RNA–Protein interactions for RNA: ENST00000397337.6

NEB-202, Transcript of nebulin, humanhuman

TSL 5

Gene NEB, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-202ENST00000397337 AEBP2Q6ZN18 517 aaPredicted RBP13.19□□□□□ -0.3
NEB-202ENST00000397337 CHIC1Q5VXU3 224 aa13.02□□□□□ -0.33
NEB-202ENST00000397337 NISCHQ9Y2I1 1504 aa12.22□□□□□ -0.45
NEB-202ENST00000397337 PHF23Q9BUL5 403 aaPredicted RBP11.64□□□□□ -0.55
NEB-202ENST00000397337 SENP3Q9H4L4 574 aaPredicted RBP10.89□□□□□ -0.67
NEB-202ENST00000397337 PLPPR3Q6T4P5 718 aa10.64□□□□□ -0.71
NEB-202ENST00000397337 CCDC180Q9P1Z9 1646 aa10.54□□□□□ -0.72
NEB-202ENST00000397337 DCAF8L2P0C7V8 631 aa10.52□□□□□ -0.73
NEB-202ENST00000397337 ABCC9O60706 1549 aa10.39□□□□□ -0.75
NEB-202ENST00000397337 SHROOM4Q9ULL8 1493 aa10.33□□□□□ -0.76
NEB-202ENST00000397337 FOXD1Q16676 465 aa10.25□□□□□ -0.77
NEB-202ENST00000397337 ZCCHC6Q5VYS8 1495 aaKnown RBP10.23□□□□□ -0.77
NEB-202ENST00000397337 ADRA2BP18089 450 aa10.22□□□□□ -0.77
NEB-202ENST00000397337 PPP6R1Q9UPN7 881 aa10.21□□□□□ -0.77
NEB-202ENST00000397337 SCRIBQ14160 1630 aa9.98□□□□□ -0.81
NEB-202ENST00000397337 DCAF1Q9Y4B6 1507 aa9.9□□□□□ -0.82
NEB-202ENST00000397337 PABPN1Q86U42 306 aaKnown RBP eCLIP9.89□□□□□ -0.83
NEB-202ENST00000397337 SUPT5HO00267 1087 aaKnown RBP9.86□□□□□ -0.83
NEB-202ENST00000397337 NACADO15069 1562 aa9.86□□□□□ -0.83
NEB-202ENST00000397337 RB1CC1Q8TDY2 1594 aa9.84□□□□□ -0.83
NEB-202ENST00000397337 UNC13AQ9UPW8 1703 aa9.8□□□□□ -0.84
NEB-202ENST00000397337 MYO15BQ96JP2 1530 aa9.76□□□□□ -0.85
NEB-202ENST00000397337 KCNA4P22459 653 aa9.73□□□□□ -0.85
NEB-202ENST00000397337 CECR2Q9BXF3 1484 aa9.69□□□□□ -0.86
NEB-202ENST00000397337 PIAS4Q8N2W9 510 aaPredicted RBP9.68□□□□□ -0.86
NEB-202ENST00000397337 BICRAQ9NZM4 1560 aa9.66□□□□□ -0.86
NEB-202ENST00000397337 MROH2BQ7Z745 1585 aa9.56□□□□□ -0.88
NEB-202ENST00000397337 RSF1Q96T23 1441 aaPredicted RBP9.53□□□□□ -0.88
NEB-202ENST00000397337 WIZO95785 1651 aa9.51□□□□□ -0.89
NEB-202ENST00000397337 PPP4R3CPQ6ZMV5 832 aa9.5□□□□□ -0.89
NEB-202ENST00000397337 EHMT2Q96KQ7 1210 aa9.44□□□□□ -0.9
NEB-202ENST00000397337 SMARCA4P51532 1647 aa9.43□□□□□ -0.9
NEB-202ENST00000397337 DNAJC5BQ9UF47 199 aa9.4□□□□□ -0.9
NEB-202ENST00000397337 BAZ1AQ9NRL2 1556 aaPredicted RBP9.4□□□□□ -0.91
NEB-202ENST00000397337 EIF4G1Q04637 1599 aaKnown RBP9.37□□□□□ -0.91
NEB-202ENST00000397337 ATAD2BQ9ULI0 1458 aa9.3□□□□□ -0.92
NEB-202ENST00000397337 CC2D2AQ9P2K1 1620 aa9.29□□□□□ -0.92
NEB-202ENST00000397337 BAZ1BQ9UIG0 1483 aaKnown RBP9.26□□□□□ -0.93
NEB-202ENST00000397337 CCDC88BA6NC98 1476 aa9.25□□□□□ -0.93
NEB-202ENST00000397337 NPM3O75607 178 aaKnown RBP9.24□□□□□ -0.93
NEB-202ENST00000397337 TOP2AP11388 1531 aaKnown RBP9.24□□□□□ -0.93
NEB-202ENST00000397337 SMARCA2P51531 1590 aa9.22□□□□□ -0.93
NEB-202ENST00000397337 SLC4A1APQ9BWU0 796 aaKnown RBP9.21□□□□□ -0.93
NEB-202ENST00000397337 MAPK8IP2Q13387 824 aaPredicted RBP9.2□□□□□ -0.94
NEB-202ENST00000397337 PEG3Q9GZU2 1588 aa9.18□□□□□ -0.94
NEB-202ENST00000397337 FAM9AQ8IZU1 332 aaPredicted RBP9.17□□□□□ -0.94
NEB-202ENST00000397337 NCBP3Q53F19 620 aaKnown RBP9.17□□□□□ -0.94
NEB-202ENST00000397337 CSRNP3Q8WYN3 585 aa9.17□□□□□ -0.94
NEB-202ENST00000397337 ABCC8Q09428 1581 aa9.16□□□□□ -0.94
NEB-202ENST00000397337 MSH5O43196 834 aa9.15□□□□□ -0.94
NEB-202ENST00000397337 NCAPD3P42695 1498 aa9.15□□□□□ -0.94
NEB-202ENST00000397337 NESP48681 1621 aa9.13□□□□□ -0.95
NEB-202ENST00000397337 TRIM41Q8WV44 630 aa9.12□□□□□ -0.95
NEB-202ENST00000397337 HMGXB3Q12766 1538 aa9.09□□□□□ -0.95
NEB-202ENST00000397337 CNKSR2Q8WXI2 1034 aa9.08□□□□□ -0.96
NEB-202ENST00000397337 LOC105371045A0A1W2PR82 267 aa9.07□□□□□ -0.96
NEB-202ENST00000397337 ZBTB22O15209 634 aa9.03□□□□□ -0.96
NEB-202ENST00000397337 SCAF1Q9H7N4 1312 aaKnown RBP9.01□□□□□ -0.97
NEB-202ENST00000397337 SYNJ1O43426 1573 aa8.98□□□□□ -0.97
NEB-202ENST00000397337 CADPSQ9ULU8 1353 aa8.98□□□□□ -0.97
NEB-202ENST00000397337 RUSC2Q8N2Y8 1516 aa8.98□□□□□ -0.97
NEB-202ENST00000397337 CFTRP13569 1480 aa8.97□□□□□ -0.97
NEB-202ENST00000397337 SOGA1O94964 1423 aa8.96□□□□□ -0.98
NEB-202ENST00000397337 WRNQ14191 1432 aaPredicted RBP eCLIP8.96□□□□□ -0.98
NEB-202ENST00000397337 FANCD2Q9BXW9 1451 aa8.92□□□□□ -0.98
NEB-202ENST00000397337 RANGAP1P46060 587 aaPredicted RBP8.92□□□□□ -0.98
NEB-202ENST00000397337 KIF21AQ7Z4S6 1674 aa8.92□□□□□ -0.98
NEB-202ENST00000397337 CUX1P39880 1505 aa8.91□□□□□ -0.98
NEB-202ENST00000397337 RAD54L2Q9Y4B4 1467 aa8.86□□□□□ -0.99
NEB-202ENST00000397337 PRDM2Q13029 1718 aa8.85□□□□□ -0.99
NEB-202ENST00000397337 URB2Q14146 1524 aaKnown RBP8.84□□□□□ -0.99
NEB-202ENST00000397337 CEP164Q9UPV0 1460 aa8.84□□□□□ -0.99
NEB-202ENST00000397337 LAMC3Q9Y6N6 1575 aa8.84□□□□□ -0.99
NEB-202ENST00000397337 ERCC6Q03468 1493 aa8.84□□□□□ -1
NEB-202ENST00000397337 FGD5Q6ZNL6 1462 aa8.83□□□□□ -1
NEB-202ENST00000397337 TOP2BQ02880 1626 aa8.83□□□□□ -1
NEB-202ENST00000397337 RNF216Q9NWF9 866 aaPredicted RBP8.82□□□□□ -1
NEB-202ENST00000397337 TOPBP1Q92547 1522 aa8.81□□□□□ -1
NEB-202ENST00000397337 PDS5BQ9NTI5 1447 aa8.81□□□□□ -1
NEB-202ENST00000397337 PPARGC1BQ86YN6 1023 aaKnown RBP8.8□□□□□ -1
NEB-202ENST00000397337 TDRD9Q8NDG6 1382 aaKnown RBP8.8□□□□□ -1
NEB-202ENST00000397337 DMRT2Q9Y5R5 561 aa8.8□□□□□ -1
NEB-202ENST00000397337 BIVM-ERCC5R4GMW8 1640 aa8.79□□□□□ -1
NEB-202ENST00000397337 UBTFP17480 764 aaKnown RBP8.79□□□□□ -1
NEB-202ENST00000397337 POLA1P09884 1462 aaPredicted RBP8.79□□□□□ -1
NEB-202ENST00000397337 CUX2O14529 1486 aa8.78□□□□□ -1
NEB-202ENST00000397337 TTBK1Q5TCY1 1321 aaPredicted RBP8.77□□□□□ -1.01
NEB-202ENST00000397337 DNMBPQ6XZF7 1577 aa8.75□□□□□ -1.01
NEB-202ENST00000397337 AQRO60306 1485 aaKnown RBP eCLIP8.74□□□□□ -1.01
NEB-202ENST00000397337 ZNF608Q9ULD9 1512 aaPredicted RBP8.74□□□□□ -1.01
NEB-202ENST00000397337 RAPGEF2Q9Y4G8 1499 aa8.74□□□□□ -1.01
NEB-202ENST00000397337 HOXD11P31277 338 aaPredicted RBP8.73□□□□□ -1.01
NEB-202ENST00000397337 FOXD4L1Q9NU39 408 aa8.72□□□□□ -1.01
NEB-202ENST00000397337 MRC2Q9UBG0 1479 aa8.72□□□□□ -1.01
NEB-202ENST00000397337 SLC4A2P04920 1241 aa8.7□□□□□ -1.02
NEB-202ENST00000397337 THOC2Q8NI27 1593 aaKnown RBP8.69□□□□□ -1.02
NEB-202ENST00000397337 FBLN2P98095 1184 aa8.69□□□□□ -1.02
NEB-202ENST00000397337 KIF27Q86VH2 1401 aa8.69□□□□□ -1.02
NEB-202ENST00000397337 IGF1RP08069 1367 aa8.68□□□□□ -1.02
NEB-202ENST00000397337 P3H3Q8IVL6 736 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms