RNA–Protein interactions for RNA: ENST00000431873.6

ALK-202, Transcript of ALK receptor tyrosine kinase, humanhuman

TSL 5

Gene ALK, Length 2,520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALK-202ENST00000431873 NISCHQ9Y2I1 1504 aa19.97■□□□□ 0.79
ALK-202ENST00000431873 CCDC180Q9P1Z9 1646 aa17.06■□□□□ 0.32
ALK-202ENST00000431873 ZCCHC6Q5VYS8 1495 aaKnown RBP16.91■□□□□ 0.3
ALK-202ENST00000431873 SHROOM4Q9ULL8 1493 aa16.84■□□□□ 0.29
ALK-202ENST00000431873 SUPT5HO00267 1087 aaKnown RBP16.64■□□□□ 0.25
ALK-202ENST00000431873 DCAF1Q9Y4B6 1507 aa16.51■□□□□ 0.23
ALK-202ENST00000431873 DCAF8L2P0C7V8 631 aa16.34■□□□□ 0.21
ALK-202ENST00000431873 CHIC1Q5VXU3 224 aa16.34■□□□□ 0.21
ALK-202ENST00000431873 MYO15BQ96JP2 1530 aa16.28■□□□□ 0.2
ALK-202ENST00000431873 HRCP23327 699 aa16.2■□□□□ 0.18
ALK-202ENST00000431873 PCGF6Q9BYE7 350 aa16■□□□□ 0.15
ALK-202ENST00000431873 ABCC9O60706 1549 aa15.94■□□□□ 0.14
ALK-202ENST00000431873 SCRIBQ14160 1630 aa15.81■□□□□ 0.12
ALK-202ENST00000431873 LOC105371045A0A1W2PR82 267 aa15.81■□□□□ 0.12
ALK-202ENST00000431873 RSF1Q96T23 1441 aaPredicted RBP15.77■□□□□ 0.12
ALK-202ENST00000431873 NACADO15069 1562 aa15.77■□□□□ 0.12
ALK-202ENST00000431873 SLC24A1O60721 1099 aa15.74■□□□□ 0.11
ALK-202ENST00000431873 PPARGC1BQ86YN6 1023 aaKnown RBP15.73■□□□□ 0.11
ALK-202ENST00000431873 TRIM26Q12899 539 aaPredicted RBP15.71■□□□□ 0.11
ALK-202ENST00000431873 RB1CC1Q8TDY2 1594 aa15.64■□□□□ 0.09
ALK-202ENST00000431873 TRIM41Q8WV44 630 aa15.53■□□□□ 0.08
ALK-202ENST00000431873 ZEB1P37275 1124 aaPredicted RBP15.5■□□□□ 0.07
ALK-202ENST00000431873 CECR2Q9BXF3 1484 aa15.49■□□□□ 0.07
ALK-202ENST00000431873 MROH2BQ7Z745 1585 aa15.46■□□□□ 0.07
ALK-202ENST00000431873 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
ALK-202ENST00000431873 WIZO95785 1651 aa15.36■□□□□ 0.05
ALK-202ENST00000431873 FAM9AQ8IZU1 332 aaPredicted RBP15.34■□□□□ 0.05
ALK-202ENST00000431873 EIF4G1Q04637 1599 aaKnown RBP15.22■□□□□ 0.03
ALK-202ENST00000431873 TOP2AP11388 1531 aaKnown RBP15.21■□□□□ 0.03
ALK-202ENST00000431873 SMARCA4P51532 1647 aa15.2■□□□□ 0.02
ALK-202ENST00000431873 UNC13AQ9UPW8 1703 aa15.15■□□□□ 0.02
ALK-202ENST00000431873 EHMT2Q96KQ7 1210 aa15.14■□□□□ 0.01
ALK-202ENST00000431873 CCDC88BA6NC98 1476 aa15.1■□□□□ 0.01
ALK-202ENST00000431873 SMARCA2P51531 1590 aa15.09■□□□□ 0.01
ALK-202ENST00000431873 PELP1Q8IZL8 1130 aaKnown RBP15.06■□□□□ 0
ALK-202ENST00000431873 SCAF1Q9H7N4 1312 aaKnown RBP15.01□□□□□ -0.01
ALK-202ENST00000431873 WRNQ14191 1432 aaPredicted RBP eCLIP15.01□□□□□ -0.01
ALK-202ENST00000431873 BICRAQ9NZM4 1560 aa15□□□□□ -0.01
ALK-202ENST00000431873 PEG3Q9GZU2 1588 aa14.99□□□□□ -0.01
ALK-202ENST00000431873 CCER1Q8TC90 406 aaPredicted RBP14.98□□□□□ -0.01
ALK-202ENST00000431873 ABCC8Q09428 1581 aa14.97□□□□□ -0.01
ALK-202ENST00000431873 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.97□□□□□ -0.01
ALK-202ENST00000431873 EEA1Q15075 1411 aa14.96□□□□□ -0.01
ALK-202ENST00000431873 CEP162Q5TB80 1403 aa14.91□□□□□ -0.02
ALK-202ENST00000431873 TNIKQ9UKE5 1360 aa14.91□□□□□ -0.02
ALK-202ENST00000431873 PABPN1Q86U42 306 aaKnown RBP eCLIP14.88□□□□□ -0.03
ALK-202ENST00000431873 SOGA1O94964 1423 aa14.86□□□□□ -0.03
ALK-202ENST00000431873 ACIN1Q9UKV3 1341 aaKnown RBP14.84□□□□□ -0.03
ALK-202ENST00000431873 CSRNP3Q8WYN3 585 aa14.84□□□□□ -0.03
ALK-202ENST00000431873 ATAD2BQ9ULI0 1458 aa14.81□□□□□ -0.04
ALK-202ENST00000431873 DIEXFQ68CQ4 756 aaKnown RBP14.81□□□□□ -0.04
ALK-202ENST00000431873 GOLGA3Q08378 1498 aa14.77□□□□□ -0.04
ALK-202ENST00000431873 NEUROD1Q13562 356 aa14.76□□□□□ -0.05
ALK-202ENST00000431873 RUSC2Q8N2Y8 1516 aa14.76□□□□□ -0.05
ALK-202ENST00000431873 BAZ1BQ9UIG0 1483 aaKnown RBP14.76□□□□□ -0.05
ALK-202ENST00000431873 UBTFP17480 764 aaKnown RBP14.75□□□□□ -0.05
ALK-202ENST00000431873 CENPBP07199 599 aaPredicted RBP14.74□□□□□ -0.05
ALK-202ENST00000431873 TTBK1Q5TCY1 1321 aaPredicted RBP14.72□□□□□ -0.05
ALK-202ENST00000431873 SYNJ1O43426 1573 aa14.71□□□□□ -0.06
ALK-202ENST00000431873 CEP164Q9UPV0 1460 aa14.71□□□□□ -0.06
ALK-202ENST00000431873 KIF21BO75037 1637 aa14.7□□□□□ -0.06
ALK-202ENST00000431873 ZNF316A6NFI3 1004 aaPredicted RBP14.67□□□□□ -0.06
ALK-202ENST00000431873 GTF3C3Q9Y5Q9 886 aa14.64□□□□□ -0.07
ALK-202ENST00000431873 TOP2BQ02880 1626 aa14.6□□□□□ -0.07
ALK-202ENST00000431873 CLIP1P30622 1438 aa14.6□□□□□ -0.07
ALK-202ENST00000431873 MYT1Q01538 1121 aa14.59□□□□□ -0.07
ALK-202ENST00000431873 HMGXB3Q12766 1538 aa14.58□□□□□ -0.08
ALK-202ENST00000431873 VPS8Q8N3P4 1428 aa14.58□□□□□ -0.08
ALK-202ENST00000431873 NCAPD3P42695 1498 aa14.57□□□□□ -0.08
ALK-202ENST00000431873 BIVM-ERCC5R4GMW8 1640 aa14.56□□□□□ -0.08
ALK-202ENST00000431873 PLPPR3Q6T4P5 718 aa14.54□□□□□ -0.08
ALK-202ENST00000431873 RAPGEF2Q9Y4G8 1499 aa14.52□□□□□ -0.09
ALK-202ENST00000431873 HNRNPUL2Q1KMD3 747 aaKnown RBP14.52□□□□□ -0.09
ALK-202ENST00000431873 APLP2Q06481 763 aa14.49□□□□□ -0.09
ALK-202ENST00000431873 ERICH3Q5RHP9 1530 aa14.49□□□□□ -0.09
ALK-202ENST00000431873 PRXQ9BXM0 1461 aa14.46□□□□□ -0.09
ALK-202ENST00000431873 MIER1Q8N108 512 aa14.45□□□□□ -0.1
ALK-202ENST00000431873 CFTRP13569 1480 aa14.43□□□□□ -0.1
ALK-202ENST00000431873 CLSPNQ9HAW4 1339 aa14.43□□□□□ -0.1
ALK-202ENST00000431873 CUX1P39880 1505 aa14.41□□□□□ -0.1
ALK-202ENST00000431873 YTHDC1Q96MU7 727 aaKnown RBP14.4□□□□□ -0.1
ALK-202ENST00000431873 KIF27Q86VH2 1401 aa14.39□□□□□ -0.11
ALK-202ENST00000431873 ARAP1Q96P48 1450 aa14.33□□□□□ -0.12
ALK-202ENST00000431873 DHX57Q6P158 1386 aaKnown RBP14.33□□□□□ -0.12
ALK-202ENST00000431873 PRDM2Q13029 1718 aa14.32□□□□□ -0.12
ALK-202ENST00000431873 RANGAP1P46060 587 aaPredicted RBP14.31□□□□□ -0.12
ALK-202ENST00000431873 RTN4Q9NQC3 1192 aaKnown RBP14.3□□□□□ -0.12
ALK-202ENST00000431873 RRBP1Q9P2E9 1410 aaKnown RBP14.28□□□□□ -0.12
ALK-202ENST00000431873 CADPSQ9ULU8 1353 aa14.26□□□□□ -0.13
ALK-202ENST00000431873 CUX2O14529 1486 aa14.26□□□□□ -0.13
ALK-202ENST00000431873 KANK4Q5T7N3 995 aaPredicted RBP14.25□□□□□ -0.13
ALK-202ENST00000431873 ARHGAP35Q9NRY4 1499 aa14.21□□□□□ -0.13
ALK-202ENST00000431873 IGF1RP08069 1367 aa14.21□□□□□ -0.13
ALK-202ENST00000431873 CCNB3Q8WWL7 1395 aa14.19□□□□□ -0.14
ALK-202ENST00000431873 MAP3K1Q13233 1512 aa14.17□□□□□ -0.14
ALK-202ENST00000431873 FGD5Q6ZNL6 1462 aa14.15□□□□□ -0.14
ALK-202ENST00000431873 CARMIL1Q5VZK9 1371 aa14.15□□□□□ -0.15
ALK-202ENST00000431873 DAXXQ9UER7 740 aaPredicted RBP14.14□□□□□ -0.15
ALK-202ENST00000431873 CC2D2AQ9P2K1 1620 aa14.12□□□□□ -0.15
ALK-202ENST00000431873 FANCD2Q9BXW9 1451 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms