRC-202ENST00000432436 HRCP23327 699 aa23.68■■□□□ 1.38
STRC-202ENST00000432436 SLC24A1O60721 1099 aa23.63■■□□□ 1.37
STRC-202ENST00000432436 PRKCSHP14314 528 aaPredicted RBP23.56■■□□□ 1.36
STRC-202ENST00000432436 NACADO15069 1562 aa23.5■■□□□ 1.35
STRC-202ENST00000432436 SHROOM4Q9ULL8 1493 aa23.45■■□□□ 1.34
STRC-202ENST00000432436 UNC13AQ9UPW8 1703 aa23.45■■□□□ 1.34
STRC-202ENST00000432436 PABPN1Q86U42 306 aaKnown RBP eCLIP23.44■■□□□ 1.34
STRC-202ENST00000432436 APLP2Q06481 763 aa23.29■■□□□ 1.32
STRC-202ENST00000432436 ERICH6Q7L0X2 663 aa23.29■■□□□ 1.32
STRC-202ENST00000432436 SUPT5HO00267 1087 aaKnown RBP23.27■■□□□ 1.32
STRC-202ENST00000432436 BICRAQ9NZM4 1560 aa23.25■■□□□ 1.31
STRC-202ENST00000432436 ZCCHC6Q5VYS8 1495 aaKnown RBP23.16■■□□□ 1.3
STRC-202ENST00000432436 DCAF8L2P0C7V8 631 aa23.05■■□□□ 1.28
STRC-202ENST00000432436 MYO15BQ96JP2 1530 aa23.03■■□□□ 1.28
STRC-202ENST00000432436 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
STRC-202ENST00000432436 CC2D2AQ9P2K1 1620 aa22.93■■□□□ 1.26
STRC-202ENST00000432436 CECR2Q9BXF3 1484 aa22.92■■□□□ 1.26
STRC-202ENST00000432436 DNAJC5Q9H3Z4 198 aa22.92■■□□□ 1.26
STRC-202ENST00000432436 SCAF1Q9H7N4 1312 aaKnown RBP22.8■■□□□ 1.24
STRC-202ENST00000432436 PCGF6Q9BYE7 350 aa22.76■■□□□ 1.23
STRC-202ENST00000432436 PPARGC1BQ86YN6 1023 aaKnown RBP22.71■■□□□ 1.23
STRC-202ENST00000432436 EIF4G1Q04637 1599 aaKnown RBP22.7■■□□□ 1.22
STRC-202ENST00000432436 DCAF1Q9Y4B6 1507 aa22.66■■□□□ 1.22
STRC-202ENST00000432436 BCL11AQ9H165 835 aa22.66■■□□□ 1.22
STRC-202ENST00000432436 DAXXQ9UER7 740 aaPredicted RBP22.57■■□□□ 1.2
STRC-202ENST00000432436 SCRIBQ14160 1630 aa22.48■■□□□ 1.19
STRC-202ENST00000432436 FAM9AQ8IZU1 332 aaPredicted RBP22.31■■□□□ 1.16
STRC-202ENST00000432436 TRIM26Q12899 539 aaPredicted RBP22.28■■□□□ 1.16
STRC-202ENST00000432436 LOC105371045A0A1W2PR82 267 aa22.26■■□□□ 1.15
STRC-202ENST00000432436 CUX2O14529 1486 aa22.17■■□□□ 1.14
STRC-202ENST00000432436 ZEB1P37275 1124 aaPredicted RBP22.09■■□□□ 1.13
STRC-202ENST00000432436 ACIN1Q9UKV3 1341 aaKnown RBP22.07■■□□□ 1.12
STRC-202ENST00000432436 ERCC6Q03468 1493 aa21.92■■□□□ 1.1
STRC-202ENST00000432436 CENPBP07199 599 aaPredicted RBP21.9■■□□□ 1.1
STRC-202ENST00000432436 EIF5BO60841 1220 aaKnown RBP21.81■■□□□ 1.08
STRC-202ENST00000432436 NEUROD1Q13562 356 aa21.79■■□□□ 1.08
STRC-202ENST00000432436 GTF3C3Q9Y5Q9 886 aa21.77■■□□□ 1.08
STRC-202ENST00000432436 RSF1Q96T23 1441 aaPredicted RBP21.74■■□□□ 1.07
STRC-202ENST00000432436 TRIM41Q8WV44 630 aa21.68■■□□□ 1.06
STRC-202ENST00000432436 NCAPD3P42695 1498 aa21.68■■□□□ 1.06
STRC-202ENST00000432436 NESP48681 1621 aa21.62■■□□□ 1.05
STRC-202ENST00000432436 THOC2Q8NI27 1593 aaKnown RBP21.61■■□□□ 1.05
STRC-202ENST00000432436 ATAD2BQ9ULI0 1458 aa21.53■■□□□ 1.04
STRC-202ENST00000432436 HMGXB3Q12766 1538 aa21.5■■□□□ 1.03
STRC-202ENST00000432436 SMARCA2P51531 1590 aa21.43■■□□□ 1.02
STRC-202ENST00000432436 ANP32EQ9BTT0 268 aa21.43■■□□□ 1.02
STRC-202ENST00000432436 KIF21AQ7Z4S6 1674 aa21.39■■□□□ 1.01
STRC-202ENST00000432436 SMARCA4P51532 1647 aa21.38■■□□□ 1.01
STRC-202ENST00000432436 LAMC3Q9Y6N6 1575 aa21.34■■□□□ 1.01
STRC-202ENST00000432436 BAZ1BQ9UIG0 1483 aaKnown RBP21.27■■□□□ 1
STRC-202ENST00000432436 UBE2Q2Q8WVN8 375 aa21.26■□□□□ 0.99
STRC-202ENST00000432436 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.2■□□□□ 0.98
STRC-202ENST00000432436 CCER1Q8TC90 406 aaPredicted RBP21.2■□□□□ 0.98
STRC-202ENST00000432436 EHMT2Q96KQ7 1210 aa21.17■□□□□ 0.98
STRC-202ENST00000432436 MROH2BQ7Z745 1585 aa21.17■□□□□ 0.98
STRC-202ENST00000432436 PEG3Q9GZU2 1588 aa21.17■□□□□ 0.98
STRC-202ENST00000432436 PDS5BQ9NTI5 1447 aa21.17■□□□□ 0.98
STRC-202ENST00000432436 BAZ1AQ9NRL2 1556 aaPredicted RBP21.16■□□□□ 0.98
STRC-202ENST00000432436 PLEKHG5O94827 1062 aa21.13■□□□□ 0.97
STRC-202ENST00000432436 DIEXFQ68CQ4 756 aaKnown RBP21.12■□□□□ 0.97
STRC-202ENST00000432436 WDR62O43379 1518 aa21.1■□□□□ 0.97
STRC-202ENST00000432436 WRNQ14191 1432 aaPredicted RBP eCLIP21.1■□□□□ 0.97
STRC-202ENST00000432436 MRC2Q9UBG0 1479 aa21.09■□□□□ 0.97
STRC-202ENST00000432436 WIZO95785 1651 aa21.09■□□□□ 0.97
STRC-202ENST00000432436 CSRNP3Q8WYN3 585 aa21.03■□□□□ 0.96
STRC-202ENST00000432436 CLSPNQ9HAW4 1339 aa20.99■□□□□ 0.95
STRC-202ENST00000432436 CADPSQ9ULU8 1353 aa20.95■□□□□ 0.94
STRC-202ENST00000432436 NCBP3Q53F19 620 aaKnown RBP20.95■□□□□ 0.94
STRC-202ENST00000432436 OSCARQ8IYS5 282 aa20.92■□□□□ 0.94
STRC-202ENST00000432436 RIMBP3CA6NJZ7 1639 aa20.9■□□□□ 0.94
STRC-202ENST00000432436 RIMBP3BA6NNM3 1639 aa20.9■□□□□ 0.94
STRC-202ENST00000432436 RIMBP3Q9UFD9 1639 aa20.9■□□□□ 0.94
STRC-202ENST00000432436 PODXL2Q9NZ53 605 aa20.9■□□□□ 0.94
STRC-202ENST00000432436 CEP162Q5TB80 1403 aa20.89■□□□□ 0.93
STRC-202ENST00000432436 ANO8Q9HCE9 1232 aaPredicted RBP20.87■□□□□ 0.93
STRC-202ENST00000432436 TNIKQ9UKE5 1360 aa20.85■□□□□ 0.93
STRC-202ENST00000432436 CEP164Q9UPV0 1460 aa20.85■□□□□ 0.93
STRC-202ENST00000432436 ZNF316A6NFI3 1004 aaPredicted RBP20.85■□□□□ 0.93
STRC-202ENST00000432436 CCDC88BA6NC98 1476 aa20.81■□□□□ 0.92
STRC-202ENST00000432436 TOP2AP11388 1531 aaKnown RBP20.79■□□□□ 0.92
STRC-202ENST00000432436 EEA1Q15075 1411 aa20.78■□□□□ 0.92
STRC-202ENST00000432436 ABCC8Q09428 1581 aa20.78■□□□□ 0.92
STRC-202ENST00000432436 TSHZ2Q9NRE2 1034 aa20.78■□□□□ 0.92
STRC-202ENST00000432436 FANCD2Q9BXW9 1451 aa20.76■□□□□ 0.91
STRC-202ENST00000432436 ARHGEF11O15085 1522 aa20.72■□□□□ 0.91
STRC-202ENST00000432436 PKNOX2Q96KN3 472 aa20.7■□□□□ 0.9
STRC-202ENST00000432436 SOGA1O94964 1423 aa20.69■□□□□ 0.9
STRC-202ENST00000432436 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
STRC-202ENST00000432436 ARXQ96QS3 562 aa20.64■□□□□ 0.89
STRC-202ENST00000432436 GOLGA3Q08378 1498 aa20.62■□□□□ 0.89
STRC-202ENST00000432436 CFTRP13569 1480 aa20.6■□□□□ 0.89
STRC-202ENST00000432436 MIER1Q8N108 512 aa20.58■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms