RNA–Protein interactions for RNA: ENST00000421422.1

ZHX3-204, Transcript of zinc fingers and homeoboxes 3, humanhuman

TSL 1 (best)

Gene ZHX3, Length 8,838 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZHX3-204ENST00000421422 NISCHQ9Y2I1 1504 aa16.65■□□□□ 0.26
ZHX3-204ENST00000421422 DCAF8L2P0C7V8 631 aa14.84□□□□□ -0.03
ZHX3-204ENST00000421422 CCDC180Q9P1Z9 1646 aa14.53□□□□□ -0.08
ZHX3-204ENST00000421422 SHROOM4Q9ULL8 1493 aa14.22□□□□□ -0.13
ZHX3-204ENST00000421422 SUPT5HO00267 1087 aaKnown RBP14.19□□□□□ -0.14
ZHX3-204ENST00000421422 ZCCHC6Q5VYS8 1495 aaKnown RBP13.92□□□□□ -0.18
ZHX3-204ENST00000421422 DCAF1Q9Y4B6 1507 aa13.74□□□□□ -0.21
ZHX3-204ENST00000421422 PELP1Q8IZL8 1130 aaKnown RBP13.69□□□□□ -0.22
ZHX3-204ENST00000421422 ABCC9O60706 1549 aa13.66□□□□□ -0.22
ZHX3-204ENST00000421422 NACADO15069 1562 aa13.64□□□□□ -0.23
ZHX3-204ENST00000421422 RB1CC1Q8TDY2 1594 aa13.59□□□□□ -0.23
ZHX3-204ENST00000421422 MYO15BQ96JP2 1530 aa13.55□□□□□ -0.24
ZHX3-204ENST00000421422 TRIM41Q8WV44 630 aa13.47□□□□□ -0.25
ZHX3-204ENST00000421422 SCRIBQ14160 1630 aa13.45□□□□□ -0.26
ZHX3-204ENST00000421422 APLP2Q06481 763 aa13.43□□□□□ -0.26
ZHX3-204ENST00000421422 FAM9AQ8IZU1 332 aaPredicted RBP13.42□□□□□ -0.26
ZHX3-204ENST00000421422 MYT1Q01538 1121 aa13.22□□□□□ -0.29
ZHX3-204ENST00000421422 CHIC1Q5VXU3 224 aa13.18□□□□□ -0.3
ZHX3-204ENST00000421422 BAZ1AQ9NRL2 1556 aaPredicted RBP13.16□□□□□ -0.3
ZHX3-204ENST00000421422 ZEB1P37275 1124 aaPredicted RBP13.14□□□□□ -0.31
ZHX3-204ENST00000421422 UBTFP17480 764 aaKnown RBP13.09□□□□□ -0.31
ZHX3-204ENST00000421422 CCER1Q8TC90 406 aaPredicted RBP13.04□□□□□ -0.32
ZHX3-204ENST00000421422 ERICH6Q7L0X2 663 aa13.01□□□□□ -0.33
ZHX3-204ENST00000421422 PABPN1Q86U42 306 aaKnown RBP eCLIP13.01□□□□□ -0.33
ZHX3-204ENST00000421422 RSF1Q96T23 1441 aaPredicted RBP12.97□□□□□ -0.33
ZHX3-204ENST00000421422 PCGF6Q9BYE7 350 aa12.95□□□□□ -0.34
ZHX3-204ENST00000421422 EHMT2Q96KQ7 1210 aa12.95□□□□□ -0.34
ZHX3-204ENST00000421422 SMARCA2P51531 1590 aa12.93□□□□□ -0.34
ZHX3-204ENST00000421422 TRIM26Q12899 539 aaPredicted RBP12.9□□□□□ -0.34
ZHX3-204ENST00000421422 EEA1Q15075 1411 aa12.9□□□□□ -0.34
ZHX3-204ENST00000421422 BAZ1BQ9UIG0 1483 aaKnown RBP12.89□□□□□ -0.35
ZHX3-204ENST00000421422 SMARCA4P51532 1647 aa12.78□□□□□ -0.36
ZHX3-204ENST00000421422 TOP2AP11388 1531 aaKnown RBP12.76□□□□□ -0.37
ZHX3-204ENST00000421422 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
ZHX3-204ENST00000421422 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
ZHX3-204ENST00000421422 MROH2BQ7Z745 1585 aa12.68□□□□□ -0.38
ZHX3-204ENST00000421422 RANGAP1P46060 587 aaPredicted RBP12.67□□□□□ -0.38
ZHX3-204ENST00000421422 WRNQ14191 1432 aaPredicted RBP eCLIP12.66□□□□□ -0.38
ZHX3-204ENST00000421422 LOC105371045A0A1W2PR82 267 aa12.64□□□□□ -0.39
ZHX3-204ENST00000421422 YTHDC1Q96MU7 727 aaKnown RBP12.63□□□□□ -0.39
ZHX3-204ENST00000421422 WIZO95785 1651 aa12.62□□□□□ -0.39
ZHX3-204ENST00000421422 ATP1B4Q9UN42 357 aaPredicted RBP12.62□□□□□ -0.39
ZHX3-204ENST00000421422 GOLGA3Q08378 1498 aa12.58□□□□□ -0.4
ZHX3-204ENST00000421422 TTBK1Q5TCY1 1321 aaPredicted RBP12.57□□□□□ -0.4
ZHX3-204ENST00000421422 CEP164Q9UPV0 1460 aa12.57□□□□□ -0.4
ZHX3-204ENST00000421422 KIF27Q86VH2 1401 aa12.56□□□□□ -0.4
ZHX3-204ENST00000421422 HRCP23327 699 aa12.56□□□□□ -0.4
ZHX3-204ENST00000421422 CENPBP07199 599 aaPredicted RBP12.56□□□□□ -0.4
ZHX3-204ENST00000421422 UNC13AQ9UPW8 1703 aa12.53□□□□□ -0.4
ZHX3-204ENST00000421422 CCDC88BA6NC98 1476 aa12.51□□□□□ -0.41
ZHX3-204ENST00000421422 CLIP1P30622 1438 aa12.48□□□□□ -0.41
ZHX3-204ENST00000421422 ATAD2BQ9ULI0 1458 aa12.48□□□□□ -0.41
ZHX3-204ENST00000421422 HMGXB3Q12766 1538 aa12.47□□□□□ -0.41
ZHX3-204ENST00000421422 ACIN1Q9UKV3 1341 aaKnown RBP12.46□□□□□ -0.41
ZHX3-204ENST00000421422 CDK11AQ9UQ88 783 aaPredicted RBP12.45□□□□□ -0.42
ZHX3-204ENST00000421422 NEFLP07196 543 aa12.45□□□□□ -0.42
ZHX3-204ENST00000421422 TNIKQ9UKE5 1360 aa12.44□□□□□ -0.42
ZHX3-204ENST00000421422 DAXXQ9UER7 740 aaPredicted RBP12.44□□□□□ -0.42
ZHX3-204ENST00000421422 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.43□□□□□ -0.42
ZHX3-204ENST00000421422 HNRNPUL2Q1KMD3 747 aaKnown RBP12.43□□□□□ -0.42
ZHX3-204ENST00000421422 ABCC8Q09428 1581 aa12.42□□□□□ -0.42
ZHX3-204ENST00000421422 PDS5BQ9NTI5 1447 aa12.42□□□□□ -0.42
ZHX3-204ENST00000421422 EIF4G1Q04637 1599 aaKnown RBP12.4□□□□□ -0.43
ZHX3-204ENST00000421422 CEP162Q5TB80 1403 aa12.39□□□□□ -0.43
ZHX3-204ENST00000421422 NCAPD3P42695 1498 aa12.39□□□□□ -0.43
ZHX3-204ENST00000421422 PEG3Q9GZU2 1588 aa12.38□□□□□ -0.43
ZHX3-204ENST00000421422 FHAD1B1AJZ9 1412 aa12.36□□□□□ -0.43
ZHX3-204ENST00000421422 CADPSQ9ULU8 1353 aa12.33□□□□□ -0.44
ZHX3-204ENST00000421422 ERCC6Q03468 1493 aa12.31□□□□□ -0.44
ZHX3-204ENST00000421422 PPARGC1BQ86YN6 1023 aaKnown RBP12.3□□□□□ -0.44
ZHX3-204ENST00000421422 BICRAQ9NZM4 1560 aa12.29□□□□□ -0.44
ZHX3-204ENST00000421422 FAM50AQ14320 339 aaKnown RBP12.25□□□□□ -0.45
ZHX3-204ENST00000421422 CUX2O14529 1486 aa12.25□□□□□ -0.45
ZHX3-204ENST00000421422 ITGAEP38570 1179 aa12.24□□□□□ -0.45
ZHX3-204ENST00000421422 VPS8Q8N3P4 1428 aa12.23□□□□□ -0.45
ZHX3-204ENST00000421422 FBLN2P98095 1184 aa12.22□□□□□ -0.45
ZHX3-204ENST00000421422 MTUS2Q5JR59 1369 aa12.22□□□□□ -0.45
ZHX3-204ENST00000421422 KIF21BO75037 1637 aa12.2□□□□□ -0.46
ZHX3-204ENST00000421422 FMN1Q68DA7 1419 aa12.19□□□□□ -0.46
ZHX3-204ENST00000421422 CARMIL1Q5VZK9 1371 aa12.19□□□□□ -0.46
ZHX3-204ENST00000421422 CFTRP13569 1480 aa12.19□□□□□ -0.46
ZHX3-204ENST00000421422 ERICH3Q5RHP9 1530 aa12.19□□□□□ -0.46
ZHX3-204ENST00000421422 TOP2BQ02880 1626 aa12.18□□□□□ -0.46
ZHX3-204ENST00000421422 CHMP7Q8WUX9 453 aaPredicted RBP12.18□□□□□ -0.46
ZHX3-204ENST00000421422 CLSPNQ9HAW4 1339 aa12.17□□□□□ -0.46
ZHX3-204ENST00000421422 SOGA1O94964 1423 aa12.16□□□□□ -0.46
ZHX3-204ENST00000421422 FANCD2Q9BXW9 1451 aa12.16□□□□□ -0.46
ZHX3-204ENST00000421422 PRDM2Q13029 1718 aa12.15□□□□□ -0.46
ZHX3-204ENST00000421422 CC2D2AQ9P2K1 1620 aa12.15□□□□□ -0.47
ZHX3-204ENST00000421422 RAPGEF2Q9Y4G8 1499 aa12.14□□□□□ -0.47
ZHX3-204ENST00000421422 MYT1LQ9UL68 1186 aa12.12□□□□□ -0.47
ZHX3-204ENST00000421422 LAMC3Q9Y6N6 1575 aa12.09□□□□□ -0.47
ZHX3-204ENST00000421422 DIEXFQ68CQ4 756 aaKnown RBP12.08□□□□□ -0.48
ZHX3-204ENST00000421422 CARMIL2Q6F5E8 1435 aa12.07□□□□□ -0.48
ZHX3-204ENST00000421422 TRIM52Q96A61 297 aa12.07□□□□□ -0.48
ZHX3-204ENST00000421422 ZNF316A6NFI3 1004 aaPredicted RBP12.05□□□□□ -0.48
ZHX3-204ENST00000421422 DNMBPQ6XZF7 1577 aa12.05□□□□□ -0.48
ZHX3-204ENST00000421422 P3H3Q8IVL6 736 aa12.04□□□□□ -0.48
ZHX3-204ENST00000421422 FGD5Q6ZNL6 1462 aa12.04□□□□□ -0.48
ZHX3-204ENST00000421422 SYNJ1O43426 1573 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms