RNA–Protein interactions for RNA: ENST00000415191.6

C2CD3-205, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 2,587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-205ENST00000415191 NISCHQ9Y2I1 1504 aa40.45■■■■■ 4.07
C2CD3-205ENST00000415191 SHROOM4Q9ULL8 1493 aa34.45■■■■□ 3.11
C2CD3-205ENST00000415191 CCDC180Q9P1Z9 1646 aa34.43■■■■□ 3.1
C2CD3-205ENST00000415191 ZCCHC6Q5VYS8 1495 aaKnown RBP34.22■■■■□ 3.07
C2CD3-205ENST00000415191 SUPT5HO00267 1087 aaKnown RBP33.79■■■■□ 3
C2CD3-205ENST00000415191 DCAF8L2P0C7V8 631 aa33.52■■■□□ 2.96
C2CD3-205ENST00000415191 DCAF1Q9Y4B6 1507 aa33.2■■■□□ 2.9
C2CD3-205ENST00000415191 CHIC1Q5VXU3 224 aa32.85■■■□□ 2.85
C2CD3-205ENST00000415191 MYO15BQ96JP2 1530 aa32.72■■■□□ 2.83
C2CD3-205ENST00000415191 ABCC9O60706 1549 aa32.3■■■□□ 2.76
C2CD3-205ENST00000415191 SCRIBQ14160 1630 aa32.25■■■□□ 2.75
C2CD3-205ENST00000415191 RSF1Q96T23 1441 aaPredicted RBP32■■■□□ 2.71
C2CD3-205ENST00000415191 LOC105371045A0A1W2PR82 267 aa31.86■■■□□ 2.69
C2CD3-205ENST00000415191 NACADO15069 1562 aa31.82■■■□□ 2.68
C2CD3-205ENST00000415191 HRCP23327 699 aa31.82■■■□□ 2.68
C2CD3-205ENST00000415191 PCGF6Q9BYE7 350 aa31.82■■■□□ 2.68
C2CD3-205ENST00000415191 RB1CC1Q8TDY2 1594 aa31.68■■■□□ 2.66
C2CD3-205ENST00000415191 CECR2Q9BXF3 1484 aa31.54■■■□□ 2.64
C2CD3-205ENST00000415191 TRIM41Q8WV44 630 aa31.49■■■□□ 2.63
C2CD3-205ENST00000415191 MROH2BQ7Z745 1585 aa31.44■■■□□ 2.62
C2CD3-205ENST00000415191 WIZO95785 1651 aa31.29■■■□□ 2.6
C2CD3-205ENST00000415191 TRIM26Q12899 539 aaPredicted RBP31.23■■■□□ 2.59
C2CD3-205ENST00000415191 FAM9AQ8IZU1 332 aaPredicted RBP31.21■■■□□ 2.59
C2CD3-205ENST00000415191 PPARGC1BQ86YN6 1023 aaKnown RBP31.14■■■□□ 2.58
C2CD3-205ENST00000415191 BAZ1AQ9NRL2 1556 aaPredicted RBP31.1■■■□□ 2.57
C2CD3-205ENST00000415191 EHMT2Q96KQ7 1210 aa30.94■■■□□ 2.54
C2CD3-205ENST00000415191 UNC13AQ9UPW8 1703 aa30.88■■■□□ 2.53
C2CD3-205ENST00000415191 EIF4G1Q04637 1599 aaKnown RBP30.86■■■□□ 2.53
C2CD3-205ENST00000415191 SMARCA4P51532 1647 aa30.82■■■□□ 2.52
C2CD3-205ENST00000415191 TOP2AP11388 1531 aaKnown RBP30.8■■■□□ 2.52
C2CD3-205ENST00000415191 CCDC88BA6NC98 1476 aa30.65■■■□□ 2.5
C2CD3-205ENST00000415191 SMARCA2P51531 1590 aa30.63■■■□□ 2.49
C2CD3-205ENST00000415191 ABCC8Q09428 1581 aa30.58■■■□□ 2.49
C2CD3-205ENST00000415191 ZEB1P37275 1124 aaPredicted RBP30.55■■■□□ 2.48
C2CD3-205ENST00000415191 PABPN1Q86U42 306 aaKnown RBP eCLIP30.46■■■□□ 2.47
C2CD3-205ENST00000415191 BICRAQ9NZM4 1560 aa30.45■■■□□ 2.46
C2CD3-205ENST00000415191 SOGA1O94964 1423 aa30.28■■■□□ 2.44
C2CD3-205ENST00000415191 PEG3Q9GZU2 1588 aa30.22■■■□□ 2.43
C2CD3-205ENST00000415191 CEP162Q5TB80 1403 aa30.15■■■□□ 2.42
C2CD3-205ENST00000415191 EEA1Q15075 1411 aa30.15■■■□□ 2.42
C2CD3-205ENST00000415191 RUSC2Q8N2Y8 1516 aa30.12■■■□□ 2.41
C2CD3-205ENST00000415191 WRNQ14191 1432 aaPredicted RBP eCLIP30.11■■■□□ 2.41
C2CD3-205ENST00000415191 CSRNP3Q8WYN3 585 aa30.11■■■□□ 2.41
C2CD3-205ENST00000415191 TNIKQ9UKE5 1360 aa30.1■■■□□ 2.41
C2CD3-205ENST00000415191 ATAD2BQ9ULI0 1458 aa30.01■■■□□ 2.39
C2CD3-205ENST00000415191 UBTFP17480 764 aaKnown RBP30.01■■■□□ 2.39
C2CD3-205ENST00000415191 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.98■■■□□ 2.39
C2CD3-205ENST00000415191 TTBK1Q5TCY1 1321 aaPredicted RBP29.96■■■□□ 2.39
C2CD3-205ENST00000415191 GOLGA3Q08378 1498 aa29.95■■■□□ 2.38
C2CD3-205ENST00000415191 BAZ1BQ9UIG0 1483 aaKnown RBP29.95■■■□□ 2.38
C2CD3-205ENST00000415191 SYNJ1O43426 1573 aa29.93■■■□□ 2.38
C2CD3-205ENST00000415191 CCER1Q8TC90 406 aaPredicted RBP29.92■■■□□ 2.38
C2CD3-205ENST00000415191 CEP164Q9UPV0 1460 aa29.78■■■□□ 2.36
C2CD3-205ENST00000415191 KIF21BO75037 1637 aa29.75■■■□□ 2.35
C2CD3-205ENST00000415191 CLIP1P30622 1438 aa29.6■■■□□ 2.33
C2CD3-205ENST00000415191 TOP2BQ02880 1626 aa29.57■■■□□ 2.32
C2CD3-205ENST00000415191 RAPGEF2Q9Y4G8 1499 aa29.55■■■□□ 2.32
C2CD3-205ENST00000415191 VPS8Q8N3P4 1428 aa29.47■■■□□ 2.31
C2CD3-205ENST00000415191 BIVM-ERCC5R4GMW8 1640 aa29.47■■■□□ 2.31
C2CD3-205ENST00000415191 HMGXB3Q12766 1538 aa29.44■■■□□ 2.3
C2CD3-205ENST00000415191 NCAPD3P42695 1498 aa29.43■■■□□ 2.3
C2CD3-205ENST00000415191 RANGAP1P46060 587 aaPredicted RBP29.39■■■□□ 2.3
C2CD3-205ENST00000415191 APLP2Q06481 763 aa29.34■■■□□ 2.29
C2CD3-205ENST00000415191 HNRNPUL2Q1KMD3 747 aaKnown RBP29.32■■■□□ 2.28
C2CD3-205ENST00000415191 DIEXFQ68CQ4 756 aaKnown RBP29.31■■■□□ 2.28
C2CD3-205ENST00000415191 SCAF1Q9H7N4 1312 aaKnown RBP29.28■■■□□ 2.28
C2CD3-205ENST00000415191 CUX1P39880 1505 aa29.28■■■□□ 2.28
C2CD3-205ENST00000415191 ERICH3Q5RHP9 1530 aa29.27■■■□□ 2.28
C2CD3-205ENST00000415191 PRXQ9BXM0 1461 aa29.26■■■□□ 2.28
C2CD3-205ENST00000415191 CFTRP13569 1480 aa29.2■■■□□ 2.26
C2CD3-205ENST00000415191 KIF27Q86VH2 1401 aa29.15■■■□□ 2.26
C2CD3-205ENST00000415191 ARAP1Q96P48 1450 aa29.12■■■□□ 2.25
C2CD3-205ENST00000415191 ZNF316A6NFI3 1004 aaPredicted RBP29.1■■■□□ 2.25
C2CD3-205ENST00000415191 ACIN1Q9UKV3 1341 aaKnown RBP29.04■■■□□ 2.24
C2CD3-205ENST00000415191 PRDM2Q13029 1718 aa29.02■■■□□ 2.24
C2CD3-205ENST00000415191 NEUROD1Q13562 356 aa29■■■□□ 2.23
C2CD3-205ENST00000415191 KANK4Q5T7N3 995 aaPredicted RBP28.94■■■□□ 2.22
C2CD3-205ENST00000415191 CENPBP07199 599 aaPredicted RBP28.91■■■□□ 2.22
C2CD3-205ENST00000415191 CADPSQ9ULU8 1353 aa28.87■■■□□ 2.21
C2CD3-205ENST00000415191 CUX2O14529 1486 aa28.87■■■□□ 2.21
C2CD3-205ENST00000415191 ARHGAP35Q9NRY4 1499 aa28.87■■■□□ 2.21
C2CD3-205ENST00000415191 IGF1RP08069 1367 aa28.81■■■□□ 2.2
C2CD3-205ENST00000415191 RRBP1Q9P2E9 1410 aaKnown RBP28.77■■■□□ 2.2
C2CD3-205ENST00000415191 FGD5Q6ZNL6 1462 aa28.76■■■□□ 2.19
C2CD3-205ENST00000415191 DHX57Q6P158 1386 aaKnown RBP28.75■■■□□ 2.19
C2CD3-205ENST00000415191 CLSPNQ9HAW4 1339 aa28.73■■■□□ 2.19
C2CD3-205ENST00000415191 CC2D2AQ9P2K1 1620 aa28.71■■■□□ 2.19
C2CD3-205ENST00000415191 GTF3C3Q9Y5Q9 886 aa28.7■■■□□ 2.19
C2CD3-205ENST00000415191 CARMIL1Q5VZK9 1371 aa28.7■■■□□ 2.19
C2CD3-205ENST00000415191 MIER1Q8N108 512 aa28.67■■■□□ 2.18
C2CD3-205ENST00000415191 CCNB3Q8WWL7 1395 aa28.66■■■□□ 2.18
C2CD3-205ENST00000415191 PELP1Q8IZL8 1130 aaKnown RBP28.63■■■□□ 2.17
C2CD3-205ENST00000415191 YTHDC1Q96MU7 727 aaKnown RBP28.61■■■□□ 2.17
C2CD3-205ENST00000415191 FANCD2Q9BXW9 1451 aa28.6■■■□□ 2.17
C2CD3-205ENST00000415191 TIAM1Q13009 1591 aa28.57■■■□□ 2.16
C2CD3-205ENST00000415191 ITGAEP38570 1179 aa28.55■■■□□ 2.16
C2CD3-205ENST00000415191 MAP3K1Q13233 1512 aa28.53■■■□□ 2.16
C2CD3-205ENST00000415191 DNMBPQ6XZF7 1577 aa28.48■■■□□ 2.15
C2CD3-205ENST00000415191 RAD54L2Q9Y4B4 1467 aa28.46■■■□□ 2.15
C2CD3-205ENST00000415191 LRRC9Q6ZRR7 1453 aa28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms