RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
SMC6-205ENST00000430591 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
SMC6-205ENST00000430591 SENP3Q9H4L4 574 aaPredicted RBP16.87■□□□□ 0.29
SMC6-205ENST00000430591 PHF23Q9BUL5 403 aaPredicted RBP16.82■□□□□ 0.28
SMC6-205ENST00000430591 NISCHQ9Y2I1 1504 aa16.26■□□□□ 0.19
SMC6-205ENST00000430591 FOXD1Q16676 465 aa15.75■□□□□ 0.11
SMC6-205ENST00000430591 PLPPR3Q6T4P5 718 aa15.32■□□□□ 0.04
SMC6-205ENST00000430591 PPP6R1Q9UPN7 881 aa14.95□□□□□ -0.02
SMC6-205ENST00000430591 ADRA2BP18089 450 aa14.89□□□□□ -0.03
SMC6-205ENST00000430591 PIAS4Q8N2W9 510 aaPredicted RBP14.75□□□□□ -0.05
SMC6-205ENST00000430591 MSH5O43196 834 aa14.57□□□□□ -0.08
SMC6-205ENST00000430591 CCDC180Q9P1Z9 1646 aa14.44□□□□□ -0.1
SMC6-205ENST00000430591 ABCC9O60706 1549 aa14.3□□□□□ -0.12
SMC6-205ENST00000430591 POTEDQ86YR6 584 aa13.89□□□□□ -0.19
SMC6-205ENST00000430591 DCAF8L2P0C7V8 631 aa13.64□□□□□ -0.23
SMC6-205ENST00000430591 MAPK8IP2Q13387 824 aaPredicted RBP13.61□□□□□ -0.23
SMC6-205ENST00000430591 RB1CC1Q8TDY2 1594 aa13.6□□□□□ -0.23
SMC6-205ENST00000430591 NACADO15069 1562 aa13.55□□□□□ -0.24
SMC6-205ENST00000430591 ZCCHC6Q5VYS8 1495 aaKnown RBP13.55□□□□□ -0.24
SMC6-205ENST00000430591 PPP4R3CPQ6ZMV5 832 aa13.49□□□□□ -0.25
SMC6-205ENST00000430591 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
SMC6-205ENST00000430591 UNC13AQ9UPW8 1703 aa13.47□□□□□ -0.25
SMC6-205ENST00000430591 DMRT2Q9Y5R5 561 aa13.44□□□□□ -0.26
SMC6-205ENST00000430591 MYO15BQ96JP2 1530 aa13.39□□□□□ -0.27
SMC6-205ENST00000430591 PABPN1Q86U42 306 aaKnown RBP eCLIP13.37□□□□□ -0.27
SMC6-205ENST00000430591 DCAF1Q9Y4B6 1507 aa13.36□□□□□ -0.27
SMC6-205ENST00000430591 BICRAQ9NZM4 1560 aa13.32□□□□□ -0.28
SMC6-205ENST00000430591 SCRIBQ14160 1630 aa13.31□□□□□ -0.28
SMC6-205ENST00000430591 DNAJC5BQ9UF47 199 aa13.23□□□□□ -0.29
SMC6-205ENST00000430591 CNKSR2Q8WXI2 1034 aa13.15□□□□□ -0.3
SMC6-205ENST00000430591 HOXD11P31277 338 aaPredicted RBP13.04□□□□□ -0.32
SMC6-205ENST00000430591 RNF216Q9NWF9 866 aaPredicted RBP12.99□□□□□ -0.33
SMC6-205ENST00000430591 SHROOM4Q9ULL8 1493 aa12.97□□□□□ -0.33
SMC6-205ENST00000430591 NCBP3Q53F19 620 aaKnown RBP12.96□□□□□ -0.33
SMC6-205ENST00000430591 EIF4G1Q04637 1599 aaKnown RBP12.92□□□□□ -0.34
SMC6-205ENST00000430591 CC2D2AQ9P2K1 1620 aa12.91□□□□□ -0.34
SMC6-205ENST00000430591 NPM3O75607 178 aaKnown RBP12.89□□□□□ -0.35
SMC6-205ENST00000430591 KCNA4P22459 653 aa12.89□□□□□ -0.35
SMC6-205ENST00000430591 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
SMC6-205ENST00000430591 CECR2Q9BXF3 1484 aa12.78□□□□□ -0.36
SMC6-205ENST00000430591 SMARCA4P51532 1647 aa12.66□□□□□ -0.38
SMC6-205ENST00000430591 MROH2BQ7Z745 1585 aa12.62□□□□□ -0.39
SMC6-205ENST00000430591 ATAD2BQ9ULI0 1458 aa12.58□□□□□ -0.4
SMC6-205ENST00000430591 BAZ1AQ9NRL2 1556 aaPredicted RBP12.56□□□□□ -0.4
SMC6-205ENST00000430591 NCAPD3P42695 1498 aa12.52□□□□□ -0.41
SMC6-205ENST00000430591 RNF39Q9H2S5 420 aa12.51□□□□□ -0.41
SMC6-205ENST00000430591 WIZO95785 1651 aa12.5□□□□□ -0.41
SMC6-205ENST00000430591 SMARCA2P51531 1590 aa12.49□□□□□ -0.41
SMC6-205ENST00000430591 PEG3Q9GZU2 1588 aa12.47□□□□□ -0.41
SMC6-205ENST00000430591 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
SMC6-205ENST00000430591 BAZ1BQ9UIG0 1483 aaKnown RBP12.45□□□□□ -0.42
SMC6-205ENST00000430591 NESP48681 1621 aa12.4□□□□□ -0.42
SMC6-205ENST00000430591 RSF1Q96T23 1441 aaPredicted RBP12.4□□□□□ -0.42
SMC6-205ENST00000430591 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.37□□□□□ -0.431e-7■■■□□ 16
SMC6-205ENST00000430591 CACNB1Q02641 598 aaPredicted RBP12.35□□□□□ -0.43
SMC6-205ENST00000430591 C1QBPQ07021 282 aaKnown RBP12.29□□□□□ -0.44
SMC6-205ENST00000430591 SLC4A2P04920 1241 aa12.28□□□□□ -0.44
SMC6-205ENST00000430591 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.45
SMC6-205ENST00000430591 KIF21AQ7Z4S6 1674 aa12.24□□□□□ -0.45
SMC6-205ENST00000430591 ERCC6Q03468 1493 aa12.23□□□□□ -0.45
SMC6-205ENST00000430591 U3KPZ7 1027 aaPredicted RBP12.22□□□□□ -0.45
SMC6-205ENST00000430591 LAMC3Q9Y6N6 1575 aa12.2□□□□□ -0.46
SMC6-205ENST00000430591 THOC2Q8NI27 1593 aaKnown RBP12.18□□□□□ -0.46
SMC6-205ENST00000430591 CADPSQ9ULU8 1353 aa12.16□□□□□ -0.46
SMC6-205ENST00000430591 CCDC88BA6NC98 1476 aa12.15□□□□□ -0.46
SMC6-205ENST00000430591 SLC4A1APQ9BWU0 796 aaKnown RBP12.15□□□□□ -0.46
SMC6-205ENST00000430591 CFTRP13569 1480 aa12.09□□□□□ -0.47
SMC6-205ENST00000430591 SUPT5HO00267 1087 aaKnown RBP12.09□□□□□ -0.47
SMC6-205ENST00000430591 PDS5BQ9NTI5 1447 aa12.08□□□□□ -0.48
SMC6-205ENST00000430591 CUX2O14529 1486 aa12.07□□□□□ -0.48
SMC6-205ENST00000430591 FANCD2Q9BXW9 1451 aa12.07□□□□□ -0.48
SMC6-205ENST00000430591 PRDM2Q13029 1718 aa12.05□□□□□ -0.48
SMC6-205ENST00000430591 MRC2Q9UBG0 1479 aa12.03□□□□□ -0.48
SMC6-205ENST00000430591 CEP164Q9UPV0 1460 aa12.03□□□□□ -0.48
SMC6-205ENST00000430591 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
SMC6-205ENST00000430591 WDR62O43379 1518 aa12□□□□□ -0.49
SMC6-205ENST00000430591 SPINK5Q9NQ38 1064 aaPredicted RBP11.98□□□□□ -0.49
SMC6-205ENST00000430591 ZBTB22O15209 634 aa11.91□□□□□ -0.5
SMC6-205ENST00000430591 FOXD4L1Q9NU39 408 aa11.89□□□□□ -0.51
SMC6-205ENST00000430591 TOPBP1Q92547 1522 aa11.89□□□□□ -0.51
SMC6-205ENST00000430591 CAPN15O75808 1086 aa11.87□□□□□ -0.51
SMC6-205ENST00000430591 MYCNP04198 464 aaPredicted RBP11.87□□□□□ -0.51
SMC6-205ENST00000430591 ZNF608Q9ULD9 1512 aaPredicted RBP11.85□□□□□ -0.51
SMC6-205ENST00000430591 DNMBPQ6XZF7 1577 aa11.84□□□□□ -0.51
SMC6-205ENST00000430591 CUX1P39880 1505 aa11.83□□□□□ -0.52
SMC6-205ENST00000430591 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.83□□□□□ -0.52
SMC6-205ENST00000430591 HNRNPUL2Q1KMD3 747 aaKnown RBP11.83□□□□□ -0.52
SMC6-205ENST00000430591 SAMD1Q6SPF0 538 aaPredicted RBP11.81□□□□□ -0.52
SMC6-205ENST00000430591 DSG3P32926 999 aa11.8□□□□□ -0.52
SMC6-205ENST00000430591 POLA1P09884 1462 aaPredicted RBP11.79□□□□□ -0.52
SMC6-205ENST00000430591 RAD54L2Q9Y4B4 1467 aa11.79□□□□□ -0.52
SMC6-205ENST00000430591 DNAJC5Q9H3Z4 198 aa11.79□□□□□ -0.52
SMC6-205ENST00000430591 TARBP1Q13395 1621 aaKnown RBP11.78□□□□□ -0.52
SMC6-205ENST00000430591 ABCC8Q09428 1581 aa11.78□□□□□ -0.52
SMC6-205ENST00000430591 FGD5Q6ZNL6 1462 aa11.76□□□□□ -0.53
SMC6-205ENST00000430591 TRHP20396 242 aaPredicted RBP11.76□□□□□ -0.53
SMC6-205ENST00000430591 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
SMC6-205ENST00000430591 APLP2Q06481 763 aa11.75□□□□□ -0.53
SMC6-205ENST00000430591 IFT140Q96RY7 1462 aa11.75□□□□□ -0.53
SMC6-205ENST00000430591 AQRO60306 1485 aaKnown RBP eCLIP11.74□□□□□ -0.532e-6■■□□□ 13.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms