RNA–Protein interactions for RNA: ENST00000418984.7

EEA1-202, Transcript of early endosome antigen 1, humanhuman

TSL 5

Gene EEA1, Length 2,542 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEA1-202ENST00000418984 NISCHQ9Y2I1 1504 aa32.43■■■□□ 2.78
EEA1-202ENST00000418984 HRCP23327 699 aa28.23■■■□□ 2.11
EEA1-202ENST00000418984 PPARGC1BQ86YN6 1023 aaKnown RBP27.91■■■□□ 2.06
EEA1-202ENST00000418984 CCDC180Q9P1Z9 1646 aa27.88■■■□□ 2.05
EEA1-202ENST00000418984 PCGF6Q9BYE7 350 aa27.64■■■□□ 2.02
EEA1-202ENST00000418984 SHROOM4Q9ULL8 1493 aa27.5■■□□□ 1.99
EEA1-202ENST00000418984 SUPT5HO00267 1087 aaKnown RBP27.45■■□□□ 1.98
EEA1-202ENST00000418984 MYO15BQ96JP2 1530 aa27.41■■□□□ 1.98
EEA1-202ENST00000418984 PELP1Q8IZL8 1130 aaKnown RBP27.39■■□□□ 1.98
EEA1-202ENST00000418984 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
EEA1-202ENST00000418984 ZCCHC6Q5VYS8 1495 aaKnown RBP27.25■■□□□ 1.95
EEA1-202ENST00000418984 SCAF1Q9H7N4 1312 aaKnown RBP27.01■■□□□ 1.91
EEA1-202ENST00000418984 CHIC1Q5VXU3 224 aa26.99■■□□□ 1.91
EEA1-202ENST00000418984 ABCC9O60706 1549 aa26.78■■□□□ 1.88
EEA1-202ENST00000418984 DCAF1Q9Y4B6 1507 aa26.59■■□□□ 1.85
EEA1-202ENST00000418984 LOC105371045A0A1W2PR82 267 aa26.57■■□□□ 1.84
EEA1-202ENST00000418984 TRIM26Q12899 539 aaPredicted RBP26.47■■□□□ 1.83
EEA1-202ENST00000418984 MYT1Q01538 1121 aa26.29■■□□□ 1.8
EEA1-202ENST00000418984 ZEB1P37275 1124 aaPredicted RBP26.2■■□□□ 1.78
EEA1-202ENST00000418984 SCRIBQ14160 1630 aa26.17■■□□□ 1.78
EEA1-202ENST00000418984 NEUROD1Q13562 356 aa26.16■■□□□ 1.78
EEA1-202ENST00000418984 ACIN1Q9UKV3 1341 aaKnown RBP26.12■■□□□ 1.77
EEA1-202ENST00000418984 GTF3C3Q9Y5Q9 886 aa26.02■■□□□ 1.76
EEA1-202ENST00000418984 NACADO15069 1562 aa26■■□□□ 1.75
EEA1-202ENST00000418984 RB1CC1Q8TDY2 1594 aa25.8■■□□□ 1.72
EEA1-202ENST00000418984 CENPBP07199 599 aaPredicted RBP25.62■■□□□ 1.69
EEA1-202ENST00000418984 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.54■■□□□ 1.68
EEA1-202ENST00000418984 DIEXFQ68CQ4 756 aaKnown RBP25.53■■□□□ 1.68
EEA1-202ENST00000418984 EHMT2Q96KQ7 1210 aa25.53■■□□□ 1.68
EEA1-202ENST00000418984 PABPN1Q86U42 306 aaKnown RBP eCLIP25.49■■□□□ 1.67
EEA1-202ENST00000418984 CECR2Q9BXF3 1484 aa25.46■■□□□ 1.67
EEA1-202ENST00000418984 FAM9AQ8IZU1 332 aaPredicted RBP25.45■■□□□ 1.67
EEA1-202ENST00000418984 UNC13AQ9UPW8 1703 aa25.45■■□□□ 1.67
EEA1-202ENST00000418984 CCER1Q8TC90 406 aaPredicted RBP25.38■■□□□ 1.65
EEA1-202ENST00000418984 RSF1Q96T23 1441 aaPredicted RBP25.37■■□□□ 1.65
EEA1-202ENST00000418984 YTHDC1Q96MU7 727 aaKnown RBP25.35■■□□□ 1.65
EEA1-202ENST00000418984 MROH2BQ7Z745 1585 aa25.23■■□□□ 1.63
EEA1-202ENST00000418984 TRIM41Q8WV44 630 aa25.19■■□□□ 1.62
EEA1-202ENST00000418984 BICRAQ9NZM4 1560 aa25.17■■□□□ 1.62
EEA1-202ENST00000418984 WIZO95785 1651 aa25.06■■□□□ 1.6
EEA1-202ENST00000418984 BCL11AQ9H165 835 aa25.01■■□□□ 1.59
EEA1-202ENST00000418984 TTBK1Q5TCY1 1321 aaPredicted RBP24.97■■□□□ 1.59
EEA1-202ENST00000418984 BAZ1AQ9NRL2 1556 aaPredicted RBP24.95■■□□□ 1.58
EEA1-202ENST00000418984 MIER1Q8N108 512 aa24.93■■□□□ 1.58
EEA1-202ENST00000418984 ZNF316A6NFI3 1004 aaPredicted RBP24.91■■□□□ 1.58
EEA1-202ENST00000418984 SMARCA4P51532 1647 aa24.88■■□□□ 1.57
EEA1-202ENST00000418984 ANP32EQ9BTT0 268 aa24.75■■□□□ 1.55
EEA1-202ENST00000418984 SUPT16HQ9Y5B9 1047 aaKnown RBP24.65■■□□□ 1.54
EEA1-202ENST00000418984 TSHZ2Q9NRE2 1034 aa24.64■■□□□ 1.54
EEA1-202ENST00000418984 CSRNP3Q8WYN3 585 aa24.64■■□□□ 1.53
EEA1-202ENST00000418984 TOP2AP11388 1531 aaKnown RBP24.57■■□□□ 1.52
EEA1-202ENST00000418984 CCDC88BA6NC98 1476 aa24.5■■□□□ 1.51
EEA1-202ENST00000418984 ATAD2BQ9ULI0 1458 aa24.46■■□□□ 1.51
EEA1-202ENST00000418984 SMARCA2P51531 1590 aa24.44■■□□□ 1.5
EEA1-202ENST00000418984 EIF4G1Q04637 1599 aaKnown RBP24.4■■□□□ 1.5
EEA1-202ENST00000418984 PEG3Q9GZU2 1588 aa24.36■■□□□ 1.49
EEA1-202ENST00000418984 BAZ1BQ9UIG0 1483 aaKnown RBP24.36■■□□□ 1.49
EEA1-202ENST00000418984 HNRNPUL2Q1KMD3 747 aaKnown RBP24.26■■□□□ 1.47
EEA1-202ENST00000418984 BCANQ96GW7 911 aa24.25■■□□□ 1.47
EEA1-202ENST00000418984 WRNQ14191 1432 aaPredicted RBP eCLIP24.24■■□□□ 1.47
EEA1-202ENST00000418984 ABCC8Q09428 1581 aa24.24■■□□□ 1.47
EEA1-202ENST00000418984 CLSPNQ9HAW4 1339 aa24.21■■□□□ 1.47
EEA1-202ENST00000418984 CEP162Q5TB80 1403 aa24.19■■□□□ 1.46
EEA1-202ENST00000418984 PRKCSHP14314 528 aaPredicted RBP24.18■■□□□ 1.46
EEA1-202ENST00000418984 NCAPD3P42695 1498 aa24.09■■□□□ 1.45
EEA1-202ENST00000418984 CC2D2AQ9P2K1 1620 aa24.04■■□□□ 1.44
EEA1-202ENST00000418984 KCNH8Q96L42 1107 aa24.03■■□□□ 1.44
EEA1-202ENST00000418984 RBM19Q9Y4C8 960 aaKnown RBP24■■□□□ 1.43
EEA1-202ENST00000418984 HMGXB3Q12766 1538 aa23.99■■□□□ 1.43
EEA1-202ENST00000418984 FKBP8Q14318 412 aa23.95■■□□□ 1.43
EEA1-202ENST00000418984 MSH5O43196 834 aa23.92■■□□□ 1.42
EEA1-202ENST00000418984 UBTFP17480 764 aaKnown RBP23.9■■□□□ 1.42
EEA1-202ENST00000418984 TNIKQ9UKE5 1360 aa23.88■■□□□ 1.41
EEA1-202ENST00000418984 DNAJC5BQ9UF47 199 aa23.88■■□□□ 1.41
EEA1-202ENST00000418984 ITGAEP38570 1179 aa23.87■■□□□ 1.41
EEA1-202ENST00000418984 SOGA1O94964 1423 aa23.87■■□□□ 1.41
EEA1-202ENST00000418984 SYNJ1O43426 1573 aa23.8■■□□□ 1.4
EEA1-202ENST00000418984 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
EEA1-202ENST00000418984 CFTRP13569 1480 aa23.68■■□□□ 1.38
EEA1-202ENST00000418984 DHX57Q6P158 1386 aaKnown RBP23.67■■□□□ 1.38
EEA1-202ENST00000418984 NESP48681 1621 aa23.61■■□□□ 1.37
EEA1-202ENST00000418984 CADPSQ9ULU8 1353 aa23.61■■□□□ 1.37
EEA1-202ENST00000418984 NEFLP07196 543 aa23.58■■□□□ 1.36
EEA1-202ENST00000418984 RANGAP1P46060 587 aaPredicted RBP23.56■■□□□ 1.36
EEA1-202ENST00000418984 GOLGA3Q08378 1498 aa23.55■■□□□ 1.36
EEA1-202ENST00000418984 ERICH6Q7L0X2 663 aa23.55■■□□□ 1.36
EEA1-202ENST00000418984 TRIM52Q96A61 297 aa23.54■■□□□ 1.36
EEA1-202ENST00000418984 CUX1P39880 1505 aa23.53■■□□□ 1.36
EEA1-202ENST00000418984 ANO8Q9HCE9 1232 aaPredicted RBP23.53■■□□□ 1.36
EEA1-202ENST00000418984 TOP2BQ02880 1626 aa23.5■■□□□ 1.35
EEA1-202ENST00000418984 DEKP35659 375 aaKnown RBP23.5■■□□□ 1.35
EEA1-202ENST00000418984 CLIP1P30622 1438 aa23.48■■□□□ 1.35
EEA1-202ENST00000418984 APLP2Q06481 763 aa23.47■■□□□ 1.35
EEA1-202ENST00000418984 DDX10Q13206 875 aaKnown RBP23.46■■□□□ 1.35
EEA1-202ENST00000418984 FANCIQ9NVI1 1328 aa23.44■■□□□ 1.34
EEA1-202ENST00000418984 VPS8Q8N3P4 1428 aa23.42■■□□□ 1.34
EEA1-202ENST00000418984 IRX6P78412 446 aaPredicted RBP23.41■■□□□ 1.34
EEA1-202ENST00000418984 BIVM-ERCC5R4GMW8 1640 aa23.41■■□□□ 1.34
EEA1-202ENST00000418984 FANCD2Q9BXW9 1451 aa23.4■■□□□ 1.34
EEA1-202ENST00000418984 EEA1Q15075 1411 aa23.39■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms