RNA–Protein interactions for RNA: ENST00000405876.8

TCHP-202, Transcript of trichoplein keratin filament binding, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TCHP, Length 3,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-202ENST00000405876 NISCHQ9Y2I1 1504 aa24.52■■□□□ 1.52
TCHP-202ENST00000405876 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
TCHP-202ENST00000405876 DCAF8L2P0C7V8 631 aa20.84■□□□□ 0.93
TCHP-202ENST00000405876 SUPT5HO00267 1087 aaKnown RBP20.72■□□□□ 0.91
TCHP-202ENST00000405876 ZCCHC6Q5VYS8 1495 aaKnown RBP20.68■□□□□ 0.9
TCHP-202ENST00000405876 CCDC180Q9P1Z9 1646 aa20.67■□□□□ 0.9
TCHP-202ENST00000405876 DCAF1Q9Y4B6 1507 aa19.93■□□□□ 0.78
TCHP-202ENST00000405876 CHIC1Q5VXU3 224 aa19.92■□□□□ 0.78
TCHP-202ENST00000405876 MYO15BQ96JP2 1530 aa19.79■□□□□ 0.76
TCHP-202ENST00000405876 ABCC9O60706 1549 aa19.72■□□□□ 0.75
TCHP-202ENST00000405876 SCRIBQ14160 1630 aa19.67■□□□□ 0.74
TCHP-202ENST00000405876 PCGF6Q9BYE7 350 aa19.55■□□□□ 0.72
TCHP-202ENST00000405876 LOC105371045A0A1W2PR82 267 aa19.48■□□□□ 0.71
TCHP-202ENST00000405876 RSF1Q96T23 1441 aaPredicted RBP19.45■□□□□ 0.7
TCHP-202ENST00000405876 HRCP23327 699 aa19.41■□□□□ 0.7
TCHP-202ENST00000405876 PPARGC1BQ86YN6 1023 aaKnown RBP19.33■□□□□ 0.69
TCHP-202ENST00000405876 CECR2Q9BXF3 1484 aa19.31■□□□□ 0.68
TCHP-202ENST00000405876 NACADO15069 1562 aa19.26■□□□□ 0.67
TCHP-202ENST00000405876 FAM9AQ8IZU1 332 aaPredicted RBP19.22■□□□□ 0.67
TCHP-202ENST00000405876 RB1CC1Q8TDY2 1594 aa19.2■□□□□ 0.66
TCHP-202ENST00000405876 EHMT2Q96KQ7 1210 aa19.2■□□□□ 0.66
TCHP-202ENST00000405876 TRIM41Q8WV44 630 aa19.18■□□□□ 0.66
TCHP-202ENST00000405876 MROH2BQ7Z745 1585 aa19.15■□□□□ 0.66
TCHP-202ENST00000405876 WIZO95785 1651 aa19■□□□□ 0.63
TCHP-202ENST00000405876 PABPN1Q86U42 306 aaKnown RBP eCLIP18.98■□□□□ 0.63
TCHP-202ENST00000405876 TRIM26Q12899 539 aaPredicted RBP18.84■□□□□ 0.61
TCHP-202ENST00000405876 BAZ1AQ9NRL2 1556 aaPredicted RBP18.8■□□□□ 0.6
TCHP-202ENST00000405876 UNC13AQ9UPW8 1703 aa18.69■□□□□ 0.58
TCHP-202ENST00000405876 SMARCA4P51532 1647 aa18.67■□□□□ 0.58
TCHP-202ENST00000405876 CCDC88BA6NC98 1476 aa18.65■□□□□ 0.58
TCHP-202ENST00000405876 ABCC8Q09428 1581 aa18.62■□□□□ 0.57
TCHP-202ENST00000405876 TOP2AP11388 1531 aaKnown RBP18.6■□□□□ 0.57
TCHP-202ENST00000405876 BICRAQ9NZM4 1560 aa18.57■□□□□ 0.56
TCHP-202ENST00000405876 SMARCA2P51531 1590 aa18.54■□□□□ 0.56
TCHP-202ENST00000405876 EIF4G1Q04637 1599 aaKnown RBP18.53■□□□□ 0.56
TCHP-202ENST00000405876 TTBK1Q5TCY1 1321 aaPredicted RBP18.5■□□□□ 0.55
TCHP-202ENST00000405876 SOGA1O94964 1423 aa18.46■□□□□ 0.55
TCHP-202ENST00000405876 RUSC2Q8N2Y8 1516 aa18.4■□□□□ 0.54
TCHP-202ENST00000405876 ZEB1P37275 1124 aaPredicted RBP18.36■□□□□ 0.53
TCHP-202ENST00000405876 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.35■□□□□ 0.53
TCHP-202ENST00000405876 UBTFP17480 764 aaKnown RBP18.35■□□□□ 0.53
TCHP-202ENST00000405876 CSRNP3Q8WYN3 585 aa18.32■□□□□ 0.52
TCHP-202ENST00000405876 ATAD2BQ9ULI0 1458 aa18.31■□□□□ 0.52
TCHP-202ENST00000405876 WRNQ14191 1432 aaPredicted RBP eCLIP18.27■□□□□ 0.51
TCHP-202ENST00000405876 BAZ1BQ9UIG0 1483 aaKnown RBP18.26■□□□□ 0.51
TCHP-202ENST00000405876 CEP162Q5TB80 1403 aa18.23■□□□□ 0.51
TCHP-202ENST00000405876 RANGAP1P46060 587 aaPredicted RBP18.23■□□□□ 0.51
TCHP-202ENST00000405876 CCER1Q8TC90 406 aaPredicted RBP18.22■□□□□ 0.51
TCHP-202ENST00000405876 PEG3Q9GZU2 1588 aa18.21■□□□□ 0.51
TCHP-202ENST00000405876 SYNJ1O43426 1573 aa18.15■□□□□ 0.5
TCHP-202ENST00000405876 TNIKQ9UKE5 1360 aa18.14■□□□□ 0.49
TCHP-202ENST00000405876 SCAF1Q9H7N4 1312 aaKnown RBP18.14■□□□□ 0.49
TCHP-202ENST00000405876 EEA1Q15075 1411 aa18.07■□□□□ 0.48
TCHP-202ENST00000405876 PELP1Q8IZL8 1130 aaKnown RBP18.07■□□□□ 0.48
TCHP-202ENST00000405876 GOLGA3Q08378 1498 aa18.05■□□□□ 0.48
TCHP-202ENST00000405876 RAPGEF2Q9Y4G8 1499 aa17.97■□□□□ 0.47
TCHP-202ENST00000405876 CEP164Q9UPV0 1460 aa17.95■□□□□ 0.46
TCHP-202ENST00000405876 CLIP1P30622 1438 aa17.93■□□□□ 0.46
TCHP-202ENST00000405876 NCAPD3P42695 1498 aa17.92■□□□□ 0.46
TCHP-202ENST00000405876 HNRNPUL2Q1KMD3 747 aaKnown RBP17.91■□□□□ 0.46
TCHP-202ENST00000405876 NEUROD1Q13562 356 aa17.9■□□□□ 0.46
TCHP-202ENST00000405876 DIEXFQ68CQ4 756 aaKnown RBP17.9■□□□□ 0.46
TCHP-202ENST00000405876 TOP2BQ02880 1626 aa17.83■□□□□ 0.45
TCHP-202ENST00000405876 APLP2Q06481 763 aa17.82■□□□□ 0.44
TCHP-202ENST00000405876 KIF21BO75037 1637 aa17.82■□□□□ 0.44
TCHP-202ENST00000405876 HMGXB3Q12766 1538 aa17.81■□□□□ 0.44
TCHP-202ENST00000405876 CUX1P39880 1505 aa17.8■□□□□ 0.44
TCHP-202ENST00000405876 ACIN1Q9UKV3 1341 aaKnown RBP17.79■□□□□ 0.44
TCHP-202ENST00000405876 YTHDC1Q96MU7 727 aaKnown RBP17.77■□□□□ 0.44
TCHP-202ENST00000405876 VPS8Q8N3P4 1428 aa17.77■□□□□ 0.43
TCHP-202ENST00000405876 CFTRP13569 1480 aa17.76■□□□□ 0.43
TCHP-202ENST00000405876 GTF3C3Q9Y5Q9 886 aa17.75■□□□□ 0.43
TCHP-202ENST00000405876 PRXQ9BXM0 1461 aa17.7■□□□□ 0.42
TCHP-202ENST00000405876 BIVM-ERCC5R4GMW8 1640 aa17.7■□□□□ 0.42
TCHP-202ENST00000405876 KANK4Q5T7N3 995 aaPredicted RBP17.69■□□□□ 0.42
TCHP-202ENST00000405876 KIF27Q86VH2 1401 aa17.69■□□□□ 0.42
TCHP-202ENST00000405876 CADPSQ9ULU8 1353 aa17.66■□□□□ 0.42
TCHP-202ENST00000405876 CENPBP07199 599 aaPredicted RBP17.63■□□□□ 0.41
TCHP-202ENST00000405876 ZNF316A6NFI3 1004 aaPredicted RBP17.62■□□□□ 0.41
TCHP-202ENST00000405876 CUX2O14529 1486 aa17.62■□□□□ 0.41
TCHP-202ENST00000405876 ARAP1Q96P48 1450 aa17.62■□□□□ 0.41
TCHP-202ENST00000405876 CC2D2AQ9P2K1 1620 aa17.58■□□□□ 0.41
TCHP-202ENST00000405876 DNAJC5BQ9UF47 199 aa17.58■□□□□ 0.4
TCHP-202ENST00000405876 IGF1RP08069 1367 aa17.58■□□□□ 0.4
TCHP-202ENST00000405876 P3H3Q8IVL6 736 aa17.56■□□□□ 0.4
TCHP-202ENST00000405876 ERICH3Q5RHP9 1530 aa17.56■□□□□ 0.4
TCHP-202ENST00000405876 ITGAEP38570 1179 aa17.56■□□□□ 0.4
TCHP-202ENST00000405876 MIER1Q8N108 512 aa17.54■□□□□ 0.4
TCHP-202ENST00000405876 FGD5Q6ZNL6 1462 aa17.54■□□□□ 0.4
TCHP-202ENST00000405876 NESP48681 1621 aa17.53■□□□□ 0.4
TCHP-202ENST00000405876 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
TCHP-202ENST00000405876 ARHGAP35Q9NRY4 1499 aa17.5■□□□□ 0.39
TCHP-202ENST00000405876 ATP1B4Q9UN42 357 aaPredicted RBP17.5■□□□□ 0.39
TCHP-202ENST00000405876 FANCD2Q9BXW9 1451 aa17.48■□□□□ 0.39
TCHP-202ENST00000405876 RAD54L2Q9Y4B4 1467 aa17.47■□□□□ 0.39
TCHP-202ENST00000405876 MYT1Q01538 1121 aa17.37■□□□□ 0.37
TCHP-202ENST00000405876 POLA1P09884 1462 aaPredicted RBP17.34■□□□□ 0.37
TCHP-202ENST00000405876 DHX57Q6P158 1386 aaKnown RBP17.33■□□□□ 0.37
TCHP-202ENST00000405876 TDRD9Q8NDG6 1382 aaKnown RBP17.33■□□□□ 0.36
TCHP-202ENST00000405876 CCNB3Q8WWL7 1395 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms