RNA–Protein interactions for RNA: ENST00000414887.1

SNX3P1X-201, Transcript of sorting nexin 3 pseudogene 1 X-linked, humanhuman

BASIC

Gene SNX3P1X, Length 175 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3P1X-201ENST00000414887 ILDR1Q86SU0 546 aaPredicted RBP2.21□□□□□ -2.06
SNX3P1X-201ENST00000414887 RBAK-RBAKDNI3L0D1 243 aa2.2□□□□□ -2.06
SNX3P1X-201ENST00000414887 DNAJC5Q9H3Z4 198 aa2.01□□□□□ -2.09
SNX3P1X-201ENST00000414887 IGSF5Q9NSI5 407 aa1.96□□□□□ -2.1
SNX3P1X-201ENST00000414887 SOCS7O14512 581 aa1.81□□□□□ -2.12
SNX3P1X-201ENST00000414887 IFFO2Q5TF58 517 aa1.8□□□□□ -2.12
SNX3P1X-201ENST00000414887 UNC79Q9P2D8 2635 aa1.77□□□□□ -2.13
SNX3P1X-201ENST00000414887 PCDH10Q9P2E7 1040 aa1.76□□□□□ -2.13
SNX3P1X-201ENST00000414887 SLC34A2O95436 690 aa1.73□□□□□ -2.13
SNX3P1X-201ENST00000414887 TRIM41Q8WV44 630 aa1.61□□□□□ -2.15
SNX3P1X-201ENST00000414887 LMTK3Q96Q04 1460 aa1.61□□□□□ -2.15
SNX3P1X-201ENST00000414887 ILDR2Q71H61 639 aa1.6□□□□□ -2.15
SNX3P1X-201ENST00000414887 KMT2BQ9UMN6 2715 aaPredicted RBP1.59□□□□□ -2.16
SNX3P1X-201ENST00000414887 AEBP2Q6ZN18 517 aaPredicted RBP1.57□□□□□ -2.16
SNX3P1X-201ENST00000414887 DACH1Q9UI36 760 aa1.53□□□□□ -2.16
SNX3P1X-201ENST00000414887 PKD1L2Q7Z442 2459 aa1.5□□□□□ -2.17
SNX3P1X-201ENST00000414887 MPNDQ8N594 471 aa1.49□□□□□ -2.17
SNX3P1X-201ENST00000414887 COL26A1Q96A83 441 aa1.48□□□□□ -2.17
SNX3P1X-201ENST00000414887 RP1L1Q8IWN7 2480 aaPredicted RBP1.47□□□□□ -2.17
SNX3P1X-201ENST00000414887 CACNA1AO00555 2505 aa1.45□□□□□ -2.18
SNX3P1X-201ENST00000414887 TMEM121BQ9BXQ6 578 aaPredicted RBP1.37□□□□□ -2.19
SNX3P1X-201ENST00000414887 USP24Q9UPU5 2620 aa1.3□□□□□ -2.2
SNX3P1X-201ENST00000414887 DISP3Q9P2K9 1392 aa1.29□□□□□ -2.2
SNX3P1X-201ENST00000414887 FBXO41Q8TF61 875 aa1.27□□□□□ -2.21
SNX3P1X-201ENST00000414887 KRTAP17-1Q9BYP8 105 aa1.26□□□□□ -2.21
SNX3P1X-201ENST00000414887 PITPNM2Q9BZ72 1349 aa1.22□□□□□ -2.21
SNX3P1X-201ENST00000414887 UBR4Q5T4S7 5183 aa1.22□□□□□ -2.21
SNX3P1X-201ENST00000414887 DLL1O00548 723 aa1.22□□□□□ -2.21
SNX3P1X-201ENST00000414887 EVX2Q03828 476 aa1.22□□□□□ -2.21
SNX3P1X-201ENST00000414887 GPR98Q8WXG9 6306 aa1.21□□□□□ -2.22
SNX3P1X-201ENST00000414887 PPP6R1Q9UPN7 881 aa1.21□□□□□ -2.22
SNX3P1X-201ENST00000414887 CACNA1GO43497 2377 aa1.16□□□□□ -2.22
SNX3P1X-201ENST00000414887 DNAJC5BQ9UF47 199 aa1.16□□□□□ -2.22
SNX3P1X-201ENST00000414887 COL6A3P12111 3177 aa1.15□□□□□ -2.23
SNX3P1X-201ENST00000414887 KRTAP9-6A0A140TA67 174 aa1.14□□□□□ -2.23
SNX3P1X-201ENST00000414887 SNX27Q96L92 541 aa1.14□□□□□ -2.23
SNX3P1X-201ENST00000414887 LURAP1LQ8IV03 231 aa1.13□□□□□ -2.23
SNX3P1X-201ENST00000414887 SLC4A5Q9BY07 1137 aa1.13□□□□□ -2.23
SNX3P1X-201ENST00000414887 CUL9Q8IWT3 2517 aa1.12□□□□□ -2.23
SNX3P1X-201ENST00000414887 NOTCH1P46531 2555 aa1.08□□□□□ -2.24
SNX3P1X-201ENST00000414887 ZNF462Q96JM2 2506 aa1.08□□□□□ -2.24
SNX3P1X-201ENST00000414887 BAHCC1Q9P281 2608 aa1.07□□□□□ -2.24
SNX3P1X-201ENST00000414887 KRT38O76015 456 aa1.07□□□□□ -2.24
SNX3P1X-201ENST00000414887 TRPM4Q8TD43 1214 aa1.07□□□□□ -2.24
SNX3P1X-201ENST00000414887 TRANK1O15050 2925 aa1.07□□□□□ -2.24
SNX3P1X-201ENST00000414887 ZSWIM6Q9HCJ5 1215 aa1.06□□□□□ -2.24
SNX3P1X-201ENST00000414887 CHD8Q9HCK8 2581 aa1.06□□□□□ -2.24
SNX3P1X-201ENST00000414887 SLC51AQ86UW1 340 aa1.05□□□□□ -2.24
SNX3P1X-201ENST00000414887 PCLOQ9Y6V0 5065 aa1.05□□□□□ -2.24
SNX3P1X-201ENST00000414887 TEP1Q99973 2627 aaKnown RBP1.04□□□□□ -2.24
SNX3P1X-201ENST00000414887 KIAA1109Q2LD37 5005 aa1.04□□□□□ -2.24
SNX3P1X-201ENST00000414887 MUC2Q02817 5179 aa1.04□□□□□ -2.24
SNX3P1X-201ENST00000414887 TAOK2Q9UL54 1235 aa1.03□□□□□ -2.24
SNX3P1X-201ENST00000414887 FAM117BQ6P1L5 589 aa1.02□□□□□ -2.25
SNX3P1X-201ENST00000414887 MACF1Q9UPN3 7388 aaKnown RBP1.02□□□□□ -2.25
SNX3P1X-201ENST00000414887 SPATA31D1Q6ZQQ2 1576 aa1.01□□□□□ -2.25
SNX3P1X-201ENST00000414887 PRELPP51888 382 aa1.01□□□□□ -2.25
SNX3P1X-201ENST00000414887 KCTD2Q14681 263 aa1.01□□□□□ -2.25
SNX3P1X-201ENST00000414887 PTPN13Q12923 2485 aa1.01□□□□□ -2.25
SNX3P1X-201ENST00000414887 ABCA2Q9BZC7 2435 aa1.01□□□□□ -2.25
SNX3P1X-201ENST00000414887 MAST4O15021 2626 aa0.99□□□□□ -2.25
SNX3P1X-201ENST00000414887 USP9XQ93008 2570 aaPredicted RBP0.99□□□□□ -2.25
SNX3P1X-201ENST00000414887 UBXN11Q5T124 520 aa0.99□□□□□ -2.25
SNX3P1X-201ENST00000414887 CAPN15O75808 1086 aa0.98□□□□□ -2.25
SNX3P1X-201ENST00000414887 SETXQ7Z333 2677 aaKnown RBP0.98□□□□□ -2.25
SNX3P1X-201ENST00000414887 FBN3Q75N90 2809 aa0.97□□□□□ -2.25
SNX3P1X-201ENST00000414887 HELZ2Q9BYK8 2649 aaKnown RBP0.96□□□□□ -2.26
SNX3P1X-201ENST00000414887 SENP3-EIF4A1A0A087X0R7 540 aa0.96□□□□□ -2.26
SNX3P1X-201ENST00000414887 SRCAPQ6ZRS2 3230 aa0.96□□□□□ -2.26
SNX3P1X-201ENST00000414887 SETD2Q9BYW2 2564 aaPredicted RBP0.96□□□□□ -2.26
SNX3P1X-201ENST00000414887 STAB1Q9NY15 2570 aa0.95□□□□□ -2.26
SNX3P1X-201ENST00000414887 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.95□□□□□ -2.26
SNX3P1X-201ENST00000414887 CRCT1Q9UGL9 99 aa0.95□□□□□ -2.26
SNX3P1X-201ENST00000414887 JMJD1CQ15652 2540 aa0.94□□□□□ -2.26
SNX3P1X-201ENST00000414887 NCOR2Q9Y618 2525 aa0.94□□□□□ -2.26
SNX3P1X-201ENST00000414887 KRTAP9-7A8MTY7 169 aa0.94□□□□□ -2.26
SNX3P1X-201ENST00000414887 PLPPR3Q6T4P5 718 aa0.94□□□□□ -2.26
SNX3P1X-201ENST00000414887 KRTAP9-2Q9BYQ4 174 aa0.94□□□□□ -2.26
SNX3P1X-201ENST00000414887 GAR1Q9NY12 217 aaKnown RBP0.94□□□□□ -2.26
SNX3P1X-201ENST00000414887 ANKRD17O75179 2603 aaKnown RBP0.94□□□□□ -2.26
SNX3P1X-201ENST00000414887 COL6A5A8TX70 2615 aa0.93□□□□□ -2.26
SNX3P1X-201ENST00000414887 AHNAKQ09666 5890 aaKnown RBP0.93□□□□□ -2.26
SNX3P1X-201ENST00000414887 NCOR1O75376 2440 aa0.91□□□□□ -2.26
SNX3P1X-201ENST00000414887 SYNE2Q8WXH0 6885 aaKnown RBP0.91□□□□□ -2.26
SNX3P1X-201ENST00000414887 AHNAK2Q8IVF2 5795 aa0.91□□□□□ -2.26
SNX3P1X-201ENST00000414887 VASPP50552 380 aaPredicted RBP0.91□□□□□ -2.26
SNX3P1X-201ENST00000414887 SERBP1Q8NC51 408 aaKnown RBP eCLIP0.91□□□□□ -2.26
SNX3P1X-201ENST00000414887 ATRXP46100 2492 aa0.91□□□□□ -2.26
SNX3P1X-201ENST00000414887 RYR1P21817 5038 aa0.9□□□□□ -2.26
SNX3P1X-201ENST00000414887 VWFP04275 2813 aa0.9□□□□□ -2.26
SNX3P1X-201ENST00000414887 NOTCH2Q04721 2471 aa0.9□□□□□ -2.27
SNX3P1X-201ENST00000414887 RGS17Q9UGC6 210 aaPredicted RBP0.9□□□□□ -2.27
SNX3P1X-201ENST00000414887 ERCC6L2Q5T890 1561 aa0.9□□□□□ -2.27
SNX3P1X-201ENST00000414887 HOXD11P31277 338 aaPredicted RBP0.89□□□□□ -2.27
SNX3P1X-201ENST00000414887 KHSRPQ92945 711 aaKnown RBP eCLIP0.89□□□□□ -2.27
SNX3P1X-201ENST00000414887 ANKHD1Q8IWZ3 2542 aaKnown RBP0.89□□□□□ -2.27
SNX3P1X-201ENST00000414887 MYO18BQ8IUG5 2567 aa0.89□□□□□ -2.27
SNX3P1X-201ENST00000414887 NAV2Q8IVL1 2488 aa0.88□□□□□ -2.27
SNX3P1X-201ENST00000414887 RYR2Q92736 4967 aa0.88□□□□□ -2.27
SNX3P1X-201ENST00000414887 NEBP20929 6669 aa0.87□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms