RNA–Protein interactions for RNA: ENST00000397023.5

PPARG-208, Transcript of peroxisome proliferator activated receptor gamma, humanhuman

TSL 5

Gene PPARG, Length 2,002 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARG-208ENST00000397023 NISCHQ9Y2I1 1504 aa19.04■□□□□ 0.64
PPARG-208ENST00000397023 AEBP2Q6ZN18 517 aaPredicted RBP17.14■□□□□ 0.34
PPARG-208ENST00000397023 CHIC1Q5VXU3 224 aa16.82■□□□□ 0.28
PPARG-208ENST00000397023 CCDC180Q9P1Z9 1646 aa16.3■□□□□ 0.2
PPARG-208ENST00000397023 ZCCHC6Q5VYS8 1495 aaKnown RBP16.17■□□□□ 0.18
PPARG-208ENST00000397023 SHROOM4Q9ULL8 1493 aa16.16■□□□□ 0.18
PPARG-208ENST00000397023 HRCP23327 699 aa16.1■□□□□ 0.17
PPARG-208ENST00000397023 SUPT5HO00267 1087 aaKnown RBP16.05■□□□□ 0.16
PPARG-208ENST00000397023 MYO15BQ96JP2 1530 aa15.88■□□□□ 0.13
PPARG-208ENST00000397023 DCAF1Q9Y4B6 1507 aa15.83■□□□□ 0.12
PPARG-208ENST00000397023 PCGF6Q9BYE7 350 aa15.7■□□□□ 0.1
PPARG-208ENST00000397023 DCAF8L2P0C7V8 631 aa15.58■□□□□ 0.08
PPARG-208ENST00000397023 PELP1Q8IZL8 1130 aaKnown RBP15.5■□□□□ 0.07
PPARG-208ENST00000397023 TRIM26Q12899 539 aaPredicted RBP15.49■□□□□ 0.07
PPARG-208ENST00000397023 ZEB1P37275 1124 aaPredicted RBP15.47■□□□□ 0.07
PPARG-208ENST00000397023 PPARGC1BQ86YN6 1023 aaKnown RBP15.44■□□□□ 0.06
PPARG-208ENST00000397023 ABCC9O60706 1549 aa15.36■□□□□ 0.05
PPARG-208ENST00000397023 LOC105371045A0A1W2PR82 267 aa15.28■□□□□ 0.04
PPARG-208ENST00000397023 SCRIBQ14160 1630 aa15.13■□□□□ 0.01
PPARG-208ENST00000397023 RB1CC1Q8TDY2 1594 aa15.12■□□□□ 0.01
PPARG-208ENST00000397023 RSF1Q96T23 1441 aaPredicted RBP15.1■□□□□ 0.01
PPARG-208ENST00000397023 NACADO15069 1562 aa15.07■□□□□ 0
PPARG-208ENST00000397023 TRIM41Q8WV44 630 aa15.05■□□□□ -0
PPARG-208ENST00000397023 PHF23Q9BUL5 403 aaPredicted RBP14.97□□□□□ -0.01
PPARG-208ENST00000397023 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
PPARG-208ENST00000397023 MYT1Q01538 1121 aa14.95□□□□□ -0.02
PPARG-208ENST00000397023 ACIN1Q9UKV3 1341 aaKnown RBP14.81□□□□□ -0.04
PPARG-208ENST00000397023 CECR2Q9BXF3 1484 aa14.8□□□□□ -0.04
PPARG-208ENST00000397023 CENPBP07199 599 aaPredicted RBP14.78□□□□□ -0.04
PPARG-208ENST00000397023 MROH2BQ7Z745 1585 aa14.77□□□□□ -0.05
PPARG-208ENST00000397023 FAM9AQ8IZU1 332 aaPredicted RBP14.76□□□□□ -0.05
PPARG-208ENST00000397023 BAZ1AQ9NRL2 1556 aaPredicted RBP14.74□□□□□ -0.05
PPARG-208ENST00000397023 WRNQ14191 1432 aaPredicted RBP eCLIP14.73□□□□□ -0.05
PPARG-208ENST00000397023 EIF4G1Q04637 1599 aaKnown RBP14.72□□□□□ -0.05
PPARG-208ENST00000397023 CCER1Q8TC90 406 aaPredicted RBP14.71□□□□□ -0.05
PPARG-208ENST00000397023 WIZO95785 1651 aa14.68□□□□□ -0.06
PPARG-208ENST00000397023 DIEXFQ68CQ4 756 aaKnown RBP14.65□□□□□ -0.06
PPARG-208ENST00000397023 NEUROD1Q13562 356 aa14.63□□□□□ -0.07
PPARG-208ENST00000397023 UNC13AQ9UPW8 1703 aa14.61□□□□□ -0.07
PPARG-208ENST00000397023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.61□□□□□ -0.07
PPARG-208ENST00000397023 EEA1Q15075 1411 aa14.59□□□□□ -0.07
PPARG-208ENST00000397023 GTF3C3Q9Y5Q9 886 aa14.57□□□□□ -0.08
PPARG-208ENST00000397023 TOP2AP11388 1531 aaKnown RBP14.54□□□□□ -0.08
PPARG-208ENST00000397023 TNIKQ9UKE5 1360 aa14.54□□□□□ -0.08
PPARG-208ENST00000397023 CEP162Q5TB80 1403 aa14.53□□□□□ -0.08
PPARG-208ENST00000397023 SMARCA4P51532 1647 aa14.52□□□□□ -0.08
PPARG-208ENST00000397023 EHMT2Q96KQ7 1210 aa14.49□□□□□ -0.09
PPARG-208ENST00000397023 ZNF316A6NFI3 1004 aaPredicted RBP14.48□□□□□ -0.09
PPARG-208ENST00000397023 BICRAQ9NZM4 1560 aa14.43□□□□□ -0.1
PPARG-208ENST00000397023 CCDC88BA6NC98 1476 aa14.42□□□□□ -0.1
PPARG-208ENST00000397023 SMARCA2P51531 1590 aa14.41□□□□□ -0.1
PPARG-208ENST00000397023 GOLGA3Q08378 1498 aa14.41□□□□□ -0.1
PPARG-208ENST00000397023 ABCC8Q09428 1581 aa14.4□□□□□ -0.1
PPARG-208ENST00000397023 CLSPNQ9HAW4 1339 aa14.39□□□□□ -0.11
PPARG-208ENST00000397023 CSRNP3Q8WYN3 585 aa14.34□□□□□ -0.11
PPARG-208ENST00000397023 KIF21BO75037 1637 aa14.34□□□□□ -0.11
PPARG-208ENST00000397023 SOGA1O94964 1423 aa14.31□□□□□ -0.12
PPARG-208ENST00000397023 PEG3Q9GZU2 1588 aa14.31□□□□□ -0.12
PPARG-208ENST00000397023 CEP164Q9UPV0 1460 aa14.3□□□□□ -0.12
PPARG-208ENST00000397023 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
PPARG-208ENST00000397023 SENP3Q9H4L4 574 aaPredicted RBP14.29□□□□□ -0.12
PPARG-208ENST00000397023 BAZ1BQ9UIG0 1483 aaKnown RBP14.27□□□□□ -0.12
PPARG-208ENST00000397023 UBTFP17480 764 aaKnown RBP14.26□□□□□ -0.13
PPARG-208ENST00000397023 VPS8Q8N3P4 1428 aa14.22□□□□□ -0.13
PPARG-208ENST00000397023 MIER1Q8N108 512 aa14.2□□□□□ -0.14
PPARG-208ENST00000397023 CLIP1P30622 1438 aa14.19□□□□□ -0.14
PPARG-208ENST00000397023 YTHDC1Q96MU7 727 aaKnown RBP14.18□□□□□ -0.14
PPARG-208ENST00000397023 TTBK1Q5TCY1 1321 aaPredicted RBP14.18□□□□□ -0.14
PPARG-208ENST00000397023 RUSC2Q8N2Y8 1516 aa14.18□□□□□ -0.14
PPARG-208ENST00000397023 ATAD2BQ9ULI0 1458 aa14.16□□□□□ -0.14
PPARG-208ENST00000397023 APLP2Q06481 763 aa14.14□□□□□ -0.15
PPARG-208ENST00000397023 SYNJ1O43426 1573 aa14.1□□□□□ -0.15
PPARG-208ENST00000397023 HNRNPUL2Q1KMD3 747 aaKnown RBP14.09□□□□□ -0.15
PPARG-208ENST00000397023 ERICH3Q5RHP9 1530 aa14.06□□□□□ -0.16
PPARG-208ENST00000397023 DHX57Q6P158 1386 aaKnown RBP14.01□□□□□ -0.17
PPARG-208ENST00000397023 CUX2O14529 1486 aa14□□□□□ -0.17
PPARG-208ENST00000397023 RAPGEF2Q9Y4G8 1499 aa14□□□□□ -0.17
PPARG-208ENST00000397023 TOP2BQ02880 1626 aa14□□□□□ -0.17
PPARG-208ENST00000397023 SUPT16HQ9Y5B9 1047 aaKnown RBP13.98□□□□□ -0.17
PPARG-208ENST00000397023 BIVM-ERCC5R4GMW8 1640 aa13.97□□□□□ -0.17
PPARG-208ENST00000397023 RRBP1Q9P2E9 1410 aaKnown RBP13.97□□□□□ -0.17
PPARG-208ENST00000397023 HMGXB3Q12766 1538 aa13.93□□□□□ -0.18
PPARG-208ENST00000397023 NCAPD3P42695 1498 aa13.93□□□□□ -0.18
PPARG-208ENST00000397023 PRXQ9BXM0 1461 aa13.91□□□□□ -0.18
PPARG-208ENST00000397023 ARAP1Q96P48 1450 aa13.91□□□□□ -0.18
PPARG-208ENST00000397023 ANP32EQ9BTT0 268 aa13.86□□□□□ -0.19
PPARG-208ENST00000397023 TSHZ2Q9NRE2 1034 aa13.84□□□□□ -0.19
PPARG-208ENST00000397023 MAP3K1Q13233 1512 aa13.83□□□□□ -0.19
PPARG-208ENST00000397023 CCNB3Q8WWL7 1395 aa13.83□□□□□ -0.2
PPARG-208ENST00000397023 CFTRP13569 1480 aa13.78□□□□□ -0.2
PPARG-208ENST00000397023 KIF27Q86VH2 1401 aa13.78□□□□□ -0.2
PPARG-208ENST00000397023 TIMELESSQ9UNS1 1208 aa13.76□□□□□ -0.21
PPARG-208ENST00000397023 CUX1P39880 1505 aa13.76□□□□□ -0.21
PPARG-208ENST00000397023 MAPKBP1O60336 1514 aa13.74□□□□□ -0.21
PPARG-208ENST00000397023 KANK4Q5T7N3 995 aaPredicted RBP13.73□□□□□ -0.21
PPARG-208ENST00000397023 ARHGAP35Q9NRY4 1499 aa13.72□□□□□ -0.21
PPARG-208ENST00000397023 PLPPR3Q6T4P5 718 aa13.72□□□□□ -0.21
PPARG-208ENST00000397023 TIAM1Q13009 1591 aa13.72□□□□□ -0.21
PPARG-208ENST00000397023 PRDM2Q13029 1718 aa13.71□□□□□ -0.21
PPARG-208ENST00000397023 RAB3GAP2Q9H2M9 1393 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms