RNA–Protein interactions for RNA: ENST00000427857.1

FAM41C-201, Transcript of family with sequence similarity 41 member C, humanhuman

TSL 3

Gene FAM41C, Length 446 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM41C-201ENST00000427857 AEBP2Q6ZN18 517 aaPredicted RBP16.42■□□□□ 0.22
FAM41C-201ENST00000427857 CHIC1Q5VXU3 224 aa15.69■□□□□ 0.1
FAM41C-201ENST00000427857 SENP3Q9H4L4 574 aaPredicted RBP13.98□□□□□ -0.17
FAM41C-201ENST00000427857 PHF23Q9BUL5 403 aaPredicted RBP13.81□□□□□ -0.2
FAM41C-201ENST00000427857 FOXD1Q16676 465 aa13.03□□□□□ -0.32
FAM41C-201ENST00000427857 NISCHQ9Y2I1 1504 aa12.96□□□□□ -0.33
FAM41C-201ENST00000427857 PLPPR3Q6T4P5 718 aa12.55□□□□□ -0.4
FAM41C-201ENST00000427857 PPP6R1Q9UPN7 881 aa12.25□□□□□ -0.45
FAM41C-201ENST00000427857 ADRA2BP18089 450 aa12.19□□□□□ -0.46
FAM41C-201ENST00000427857 PIAS4Q8N2W9 510 aaPredicted RBP12.16□□□□□ -0.46
FAM41C-201ENST00000427857 MSH5O43196 834 aa12.15□□□□□ -0.46
FAM41C-201ENST00000427857 POTEDQ86YR6 584 aa11.81□□□□□ -0.52
FAM41C-201ENST00000427857 CCDC180Q9P1Z9 1646 aa11.59□□□□□ -0.55
FAM41C-201ENST00000427857 ABCC9O60706 1549 aa11.38□□□□□ -0.59
FAM41C-201ENST00000427857 MAPK8IP2Q13387 824 aaPredicted RBP11.17□□□□□ -0.62
FAM41C-201ENST00000427857 SCAF1Q9H7N4 1312 aaKnown RBP11.15□□□□□ -0.62
FAM41C-201ENST00000427857 DMRT2Q9Y5R5 561 aa11.11□□□□□ -0.63
FAM41C-201ENST00000427857 PPP4R3CPQ6ZMV5 832 aa11.01□□□□□ -0.65
FAM41C-201ENST00000427857 RB1CC1Q8TDY2 1594 aa10.92□□□□□ -0.66
FAM41C-201ENST00000427857 NACADO15069 1562 aa10.87□□□□□ -0.67
FAM41C-201ENST00000427857 DCAF8L2P0C7V8 631 aa10.87□□□□□ -0.67
FAM41C-201ENST00000427857 CNKSR2Q8WXI2 1034 aa10.79□□□□□ -0.68
FAM41C-201ENST00000427857 ZCCHC6Q5VYS8 1495 aaKnown RBP10.78□□□□□ -0.68
FAM41C-201ENST00000427857 UNC13AQ9UPW8 1703 aa10.77□□□□□ -0.69
FAM41C-201ENST00000427857 MYO15BQ96JP2 1530 aa10.76□□□□□ -0.69
FAM41C-201ENST00000427857 HOXD11P31277 338 aaPredicted RBP10.76□□□□□ -0.69
FAM41C-201ENST00000427857 DCAF1Q9Y4B6 1507 aa10.7□□□□□ -0.7
FAM41C-201ENST00000427857 RNF216Q9NWF9 866 aaPredicted RBP10.68□□□□□ -0.7
FAM41C-201ENST00000427857 PABPN1Q86U42 306 aaKnown RBP eCLIP10.61□□□□□ -0.71
FAM41C-201ENST00000427857 BICRAQ9NZM4 1560 aa10.6□□□□□ -0.71
FAM41C-201ENST00000427857 NCBP3Q53F19 620 aaKnown RBP10.59□□□□□ -0.71
FAM41C-201ENST00000427857 SCRIBQ14160 1630 aa10.58□□□□□ -0.72
FAM41C-201ENST00000427857 DCAF8L1A6NGE4 600 aa10.54□□□□□ -0.72
FAM41C-201ENST00000427857 DNAJC5BQ9UF47 199 aa10.48□□□□□ -0.73
FAM41C-201ENST00000427857 NPM3O75607 178 aaKnown RBP10.46□□□□□ -0.73
FAM41C-201ENST00000427857 SHROOM4Q9ULL8 1493 aa10.42□□□□□ -0.74
FAM41C-201ENST00000427857 RNF39Q9H2S5 420 aa10.39□□□□□ -0.75
FAM41C-201ENST00000427857 CACNB1Q02641 598 aaPredicted RBP10.34□□□□□ -0.75
FAM41C-201ENST00000427857 KCNA4P22459 653 aa10.32□□□□□ -0.76
FAM41C-201ENST00000427857 EIF4G1Q04637 1599 aaKnown RBP10.31□□□□□ -0.76
FAM41C-201ENST00000427857 CC2D2AQ9P2K1 1620 aa10.3□□□□□ -0.76
FAM41C-201ENST00000427857 C1QBPQ07021 282 aaKnown RBP10.25□□□□□ -0.77
FAM41C-201ENST00000427857 CECR2Q9BXF3 1484 aa10.21□□□□□ -0.78
FAM41C-201ENST00000427857 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.17□□□□□ -0.78
FAM41C-201ENST00000427857 SMARCA4P51532 1647 aa10.1□□□□□ -0.79
FAM41C-201ENST00000427857 BAZ1AQ9NRL2 1556 aaPredicted RBP10.05□□□□□ -0.8
FAM41C-201ENST00000427857 ATAD2BQ9ULI0 1458 aa10.03□□□□□ -0.8
FAM41C-201ENST00000427857 SMARCA2P51531 1590 aa10.02□□□□□ -0.81
FAM41C-201ENST00000427857 U3KPZ7 1027 aaPredicted RBP10.01□□□□□ -0.81
FAM41C-201ENST00000427857 NCAPD3P42695 1498 aa10.01□□□□□ -0.81
FAM41C-201ENST00000427857 MROH2BQ7Z745 1585 aa10.01□□□□□ -0.81
FAM41C-201ENST00000427857 SLC4A2P04920 1241 aa9.99□□□□□ -0.81
FAM41C-201ENST00000427857 HMGXB3Q12766 1538 aa9.98□□□□□ -0.81
FAM41C-201ENST00000427857 PEG3Q9GZU2 1588 aa9.97□□□□□ -0.81
FAM41C-201ENST00000427857 BAZ1BQ9UIG0 1483 aaKnown RBP9.95□□□□□ -0.82
FAM41C-201ENST00000427857 WIZO95785 1651 aa9.93□□□□□ -0.82
FAM41C-201ENST00000427857 RSF1Q96T23 1441 aaPredicted RBP9.84□□□□□ -0.83
FAM41C-201ENST00000427857 NESP48681 1621 aa9.83□□□□□ -0.84
FAM41C-201ENST00000427857 SPINK5Q9NQ38 1064 aaPredicted RBP9.82□□□□□ -0.84
FAM41C-201ENST00000427857 ERCC6Q03468 1493 aa9.81□□□□□ -0.84
FAM41C-201ENST00000427857 LAMC3Q9Y6N6 1575 aa9.8□□□□□ -0.84
FAM41C-201ENST00000427857 TOP2AP11388 1531 aaKnown RBP9.77□□□□□ -0.84
FAM41C-201ENST00000427857 KIF21AQ7Z4S6 1674 aa9.77□□□□□ -0.85
FAM41C-201ENST00000427857 CAPN15O75808 1086 aa9.76□□□□□ -0.85
FAM41C-201ENST00000427857 DSG3P32926 999 aa9.75□□□□□ -0.85
FAM41C-201ENST00000427857 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.74□□□□□ -0.85
FAM41C-201ENST00000427857 HNRNPUL2Q1KMD3 747 aaKnown RBP9.74□□□□□ -0.85
FAM41C-201ENST00000427857 SLC4A1APQ9BWU0 796 aaKnown RBP9.74□□□□□ -0.85
FAM41C-201ENST00000427857 CADPSQ9ULU8 1353 aa9.72□□□□□ -0.85
FAM41C-201ENST00000427857 APLP2Q06481 763 aa9.71□□□□□ -0.86
FAM41C-201ENST00000427857 CUX2O14529 1486 aa9.71□□□□□ -0.86
FAM41C-201ENST00000427857 THOC2Q8NI27 1593 aaKnown RBP9.71□□□□□ -0.86
FAM41C-201ENST00000427857 PDS5BQ9NTI5 1447 aa9.7□□□□□ -0.86
FAM41C-201ENST00000427857 PRDM2Q13029 1718 aa9.69□□□□□ -0.86
FAM41C-201ENST00000427857 SAMD1Q6SPF0 538 aaPredicted RBP9.69□□□□□ -0.86
FAM41C-201ENST00000427857 MYCNP04198 464 aaPredicted RBP9.67□□□□□ -0.86
FAM41C-201ENST00000427857 CCDC88BA6NC98 1476 aa9.66□□□□□ -0.86
FAM41C-201ENST00000427857 CFTRP13569 1480 aa9.66□□□□□ -0.86
FAM41C-201ENST00000427857 ZNF219Q9P2Y4 722 aaPredicted RBP9.65□□□□□ -0.86
FAM41C-201ENST00000427857 TRHP20396 242 aaPredicted RBP9.63□□□□□ -0.87
FAM41C-201ENST00000427857 FANCD2Q9BXW9 1451 aa9.63□□□□□ -0.87
FAM41C-201ENST00000427857 CEP164Q9UPV0 1460 aa9.63□□□□□ -0.87
FAM41C-201ENST00000427857 MRC2Q9UBG0 1479 aa9.62□□□□□ -0.87
FAM41C-201ENST00000427857 FOXD4L1Q9NU39 408 aa9.61□□□□□ -0.87
FAM41C-201ENST00000427857 WDR62O43379 1518 aa9.6□□□□□ -0.87
FAM41C-201ENST00000427857 SUPT5HO00267 1087 aaKnown RBP9.57□□□□□ -0.88
FAM41C-201ENST00000427857 ABCB7O75027 752 aa9.54□□□□□ -0.88
FAM41C-201ENST00000427857 URB2Q14146 1524 aaKnown RBP9.54□□□□□ -0.88
FAM41C-201ENST00000427857 ZBTB22O15209 634 aa9.51□□□□□ -0.89
FAM41C-201ENST00000427857 TOPBP1Q92547 1522 aa9.48□□□□□ -0.89
FAM41C-201ENST00000427857 DNMBPQ6XZF7 1577 aa9.47□□□□□ -0.89
FAM41C-201ENST00000427857 DNAJC5Q9H3Z4 198 aa9.46□□□□□ -0.9
FAM41C-201ENST00000427857 ABCC8Q09428 1581 aa9.46□□□□□ -0.9
FAM41C-201ENST00000427857 ATF5Q9Y2D1 282 aaPredicted RBP9.44□□□□□ -0.9
FAM41C-201ENST00000427857 POLA2Q14181 598 aa9.42□□□□□ -0.9
FAM41C-201ENST00000427857 IFT140Q96RY7 1462 aa9.41□□□□□ -0.9
FAM41C-201ENST00000427857 TARBP1Q13395 1621 aaKnown RBP9.4□□□□□ -0.9
FAM41C-201ENST00000427857 CUX1P39880 1505 aa9.39□□□□□ -0.91
FAM41C-201ENST00000427857 ZNF608Q9ULD9 1512 aaPredicted RBP9.39□□□□□ -0.91
FAM41C-201ENST00000427857 POLA1P09884 1462 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms