RNA–Protein interactions for RNA: ENST00000415906.1

LPP-202, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 2

Gene LPP, Length 888 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-202ENST00000415906 AEBP2Q6ZN18 517 aaPredicted RBP26.76■■□□□ 1.87
LPP-202ENST00000415906 CHIC1Q5VXU3 224 aa25.66■■□□□ 1.7
LPP-202ENST00000415906 SENP3Q9H4L4 574 aaPredicted RBP22.72■■□□□ 1.23
LPP-202ENST00000415906 PHF23Q9BUL5 403 aaPredicted RBP22.54■■□□□ 1.2
LPP-202ENST00000415906 NISCHQ9Y2I1 1504 aa21.41■■□□□ 1.02
LPP-202ENST00000415906 FOXD1Q16676 465 aa21.18■□□□□ 0.98
LPP-202ENST00000415906 PLPPR3Q6T4P5 718 aa20.57■□□□□ 0.88
LPP-202ENST00000415906 PPP6R1Q9UPN7 881 aa20.04■□□□□ 0.8
LPP-202ENST00000415906 ADRA2BP18089 450 aa19.93■□□□□ 0.78
LPP-202ENST00000415906 PIAS4Q8N2W9 510 aaPredicted RBP19.77■□□□□ 0.76
LPP-202ENST00000415906 MSH5O43196 834 aa19.68■□□□□ 0.74
LPP-202ENST00000415906 ABCC9O60706 1549 aa19.16■□□□□ 0.66
LPP-202ENST00000415906 CCDC180Q9P1Z9 1646 aa19.07■□□□□ 0.64
LPP-202ENST00000415906 POTEDQ86YR6 584 aa18.77■□□□□ 0.6
LPP-202ENST00000415906 MAPK8IP2Q13387 824 aaPredicted RBP18.25■□□□□ 0.51
LPP-202ENST00000415906 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
LPP-202ENST00000415906 RB1CC1Q8TDY2 1594 aa18.17■□□□□ 0.5
LPP-202ENST00000415906 DCAF8L2P0C7V8 631 aa18.17■□□□□ 0.5
LPP-202ENST00000415906 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
LPP-202ENST00000415906 DMRT2Q9Y5R5 561 aa18.1■□□□□ 0.49
LPP-202ENST00000415906 PPP4R3CPQ6ZMV5 832 aa18.07■□□□□ 0.48
LPP-202ENST00000415906 NACADO15069 1562 aa18.07■□□□□ 0.48
LPP-202ENST00000415906 PABPN1Q86U42 306 aaKnown RBP eCLIP17.92■□□□□ 0.46
LPP-202ENST00000415906 MYO15BQ96JP2 1530 aa17.82■□□□□ 0.44
LPP-202ENST00000415906 ZCCHC6Q5VYS8 1495 aaKnown RBP17.75■□□□□ 0.43
LPP-202ENST00000415906 UNC13AQ9UPW8 1703 aa17.72■□□□□ 0.43
LPP-202ENST00000415906 CNKSR2Q8WXI2 1034 aa17.68■□□□□ 0.42
LPP-202ENST00000415906 BICRAQ9NZM4 1560 aa17.68■□□□□ 0.42
LPP-202ENST00000415906 DCAF1Q9Y4B6 1507 aa17.64■□□□□ 0.41
LPP-202ENST00000415906 HOXD11P31277 338 aaPredicted RBP17.57■□□□□ 0.4
LPP-202ENST00000415906 SCRIBQ14160 1630 aa17.5■□□□□ 0.39
LPP-202ENST00000415906 RNF216Q9NWF9 866 aaPredicted RBP17.47■□□□□ 0.39
LPP-202ENST00000415906 NCBP3Q53F19 620 aaKnown RBP17.42■□□□□ 0.38
LPP-202ENST00000415906 SHROOM4Q9ULL8 1493 aa17.37■□□□□ 0.37
LPP-202ENST00000415906 CC2D2AQ9P2K1 1620 aa17.25■□□□□ 0.35
LPP-202ENST00000415906 CECR2Q9BXF3 1484 aa17.24■□□□□ 0.35
LPP-202ENST00000415906 EIF4G1Q04637 1599 aaKnown RBP17.23■□□□□ 0.35
LPP-202ENST00000415906 NPM3O75607 178 aaKnown RBP17.21■□□□□ 0.35
LPP-202ENST00000415906 DCAF8L1A6NGE4 600 aa17.16■□□□□ 0.34
LPP-202ENST00000415906 KCNA4P22459 653 aa17.11■□□□□ 0.33
LPP-202ENST00000415906 DNAJC5Q9H3Z4 198 aa17■□□□□ 0.31
LPP-202ENST00000415906 RNF39Q9H2S5 420 aa16.87■□□□□ 0.29
LPP-202ENST00000415906 NCAPD3P42695 1498 aa16.73■□□□□ 0.27
LPP-202ENST00000415906 ATAD2BQ9ULI0 1458 aa16.71■□□□□ 0.27
LPP-202ENST00000415906 CACNB1Q02641 598 aaPredicted RBP16.67■□□□□ 0.26
LPP-202ENST00000415906 SMARCA4P51532 1647 aa16.66■□□□□ 0.26
LPP-202ENST00000415906 C1QBPQ07021 282 aaKnown RBP16.61■□□□□ 0.25
LPP-202ENST00000415906 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.61■□□□□ 0.25
LPP-202ENST00000415906 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
LPP-202ENST00000415906 BAZ1AQ9NRL2 1556 aaPredicted RBP16.59■□□□□ 0.25
LPP-202ENST00000415906 HMGXB3Q12766 1538 aa16.56■□□□□ 0.24
LPP-202ENST00000415906 MROH2BQ7Z745 1585 aa16.54■□□□□ 0.24
LPP-202ENST00000415906 BAZ1BQ9UIG0 1483 aaKnown RBP16.53■□□□□ 0.24
LPP-202ENST00000415906 ERCC6Q03468 1493 aa16.52■□□□□ 0.23
LPP-202ENST00000415906 NESP48681 1621 aa16.49■□□□□ 0.23
LPP-202ENST00000415906 PEG3Q9GZU2 1588 aa16.47■□□□□ 0.23
LPP-202ENST00000415906 SLC4A2P04920 1241 aa16.42■□□□□ 0.22
LPP-202ENST00000415906 CUX2O14529 1486 aa16.41■□□□□ 0.22
LPP-202ENST00000415906 U3KPZ7 1027 aaPredicted RBP16.38■□□□□ 0.21
LPP-202ENST00000415906 WIZO95785 1651 aa16.3■□□□□ 0.2
LPP-202ENST00000415906 LAMC3Q9Y6N6 1575 aa16.29■□□□□ 0.2
LPP-202ENST00000415906 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
LPP-202ENST00000415906 PDS5BQ9NTI5 1447 aa16.24■□□□□ 0.19
LPP-202ENST00000415906 RSF1Q96T23 1441 aaPredicted RBP16.23■□□□□ 0.19
LPP-202ENST00000415906 THOC2Q8NI27 1593 aaKnown RBP16.22■□□□□ 0.19
LPP-202ENST00000415906 KIF21AQ7Z4S6 1674 aa16.18■□□□□ 0.18
LPP-202ENST00000415906 SLC4A1APQ9BWU0 796 aaKnown RBP16.17■□□□□ 0.18
LPP-202ENST00000415906 MRC2Q9UBG0 1479 aa16.1■□□□□ 0.17
LPP-202ENST00000415906 TOP2AP11388 1531 aaKnown RBP16.09■□□□□ 0.17
LPP-202ENST00000415906 CFTRP13569 1480 aa16.06■□□□□ 0.16
LPP-202ENST00000415906 FANCD2Q9BXW9 1451 aa16.05■□□□□ 0.16
LPP-202ENST00000415906 CEP164Q9UPV0 1460 aa16.04■□□□□ 0.16
LPP-202ENST00000415906 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
LPP-202ENST00000415906 WDR62O43379 1518 aa16.03■□□□□ 0.16
LPP-202ENST00000415906 CCDC88BA6NC98 1476 aa15.97■□□□□ 0.15
LPP-202ENST00000415906 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.95■□□□□ 0.14
LPP-202ENST00000415906 HNRNPUL2Q1KMD3 747 aaKnown RBP15.95■□□□□ 0.14
LPP-202ENST00000415906 URB2Q14146 1524 aaKnown RBP15.93■□□□□ 0.14
LPP-202ENST00000415906 CAPN15O75808 1086 aa15.91■□□□□ 0.14
LPP-202ENST00000415906 TRIM41Q8WV44 630 aa15.9■□□□□ 0.14
LPP-202ENST00000415906 MYCNP04198 464 aaPredicted RBP15.89■□□□□ 0.13
LPP-202ENST00000415906 SAMD1Q6SPF0 538 aaPredicted RBP15.89■□□□□ 0.13
LPP-202ENST00000415906 DSG3P32926 999 aa15.87■□□□□ 0.13
LPP-202ENST00000415906 APLP2Q06481 763 aa15.87■□□□□ 0.13
LPP-202ENST00000415906 FOXD4L1Q9NU39 408 aa15.87■□□□□ 0.13
LPP-202ENST00000415906 ZBTB22O15209 634 aa15.78■□□□□ 0.12
LPP-202ENST00000415906 PRDM2Q13029 1718 aa15.76■□□□□ 0.11
LPP-202ENST00000415906 TOPBP1Q92547 1522 aa15.75■□□□□ 0.11
LPP-202ENST00000415906 OSCARQ8IYS5 282 aa15.75■□□□□ 0.11
LPP-202ENST00000415906 ZNF219Q9P2Y4 722 aaPredicted RBP15.75■□□□□ 0.11
LPP-202ENST00000415906 ZNF608Q9ULD9 1512 aaPredicted RBP15.74■□□□□ 0.11
LPP-202ENST00000415906 IFT140Q96RY7 1462 aa15.72■□□□□ 0.11
LPP-202ENST00000415906 TRHP20396 242 aaPredicted RBP15.72■□□□□ 0.11
LPP-202ENST00000415906 ABCC8Q09428 1581 aa15.67■□□□□ 0.1
LPP-202ENST00000415906 DNMBPQ6XZF7 1577 aa15.66■□□□□ 0.1
LPP-202ENST00000415906 SUPT5HO00267 1087 aaKnown RBP15.65■□□□□ 0.1
LPP-202ENST00000415906 AQRO60306 1485 aaKnown RBP eCLIP15.62■□□□□ 0.09
LPP-202ENST00000415906 POLA1P09884 1462 aaPredicted RBP15.6■□□□□ 0.09
LPP-202ENST00000415906 EIF4G3O43432 1585 aaKnown RBP15.59■□□□□ 0.09
LPP-202ENST00000415906 RAD54L2Q9Y4B4 1467 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms