RNA–Protein interactions for RNA: ENST00000410056.7

SLC3A1-208, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 1,426 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-208ENST00000410056 AEBP2Q6ZN18 517 aaPredicted RBP28.52■■■□□ 2.16
SLC3A1-208ENST00000410056 CHIC1Q5VXU3 224 aa27.42■■□□□ 1.98
SLC3A1-208ENST00000410056 SENP3Q9H4L4 574 aaPredicted RBP24.44■■□□□ 1.5
SLC3A1-208ENST00000410056 PHF23Q9BUL5 403 aaPredicted RBP24.08■■□□□ 1.44
SLC3A1-208ENST00000410056 FOXD1Q16676 465 aa22.65■■□□□ 1.22
SLC3A1-208ENST00000410056 NISCHQ9Y2I1 1504 aa22.17■■□□□ 1.14
SLC3A1-208ENST00000410056 PLPPR3Q6T4P5 718 aa22.07■■□□□ 1.12
SLC3A1-208ENST00000410056 PPP6R1Q9UPN7 881 aa21.3■■□□□ 1
SLC3A1-208ENST00000410056 ADRA2BP18089 450 aa21.26■□□□□ 0.99
SLC3A1-208ENST00000410056 PIAS4Q8N2W9 510 aaPredicted RBP21.24■□□□□ 0.99
SLC3A1-208ENST00000410056 MSH5O43196 834 aa21.22■□□□□ 0.99
SLC3A1-208ENST00000410056 ABCC9O60706 1549 aa20.42■□□□□ 0.86
SLC3A1-208ENST00000410056 POTEDQ86YR6 584 aa20.18■□□□□ 0.82
SLC3A1-208ENST00000410056 CCDC180Q9P1Z9 1646 aa20.03■□□□□ 0.8
SLC3A1-208ENST00000410056 SCAF1Q9H7N4 1312 aaKnown RBP19.64■□□□□ 0.73
SLC3A1-208ENST00000410056 DNAJC5BQ9UF47 199 aa19.61■□□□□ 0.73
SLC3A1-208ENST00000410056 MAPK8IP2Q13387 824 aaPredicted RBP19.42■□□□□ 0.7
SLC3A1-208ENST00000410056 DMRT2Q9Y5R5 561 aa19.4■□□□□ 0.7
SLC3A1-208ENST00000410056 PPP4R3CPQ6ZMV5 832 aa19.32■□□□□ 0.68
SLC3A1-208ENST00000410056 RB1CC1Q8TDY2 1594 aa19.26■□□□□ 0.67
SLC3A1-208ENST00000410056 NACADO15069 1562 aa19.06■□□□□ 0.64
SLC3A1-208ENST00000410056 PABPN1Q86U42 306 aaKnown RBP eCLIP18.98■□□□□ 0.63
SLC3A1-208ENST00000410056 CNKSR2Q8WXI2 1034 aa18.95■□□□□ 0.62
SLC3A1-208ENST00000410056 UNC13AQ9UPW8 1703 aa18.81■□□□□ 0.6
SLC3A1-208ENST00000410056 DCAF8L2P0C7V8 631 aa18.81■□□□□ 0.6
SLC3A1-208ENST00000410056 HOXD11P31277 338 aaPredicted RBP18.79■□□□□ 0.6
SLC3A1-208ENST00000410056 BICRAQ9NZM4 1560 aa18.77■□□□□ 0.6
SLC3A1-208ENST00000410056 NCBP3Q53F19 620 aaKnown RBP18.74■□□□□ 0.59
SLC3A1-208ENST00000410056 RNF216Q9NWF9 866 aaPredicted RBP18.73■□□□□ 0.59
SLC3A1-208ENST00000410056 MYO15BQ96JP2 1530 aa18.71■□□□□ 0.59
SLC3A1-208ENST00000410056 DCAF8L1A6NGE4 600 aa18.49■□□□□ 0.55
SLC3A1-208ENST00000410056 SHROOM4Q9ULL8 1493 aa18.46■□□□□ 0.55
SLC3A1-208ENST00000410056 CECR2Q9BXF3 1484 aa18.45■□□□□ 0.54
SLC3A1-208ENST00000410056 CC2D2AQ9P2K1 1620 aa18.44■□□□□ 0.54
SLC3A1-208ENST00000410056 NPM3O75607 178 aaKnown RBP18.36■□□□□ 0.53
SLC3A1-208ENST00000410056 DCAF1Q9Y4B6 1507 aa18.31■□□□□ 0.52
SLC3A1-208ENST00000410056 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
SLC3A1-208ENST00000410056 DNAJC5Q9H3Z4 198 aa18.29■□□□□ 0.52
SLC3A1-208ENST00000410056 ZCCHC6Q5VYS8 1495 aaKnown RBP18.28■□□□□ 0.52
SLC3A1-208ENST00000410056 SCRIBQ14160 1630 aa18.2■□□□□ 0.5
SLC3A1-208ENST00000410056 KCNA4P22459 653 aa18.18■□□□□ 0.5
SLC3A1-208ENST00000410056 RNF39Q9H2S5 420 aa18.08■□□□□ 0.49
SLC3A1-208ENST00000410056 CACNB1Q02641 598 aaPredicted RBP17.98■□□□□ 0.47
SLC3A1-208ENST00000410056 C1QBPQ07021 282 aaKnown RBP17.89■□□□□ 0.45
SLC3A1-208ENST00000410056 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.87■□□□□ 0.45
SLC3A1-208ENST00000410056 CUX2O14529 1486 aa17.79■□□□□ 0.44
SLC3A1-208ENST00000410056 NCAPD3P42695 1498 aa17.64■□□□□ 0.41
SLC3A1-208ENST00000410056 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
SLC3A1-208ENST00000410056 ATAD2BQ9ULI0 1458 aa17.51■□□□□ 0.39
SLC3A1-208ENST00000410056 U3KPZ7 1027 aaPredicted RBP17.49■□□□□ 0.39
SLC3A1-208ENST00000410056 NESP48681 1621 aa17.46■□□□□ 0.39
SLC3A1-208ENST00000410056 SLC4A2P04920 1241 aa17.45■□□□□ 0.38
SLC3A1-208ENST00000410056 HMGXB3Q12766 1538 aa17.43■□□□□ 0.38
SLC3A1-208ENST00000410056 SMARCA2P51531 1590 aa17.4■□□□□ 0.38
SLC3A1-208ENST00000410056 SMARCA4P51532 1647 aa17.35■□□□□ 0.37
SLC3A1-208ENST00000410056 THOC2Q8NI27 1593 aaKnown RBP17.35■□□□□ 0.37
SLC3A1-208ENST00000410056 BAZ1BQ9UIG0 1483 aaKnown RBP17.27■□□□□ 0.36
SLC3A1-208ENST00000410056 SLC4A1APQ9BWU0 796 aaKnown RBP17.27■□□□□ 0.35
SLC3A1-208ENST00000410056 LAMC3Q9Y6N6 1575 aa17.25■□□□□ 0.35
SLC3A1-208ENST00000410056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.23■□□□□ 0.35
SLC3A1-208ENST00000410056 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
SLC3A1-208ENST00000410056 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
SLC3A1-208ENST00000410056 TRIM41Q8WV44 630 aa17.21■□□□□ 0.35
SLC3A1-208ENST00000410056 BAZ1AQ9NRL2 1556 aaPredicted RBP17.21■□□□□ 0.35
SLC3A1-208ENST00000410056 APLP2Q06481 763 aa17.21■□□□□ 0.34
SLC3A1-208ENST00000410056 PDS5BQ9NTI5 1447 aa17.17■□□□□ 0.34
SLC3A1-208ENST00000410056 KIF21AQ7Z4S6 1674 aa17.17■□□□□ 0.34
SLC3A1-208ENST00000410056 CAPN15O75808 1086 aa17.12■□□□□ 0.33
SLC3A1-208ENST00000410056 SPINK5Q9NQ38 1064 aaPredicted RBP17.12■□□□□ 0.33
SLC3A1-208ENST00000410056 SAMD1Q6SPF0 538 aaPredicted RBP17.11■□□□□ 0.33
SLC3A1-208ENST00000410056 MROH2BQ7Z745 1585 aa17.08■□□□□ 0.32
SLC3A1-208ENST00000410056 CADPSQ9ULU8 1353 aa17.07■□□□□ 0.32
SLC3A1-208ENST00000410056 MRC2Q9UBG0 1479 aa17.05■□□□□ 0.32
SLC3A1-208ENST00000410056 MYCNP04198 464 aaPredicted RBP17.04■□□□□ 0.32
SLC3A1-208ENST00000410056 WDR62O43379 1518 aa17.03■□□□□ 0.32
SLC3A1-208ENST00000410056 DSG3P32926 999 aa16.98■□□□□ 0.31
SLC3A1-208ENST00000410056 FOXD4L1Q9NU39 408 aa16.98■□□□□ 0.31
SLC3A1-208ENST00000410056 ZNF219Q9P2Y4 722 aaPredicted RBP16.98■□□□□ 0.31
SLC3A1-208ENST00000410056 OSCARQ8IYS5 282 aa16.92■□□□□ 0.3
SLC3A1-208ENST00000410056 CEP164Q9UPV0 1460 aa16.88■□□□□ 0.29
SLC3A1-208ENST00000410056 TRHP20396 242 aaPredicted RBP16.87■□□□□ 0.29
SLC3A1-208ENST00000410056 FANCD2Q9BXW9 1451 aa16.85■□□□□ 0.29
SLC3A1-208ENST00000410056 WIZO95785 1651 aa16.82■□□□□ 0.28
SLC3A1-208ENST00000410056 CFTRP13569 1480 aa16.79■□□□□ 0.28
SLC3A1-208ENST00000410056 URB2Q14146 1524 aaKnown RBP16.76■□□□□ 0.27
SLC3A1-208ENST00000410056 RIMBP3CA6NJZ7 1639 aa16.72■□□□□ 0.27
SLC3A1-208ENST00000410056 RIMBP3BA6NNM3 1639 aa16.72■□□□□ 0.27
SLC3A1-208ENST00000410056 RIMBP3Q9UFD9 1639 aa16.72■□□□□ 0.27
SLC3A1-208ENST00000410056 ZBTB22O15209 634 aa16.7■□□□□ 0.26
SLC3A1-208ENST00000410056 ABCB7O75027 752 aa16.69■□□□□ 0.26
SLC3A1-208ENST00000410056 ARHGEF11O15085 1522 aa16.64■□□□□ 0.25
SLC3A1-208ENST00000410056 ZNF608Q9ULD9 1512 aaPredicted RBP16.61■□□□□ 0.25
SLC3A1-208ENST00000410056 RSF1Q96T23 1441 aaPredicted RBP16.6■□□□□ 0.25
SLC3A1-208ENST00000410056 TOP2AP11388 1531 aaKnown RBP16.59■□□□□ 0.25
SLC3A1-208ENST00000410056 IFT140Q96RY7 1462 aa16.58■□□□□ 0.25
SLC3A1-208ENST00000410056 CYB5RLQ6IPT4 315 aa16.53■□□□□ 0.24
SLC3A1-208ENST00000410056 ATXN8OSP0DMR3 200 aa16.53■□□□□ 0.24
SLC3A1-208ENST00000410056 POLA2Q14181 598 aa16.51■□□□□ 0.23
SLC3A1-208ENST00000410056 PRDM2Q13029 1718 aa16.49■□□□□ 0.23
SLC3A1-208ENST00000410056 ATF5Q9Y2D1 282 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms