RNA–Protein interactions for RNA: ENST00000409302.1

C1D-203, Transcript of C1D nuclear receptor corepressor, humanhuman

APPRIS P1 TSL 5 BASIC

Gene C1D, Length 772 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1D-203ENST00000409302 AEBP2Q6ZN18 517 aaPredicted RBP24.4■■□□□ 1.5
C1D-203ENST00000409302 CHIC1Q5VXU3 224 aa22.91■■□□□ 1.26
C1D-203ENST00000409302 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
C1D-203ENST00000409302 PHF23Q9BUL5 403 aaPredicted RBP20.61■□□□□ 0.89
C1D-203ENST00000409302 FOXD1Q16676 465 aa19.54■□□□□ 0.72
C1D-203ENST00000409302 POTEDQ86YR6 584 aa18.76■□□□□ 0.59
C1D-203ENST00000409302 MSH5O43196 834 aa18.54■□□□□ 0.56
C1D-203ENST00000409302 PIAS4Q8N2W9 510 aaPredicted RBP18.18■□□□□ 0.5
C1D-203ENST00000409302 PLPPR3Q6T4P5 718 aa18.07■□□□□ 0.48
C1D-203ENST00000409302 PPP6R1Q9UPN7 881 aa17.9■□□□□ 0.46
C1D-203ENST00000409302 ADRA2BP18089 450 aa17.83■□□□□ 0.44
C1D-203ENST00000409302 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
C1D-203ENST00000409302 DMRT2Q9Y5R5 561 aa16.54■□□□□ 0.24
C1D-203ENST00000409302 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
C1D-203ENST00000409302 SCAF1Q9H7N4 1312 aaKnown RBP16.45■□□□□ 0.22
C1D-203ENST00000409302 DNAJC5BQ9UF47 199 aa16.43■□□□□ 0.22
C1D-203ENST00000409302 ABCC9O60706 1549 aa16.28■□□□□ 0.2
C1D-203ENST00000409302 CACNB1Q02641 598 aaPredicted RBP16.14■□□□□ 0.17
C1D-203ENST00000409302 DNAJC5Q9H3Z4 198 aa15.94■□□□□ 0.14
C1D-203ENST00000409302 DCAF8L1A6NGE4 600 aa15.87■□□□□ 0.13
C1D-203ENST00000409302 HOXD11P31277 338 aaPredicted RBP15.78■□□□□ 0.12
C1D-203ENST00000409302 PPP4R3CPQ6ZMV5 832 aa15.74■□□□□ 0.11
C1D-203ENST00000409302 RNF39Q9H2S5 420 aa15.74■□□□□ 0.11
C1D-203ENST00000409302 CNKSR2Q8WXI2 1034 aa15.59■□□□□ 0.09
C1D-203ENST00000409302 RNF216Q9NWF9 866 aaPredicted RBP15.56■□□□□ 0.08
C1D-203ENST00000409302 C1QBPQ07021 282 aaKnown RBP15.53■□□□□ 0.08
C1D-203ENST00000409302 NCBP3Q53F19 620 aaKnown RBP15.08■□□□□ 0
C1D-203ENST00000409302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.03■□□□□ -0
C1D-203ENST00000409302 PABPN1Q86U42 306 aaKnown RBP eCLIP14.98□□□□□ -0.01
C1D-203ENST00000409302 CCDC180Q9P1Z9 1646 aa14.94□□□□□ -0.02
C1D-203ENST00000409302 RB1CC1Q8TDY2 1594 aa14.84□□□□□ -0.03
C1D-203ENST00000409302 TRIM41Q8WV44 630 aa14.8□□□□□ -0.04
C1D-203ENST00000409302 NPM3O75607 178 aaKnown RBP14.77□□□□□ -0.05
C1D-203ENST00000409302 CECR2Q9BXF3 1484 aa14.76□□□□□ -0.05
C1D-203ENST00000409302 POTEHQ6S545 545 aa14.64□□□□□ -0.07
C1D-203ENST00000409302 U3KPZ7 1027 aaPredicted RBP14.63□□□□□ -0.07
C1D-203ENST00000409302 CC2D2AQ9P2K1 1620 aa14.59□□□□□ -0.07
C1D-203ENST00000409302 DSG3P32926 999 aa14.58□□□□□ -0.08
C1D-203ENST00000409302 CAPN15O75808 1086 aa14.57□□□□□ -0.08
C1D-203ENST00000409302 SPINK5Q9NQ38 1064 aaPredicted RBP14.52□□□□□ -0.09
C1D-203ENST00000409302 UNC13AQ9UPW8 1703 aa14.5□□□□□ -0.09
C1D-203ENST00000409302 BICRAQ9NZM4 1560 aa14.5□□□□□ -0.09
C1D-203ENST00000409302 CUX2O14529 1486 aa14.48□□□□□ -0.09
C1D-203ENST00000409302 NACADO15069 1562 aa14.4□□□□□ -0.1
C1D-203ENST00000409302 KCNA4P22459 653 aa14.36□□□□□ -0.11
C1D-203ENST00000409302 DCAF8L2P0C7V8 631 aa14.31□□□□□ -0.12
C1D-203ENST00000409302 APLP2Q06481 763 aa14.31□□□□□ -0.12
C1D-203ENST00000409302 ZNF219Q9P2Y4 722 aaPredicted RBP14.24□□□□□ -0.13
C1D-203ENST00000409302 EIF4G1Q04637 1599 aaKnown RBP14.24□□□□□ -0.13
C1D-203ENST00000409302 TRHP20396 242 aaPredicted RBP14.22□□□□□ -0.13
C1D-203ENST00000409302 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
C1D-203ENST00000409302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.18□□□□□ -0.14
C1D-203ENST00000409302 HNRNPUL2Q1KMD3 747 aaKnown RBP14.18□□□□□ -0.14
C1D-203ENST00000409302 ABCB7O75027 752 aa14.15□□□□□ -0.14
C1D-203ENST00000409302 ERCC6Q03468 1493 aa14.12□□□□□ -0.15
C1D-203ENST00000409302 ZCCHC6Q5VYS8 1495 aaKnown RBP14.1□□□□□ -0.15
C1D-203ENST00000409302 SHROOM4Q9ULL8 1493 aa14.07□□□□□ -0.16
C1D-203ENST00000409302 SAMD1Q6SPF0 538 aaPredicted RBP14.04□□□□□ -0.16
C1D-203ENST00000409302 MYO15BQ96JP2 1530 aa14.04□□□□□ -0.16
C1D-203ENST00000409302 DCAF1Q9Y4B6 1507 aa14.03□□□□□ -0.16
C1D-203ENST00000409302 RBM42Q9BTD8 480 aaKnown RBP14□□□□□ -0.17
C1D-203ENST00000409302 ILDR1Q86SU0 546 aaPredicted RBP13.93□□□□□ -0.18
C1D-203ENST00000409302 CHRDL2Q6WN34 429 aa13.81□□□□□ -0.2
C1D-203ENST00000409302 POLA2Q14181 598 aa13.74□□□□□ -0.21
C1D-203ENST00000409302 MYCNP04198 464 aaPredicted RBP13.73□□□□□ -0.21
C1D-203ENST00000409302 THOC2Q8NI27 1593 aaKnown RBP13.69□□□□□ -0.22
C1D-203ENST00000409302 SCRIBQ14160 1630 aa13.66□□□□□ -0.22
C1D-203ENST00000409302 NESP48681 1621 aa13.64□□□□□ -0.23
C1D-203ENST00000409302 OSCARQ8IYS5 282 aa13.61□□□□□ -0.23
C1D-203ENST00000409302 RIMBP3CA6NJZ7 1639 aa13.61□□□□□ -0.23
C1D-203ENST00000409302 RIMBP3BA6NNM3 1639 aa13.61□□□□□ -0.23
C1D-203ENST00000409302 RIMBP3Q9UFD9 1639 aa13.61□□□□□ -0.23
C1D-203ENST00000409302 BAZ1AQ9NRL2 1556 aaPredicted RBP13.58□□□□□ -0.24
C1D-203ENST00000409302 AKT1S1Q96B36 256 aa13.56□□□□□ -0.24
C1D-203ENST00000409302 SLC4A1APQ9BWU0 796 aaKnown RBP13.55□□□□□ -0.24
C1D-203ENST00000409302 SP7Q8TDD2 431 aaPredicted RBP13.53□□□□□ -0.24
C1D-203ENST00000409302 SMARCA2P51531 1590 aa13.53□□□□□ -0.24
C1D-203ENST00000409302 ZBTB12Q9Y330 459 aaPredicted RBP13.52□□□□□ -0.25
C1D-203ENST00000409302 ARHGEF11O15085 1522 aa13.44□□□□□ -0.26
C1D-203ENST00000409302 CYB5RLQ6IPT4 315 aa13.43□□□□□ -0.26
C1D-203ENST00000409302 REM2Q8IYK8 340 aaPredicted RBP13.39□□□□□ -0.27
C1D-203ENST00000409302 FOXD4L1Q9NU39 408 aa13.39□□□□□ -0.27
C1D-203ENST00000409302 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
C1D-203ENST00000409302 KIF21AQ7Z4S6 1674 aa13.35□□□□□ -0.27
C1D-203ENST00000409302 ATF5Q9Y2D1 282 aaPredicted RBP13.34□□□□□ -0.27
C1D-203ENST00000409302 NCAPD3P42695 1498 aa13.34□□□□□ -0.27
C1D-203ENST00000409302 HAX1O00165 279 aa13.27□□□□□ -0.29
C1D-203ENST00000409302 ARAP1Q96P48 1450 aa13.24□□□□□ -0.29
C1D-203ENST00000409302 PITPNM1O00562 1244 aa13.24□□□□□ -0.29
C1D-203ENST00000409302 FXR2P51116 673 aaKnown RBP eCLIP13.24□□□□□ -0.29
C1D-203ENST00000409302 LAMC3Q9Y6N6 1575 aa13.23□□□□□ -0.29
C1D-203ENST00000409302 PDS5BQ9NTI5 1447 aa13.22□□□□□ -0.29
C1D-203ENST00000409302 MRC2Q9UBG0 1479 aa13.21□□□□□ -0.3
C1D-203ENST00000409302 WDR62O43379 1518 aa13.19□□□□□ -0.3
C1D-203ENST00000409302 ZBTB22O15209 634 aa13.19□□□□□ -0.3
C1D-203ENST00000409302 ATAD2BQ9ULI0 1458 aa13.16□□□□□ -0.3
C1D-203ENST00000409302 HMGXB3Q12766 1538 aa13.12□□□□□ -0.31
C1D-203ENST00000409302 LMTK3Q96Q04 1460 aa13.11□□□□□ -0.31
C1D-203ENST00000409302 SOCS7O14512 581 aa13.05□□□□□ -0.32
C1D-203ENST00000409302 SMARCA4P51532 1647 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms