RNA–Protein interactions for RNA: ENST00000424326.5

SCN7A-203, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

TSL 1 (best)

Gene SCN7A, Length 5,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-203ENST00000424326 NISCHQ9Y2I1 1504 aa15.07■□□□□ 0
SCN7A-203ENST00000424326 DCAF8L2P0C7V8 631 aa13.83□□□□□ -0.2
SCN7A-203ENST00000424326 SHROOM4Q9ULL8 1493 aa13.08□□□□□ -0.31
SCN7A-203ENST00000424326 SUPT5HO00267 1087 aaKnown RBP12.99□□□□□ -0.33
SCN7A-203ENST00000424326 CCDC180Q9P1Z9 1646 aa12.89□□□□□ -0.35
SCN7A-203ENST00000424326 ABCC9O60706 1549 aa12.68□□□□□ -0.38
SCN7A-203ENST00000424326 ZCCHC6Q5VYS8 1495 aaKnown RBP12.55□□□□□ -0.4
SCN7A-203ENST00000424326 NACADO15069 1562 aa12.31□□□□□ -0.44
SCN7A-203ENST00000424326 RB1CC1Q8TDY2 1594 aa12.31□□□□□ -0.44
SCN7A-203ENST00000424326 DCAF1Q9Y4B6 1507 aa12.31□□□□□ -0.44
SCN7A-203ENST00000424326 TRIM41Q8WV44 630 aa12.27□□□□□ -0.44
SCN7A-203ENST00000424326 PABPN1Q86U42 306 aaKnown RBP eCLIP12.22□□□□□ -0.45
SCN7A-203ENST00000424326 FAM9AQ8IZU1 332 aaPredicted RBP12.22□□□□□ -0.45
SCN7A-203ENST00000424326 SCRIBQ14160 1630 aa12.19□□□□□ -0.46
SCN7A-203ENST00000424326 APLP2Q06481 763 aa12.14□□□□□ -0.47
SCN7A-203ENST00000424326 MYO15BQ96JP2 1530 aa12.12□□□□□ -0.47
SCN7A-203ENST00000424326 EHMT2Q96KQ7 1210 aa12.03□□□□□ -0.48
SCN7A-203ENST00000424326 CHIC1Q5VXU3 224 aa11.96□□□□□ -0.49
SCN7A-203ENST00000424326 UBTFP17480 764 aaKnown RBP11.95□□□□□ -0.5
SCN7A-203ENST00000424326 BAZ1AQ9NRL2 1556 aaPredicted RBP11.83□□□□□ -0.52
SCN7A-203ENST00000424326 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
SCN7A-203ENST00000424326 RANGAP1P46060 587 aaPredicted RBP11.75□□□□□ -0.53
SCN7A-203ENST00000424326 BAZ1BQ9UIG0 1483 aaKnown RBP11.71□□□□□ -0.53
SCN7A-203ENST00000424326 ATP1B4Q9UN42 357 aaPredicted RBP11.71□□□□□ -0.54
SCN7A-203ENST00000424326 ZEB1P37275 1124 aaPredicted RBP11.66□□□□□ -0.54
SCN7A-203ENST00000424326 SMARCA2P51531 1590 aa11.64□□□□□ -0.55
SCN7A-203ENST00000424326 PCGF6Q9BYE7 350 aa11.63□□□□□ -0.55
SCN7A-203ENST00000424326 CECR2Q9BXF3 1484 aa11.62□□□□□ -0.55
SCN7A-203ENST00000424326 LOC105371045A0A1W2PR82 267 aa11.59□□□□□ -0.55
SCN7A-203ENST00000424326 CSRNP3Q8WYN3 585 aa11.59□□□□□ -0.55
SCN7A-203ENST00000424326 TTBK1Q5TCY1 1321 aaPredicted RBP11.58□□□□□ -0.55
SCN7A-203ENST00000424326 TRIM26Q12899 539 aaPredicted RBP11.58□□□□□ -0.56
SCN7A-203ENST00000424326 MROH2BQ7Z745 1585 aa11.55□□□□□ -0.56
SCN7A-203ENST00000424326 EEA1Q15075 1411 aa11.53□□□□□ -0.56
SCN7A-203ENST00000424326 TOP2AP11388 1531 aaKnown RBP11.49□□□□□ -0.57
SCN7A-203ENST00000424326 CCER1Q8TC90 406 aaPredicted RBP11.49□□□□□ -0.57
SCN7A-203ENST00000424326 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.48□□□□□ -0.57
SCN7A-203ENST00000424326 HNRNPUL2Q1KMD3 747 aaKnown RBP11.48□□□□□ -0.57
SCN7A-203ENST00000424326 SMARCA4P51532 1647 aa11.48□□□□□ -0.57
SCN7A-203ENST00000424326 WRNQ14191 1432 aaPredicted RBP eCLIP11.47□□□□□ -0.57
SCN7A-203ENST00000424326 ATAD2BQ9ULI0 1458 aa11.43□□□□□ -0.58
SCN7A-203ENST00000424326 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
SCN7A-203ENST00000424326 FBLN2P98095 1184 aa11.39□□□□□ -0.59
SCN7A-203ENST00000424326 WIZO95785 1651 aa11.38□□□□□ -0.59
SCN7A-203ENST00000424326 KIF27Q86VH2 1401 aa11.37□□□□□ -0.59
SCN7A-203ENST00000424326 PDS5BQ9NTI5 1447 aa11.37□□□□□ -0.59
SCN7A-203ENST00000424326 PPARGC1BQ86YN6 1023 aaKnown RBP11.35□□□□□ -0.59
SCN7A-203ENST00000424326 ERCC6Q03468 1493 aa11.33□□□□□ -0.6
SCN7A-203ENST00000424326 CDK11AQ9UQ88 783 aaPredicted RBP11.32□□□□□ -0.6
SCN7A-203ENST00000424326 GOLGA3Q08378 1498 aa11.32□□□□□ -0.6
SCN7A-203ENST00000424326 NCAPD3P42695 1498 aa11.32□□□□□ -0.6
SCN7A-203ENST00000424326 CADPSQ9ULU8 1353 aa11.31□□□□□ -0.6
SCN7A-203ENST00000424326 CEP164Q9UPV0 1460 aa11.29□□□□□ -0.6
SCN7A-203ENST00000424326 EIF4G1Q04637 1599 aaKnown RBP11.28□□□□□ -0.6
SCN7A-203ENST00000424326 MYT1LQ9UL68 1186 aa11.26□□□□□ -0.61
SCN7A-203ENST00000424326 ITGAEP38570 1179 aa11.26□□□□□ -0.61
SCN7A-203ENST00000424326 CHMP7Q8WUX9 453 aaPredicted RBP11.26□□□□□ -0.61
SCN7A-203ENST00000424326 ABCC8Q09428 1581 aa11.24□□□□□ -0.61
SCN7A-203ENST00000424326 FAM50AQ14320 339 aaKnown RBP11.23□□□□□ -0.61
SCN7A-203ENST00000424326 TNIKQ9UKE5 1360 aa11.23□□□□□ -0.61
SCN7A-203ENST00000424326 CLIP1P30622 1438 aa11.22□□□□□ -0.61
SCN7A-203ENST00000424326 HMGXB3Q12766 1538 aa11.21□□□□□ -0.62
SCN7A-203ENST00000424326 P3H3Q8IVL6 736 aa11.2□□□□□ -0.62
SCN7A-203ENST00000424326 BICRAQ9NZM4 1560 aa11.19□□□□□ -0.62
SCN7A-203ENST00000424326 CUX2O14529 1486 aa11.18□□□□□ -0.62
SCN7A-203ENST00000424326 HRCP23327 699 aa11.16□□□□□ -0.62
SCN7A-203ENST00000424326 CEP162Q5TB80 1403 aa11.15□□□□□ -0.62
SCN7A-203ENST00000424326 SOGA1O94964 1423 aa11.15□□□□□ -0.62
SCN7A-203ENST00000424326 NPM1P06748 294 aaKnown RBP eCLIP11.15□□□□□ -0.63
SCN7A-203ENST00000424326 CARMIL1Q5VZK9 1371 aa11.15□□□□□ -0.63
SCN7A-203ENST00000424326 FANCD2Q9BXW9 1451 aa11.13□□□□□ -0.63
SCN7A-203ENST00000424326 PELP1Q8IZL8 1130 aaKnown RBP11.13□□□□□ -0.63
SCN7A-203ENST00000424326 ACIN1Q9UKV3 1341 aaKnown RBP11.1□□□□□ -0.63
SCN7A-203ENST00000424326 CC2D2AQ9P2K1 1620 aa11.09□□□□□ -0.63
SCN7A-203ENST00000424326 TRIM52Q96A61 297 aa11.08□□□□□ -0.64
SCN7A-203ENST00000424326 FHAD1B1AJZ9 1412 aa11.08□□□□□ -0.64
SCN7A-203ENST00000424326 MTUS2Q5JR59 1369 aa11.07□□□□□ -0.64
SCN7A-203ENST00000424326 PEG3Q9GZU2 1588 aa11.07□□□□□ -0.64
SCN7A-203ENST00000424326 CFTRP13569 1480 aa11.07□□□□□ -0.64
SCN7A-203ENST00000424326 CENPBP07199 599 aaPredicted RBP11.06□□□□□ -0.64
SCN7A-203ENST00000424326 UNC13AQ9UPW8 1703 aa11.05□□□□□ -0.64
SCN7A-203ENST00000424326 RAPGEF2Q9Y4G8 1499 aa11.02□□□□□ -0.65
SCN7A-203ENST00000424326 ARID3CA6NKF2 412 aa11.01□□□□□ -0.65
SCN7A-203ENST00000424326 PLEKHD1A6NEE1 506 aa11□□□□□ -0.65
SCN7A-203ENST00000424326 CARMIL2Q6F5E8 1435 aa10.99□□□□□ -0.65
SCN7A-203ENST00000424326 ZNF777Q9ULD5 760 aaPredicted RBP10.99□□□□□ -0.65
SCN7A-203ENST00000424326 TDRD9Q8NDG6 1382 aaKnown RBP10.99□□□□□ -0.65
SCN7A-203ENST00000424326 FGD5Q6ZNL6 1462 aa10.96□□□□□ -0.66
SCN7A-203ENST00000424326 FMN1Q68DA7 1419 aa10.96□□□□□ -0.66
SCN7A-203ENST00000424326 TSPY4P0CV99 314 aa10.95□□□□□ -0.66
SCN7A-203ENST00000424326 TSPY10P0CW01 314 aa10.95□□□□□ -0.66
SCN7A-203ENST00000424326 VPS8Q8N3P4 1428 aa10.95□□□□□ -0.66
SCN7A-203ENST00000424326 LAMC3Q9Y6N6 1575 aa10.94□□□□□ -0.66
SCN7A-203ENST00000424326 MRC2Q9UBG0 1479 aa10.92□□□□□ -0.66
SCN7A-203ENST00000424326 GAPVD1Q14C86 1478 aa10.91□□□□□ -0.66
SCN7A-203ENST00000424326 NEUROD1Q13562 356 aa10.9□□□□□ -0.66
SCN7A-203ENST00000424326 TOP2BQ02880 1626 aa10.89□□□□□ -0.67
SCN7A-203ENST00000424326 IGF1RP08069 1367 aa10.87□□□□□ -0.67
SCN7A-203ENST00000424326 IFT140Q96RY7 1462 aa10.87□□□□□ -0.67
SCN7A-203ENST00000424326 DNMBPQ6XZF7 1577 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms