RNA–Protein interactions for RNA: ENST00000396099.5

LPIN1-204, Transcript of lipin 1, humanhuman

TSL 5

Gene LPIN1, Length 3,228 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPIN1-204ENST00000396099 NISCHQ9Y2I1 1504 aa24.83■■□□□ 1.56
LPIN1-204ENST00000396099 SHROOM4Q9ULL8 1493 aa21.32■■□□□ 1
LPIN1-204ENST00000396099 CCDC180Q9P1Z9 1646 aa20.99■□□□□ 0.95
LPIN1-204ENST00000396099 ZCCHC6Q5VYS8 1495 aaKnown RBP20.97■□□□□ 0.95
LPIN1-204ENST00000396099 SUPT5HO00267 1087 aaKnown RBP20.9■□□□□ 0.94
LPIN1-204ENST00000396099 DCAF8L2P0C7V8 631 aa20.84■□□□□ 0.93
LPIN1-204ENST00000396099 DCAF1Q9Y4B6 1507 aa20.28■□□□□ 0.84
LPIN1-204ENST00000396099 CHIC1Q5VXU3 224 aa20.23■□□□□ 0.83
LPIN1-204ENST00000396099 MYO15BQ96JP2 1530 aa20.11■□□□□ 0.81
LPIN1-204ENST00000396099 SCRIBQ14160 1630 aa19.83■□□□□ 0.76
LPIN1-204ENST00000396099 ABCC9O60706 1549 aa19.74■□□□□ 0.75
LPIN1-204ENST00000396099 LOC105371045A0A1W2PR82 267 aa19.71■□□□□ 0.75
LPIN1-204ENST00000396099 RSF1Q96T23 1441 aaPredicted RBP19.69■□□□□ 0.74
LPIN1-204ENST00000396099 PCGF6Q9BYE7 350 aa19.61■□□□□ 0.73
LPIN1-204ENST00000396099 NACADO15069 1562 aa19.49■□□□□ 0.71
LPIN1-204ENST00000396099 HRCP23327 699 aa19.49■□□□□ 0.71
LPIN1-204ENST00000396099 CECR2Q9BXF3 1484 aa19.46■□□□□ 0.71
LPIN1-204ENST00000396099 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
LPIN1-204ENST00000396099 TRIM41Q8WV44 630 aa19.42■□□□□ 0.7
LPIN1-204ENST00000396099 FAM9AQ8IZU1 332 aaPredicted RBP19.34■□□□□ 0.69
LPIN1-204ENST00000396099 MROH2BQ7Z745 1585 aa19.34■□□□□ 0.69
LPIN1-204ENST00000396099 EHMT2Q96KQ7 1210 aa19.25■□□□□ 0.67
LPIN1-204ENST00000396099 WIZO95785 1651 aa19.21■□□□□ 0.67
LPIN1-204ENST00000396099 PPARGC1BQ86YN6 1023 aaKnown RBP19.21■□□□□ 0.67
LPIN1-204ENST00000396099 TRIM26Q12899 539 aaPredicted RBP19.16■□□□□ 0.66
LPIN1-204ENST00000396099 BAZ1AQ9NRL2 1556 aaPredicted RBP19.04■□□□□ 0.64
LPIN1-204ENST00000396099 PABPN1Q86U42 306 aaKnown RBP eCLIP18.94■□□□□ 0.62
LPIN1-204ENST00000396099 SMARCA4P51532 1647 aa18.88■□□□□ 0.61
LPIN1-204ENST00000396099 UNC13AQ9UPW8 1703 aa18.87■□□□□ 0.61
LPIN1-204ENST00000396099 CCDC88BA6NC98 1476 aa18.86■□□□□ 0.61
LPIN1-204ENST00000396099 TOP2AP11388 1531 aaKnown RBP18.86■□□□□ 0.61
LPIN1-204ENST00000396099 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
LPIN1-204ENST00000396099 ABCC8Q09428 1581 aa18.81■□□□□ 0.6
LPIN1-204ENST00000396099 SMARCA2P51531 1590 aa18.77■□□□□ 0.6
LPIN1-204ENST00000396099 BICRAQ9NZM4 1560 aa18.71■□□□□ 0.59
LPIN1-204ENST00000396099 SOGA1O94964 1423 aa18.67■□□□□ 0.58
LPIN1-204ENST00000396099 ZEB1P37275 1124 aaPredicted RBP18.64■□□□□ 0.58
LPIN1-204ENST00000396099 TTBK1Q5TCY1 1321 aaPredicted RBP18.59■□□□□ 0.57
LPIN1-204ENST00000396099 RUSC2Q8N2Y8 1516 aa18.58■□□□□ 0.56
LPIN1-204ENST00000396099 CSRNP3Q8WYN3 585 aa18.55■□□□□ 0.56
LPIN1-204ENST00000396099 UBTFP17480 764 aaKnown RBP18.53■□□□□ 0.56
LPIN1-204ENST00000396099 CEP162Q5TB80 1403 aa18.51■□□□□ 0.55
LPIN1-204ENST00000396099 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.49■□□□□ 0.55
LPIN1-204ENST00000396099 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
LPIN1-204ENST00000396099 PEG3Q9GZU2 1588 aa18.48■□□□□ 0.55
LPIN1-204ENST00000396099 ATAD2BQ9ULI0 1458 aa18.47■□□□□ 0.55
LPIN1-204ENST00000396099 TNIKQ9UKE5 1360 aa18.46■□□□□ 0.55
LPIN1-204ENST00000396099 EEA1Q15075 1411 aa18.42■□□□□ 0.54
LPIN1-204ENST00000396099 BAZ1BQ9UIG0 1483 aaKnown RBP18.42■□□□□ 0.54
LPIN1-204ENST00000396099 CCER1Q8TC90 406 aaPredicted RBP18.4■□□□□ 0.54
LPIN1-204ENST00000396099 SYNJ1O43426 1573 aa18.36■□□□□ 0.53
LPIN1-204ENST00000396099 GOLGA3Q08378 1498 aa18.34■□□□□ 0.53
LPIN1-204ENST00000396099 PELP1Q8IZL8 1130 aaKnown RBP18.33■□□□□ 0.52
LPIN1-204ENST00000396099 RANGAP1P46060 587 aaPredicted RBP18.27■□□□□ 0.51
LPIN1-204ENST00000396099 CEP164Q9UPV0 1460 aa18.24■□□□□ 0.51
LPIN1-204ENST00000396099 CLIP1P30622 1438 aa18.18■□□□□ 0.5
LPIN1-204ENST00000396099 RAPGEF2Q9Y4G8 1499 aa18.18■□□□□ 0.5
LPIN1-204ENST00000396099 MYT1Q01538 1121 aa18.17■□□□□ 0.5
LPIN1-204ENST00000396099 KIF21BO75037 1637 aa18.15■□□□□ 0.5
LPIN1-204ENST00000396099 HNRNPUL2Q1KMD3 747 aaKnown RBP18.11■□□□□ 0.49
LPIN1-204ENST00000396099 NCAPD3P42695 1498 aa18.1■□□□□ 0.49
LPIN1-204ENST00000396099 TOP2BQ02880 1626 aa18.09■□□□□ 0.49
LPIN1-204ENST00000396099 VPS8Q8N3P4 1428 aa18.07■□□□□ 0.48
LPIN1-204ENST00000396099 APLP2Q06481 763 aa18.06■□□□□ 0.48
LPIN1-204ENST00000396099 HMGXB3Q12766 1538 aa18.02■□□□□ 0.48
LPIN1-204ENST00000396099 CUX1P39880 1505 aa17.99■□□□□ 0.47
LPIN1-204ENST00000396099 DIEXFQ68CQ4 756 aaKnown RBP17.99■□□□□ 0.47
LPIN1-204ENST00000396099 BIVM-ERCC5R4GMW8 1640 aa17.99■□□□□ 0.47
LPIN1-204ENST00000396099 PRXQ9BXM0 1461 aa17.96■□□□□ 0.47
LPIN1-204ENST00000396099 SCAF1Q9H7N4 1312 aaKnown RBP17.95■□□□□ 0.46
LPIN1-204ENST00000396099 CFTRP13569 1480 aa17.95■□□□□ 0.46
LPIN1-204ENST00000396099 KIF27Q86VH2 1401 aa17.91■□□□□ 0.46
LPIN1-204ENST00000396099 KANK4Q5T7N3 995 aaPredicted RBP17.88■□□□□ 0.45
LPIN1-204ENST00000396099 ERICH3Q5RHP9 1530 aa17.88■□□□□ 0.45
LPIN1-204ENST00000396099 ARAP1Q96P48 1450 aa17.87■□□□□ 0.45
LPIN1-204ENST00000396099 ZNF316A6NFI3 1004 aaPredicted RBP17.85■□□□□ 0.45
LPIN1-204ENST00000396099 NEUROD1Q13562 356 aa17.81■□□□□ 0.44
LPIN1-204ENST00000396099 CADPSQ9ULU8 1353 aa17.79■□□□□ 0.44
LPIN1-204ENST00000396099 CUX2O14529 1486 aa17.78■□□□□ 0.44
LPIN1-204ENST00000396099 ACIN1Q9UKV3 1341 aaKnown RBP17.77■□□□□ 0.44
LPIN1-204ENST00000396099 IGF1RP08069 1367 aa17.77■□□□□ 0.43
LPIN1-204ENST00000396099 SLC24A1O60721 1099 aa17.76■□□□□ 0.43
LPIN1-204ENST00000396099 ARHGAP35Q9NRY4 1499 aa17.74■□□□□ 0.43
LPIN1-204ENST00000396099 FGD5Q6ZNL6 1462 aa17.69■□□□□ 0.42
LPIN1-204ENST00000396099 ITGAEP38570 1179 aa17.68■□□□□ 0.42
LPIN1-204ENST00000396099 CARMIL1Q5VZK9 1371 aa17.68■□□□□ 0.42
LPIN1-204ENST00000396099 CC2D2AQ9P2K1 1620 aa17.67■□□□□ 0.42
LPIN1-204ENST00000396099 CENPBP07199 599 aaPredicted RBP17.65■□□□□ 0.42
LPIN1-204ENST00000396099 DHX57Q6P158 1386 aaKnown RBP17.65■□□□□ 0.42
LPIN1-204ENST00000396099 DNAJC5BQ9UF47 199 aa17.64■□□□□ 0.42
LPIN1-204ENST00000396099 MIER1Q8N108 512 aa17.64■□□□□ 0.41
LPIN1-204ENST00000396099 YTHDC1Q96MU7 727 aaKnown RBP17.64■□□□□ 0.41
LPIN1-204ENST00000396099 P3H3Q8IVL6 736 aa17.63■□□□□ 0.41
LPIN1-204ENST00000396099 PRKCSHP14314 528 aaPredicted RBP17.63■□□□□ 0.41
LPIN1-204ENST00000396099 RRBP1Q9P2E9 1410 aaKnown RBP17.62■□□□□ 0.41
LPIN1-204ENST00000396099 FANCD2Q9BXW9 1451 aa17.61■□□□□ 0.41
LPIN1-204ENST00000396099 PRDM2Q13029 1718 aa17.61■□□□□ 0.41
LPIN1-204ENST00000396099 GTF3C3Q9Y5Q9 886 aa17.61■□□□□ 0.41
LPIN1-204ENST00000396099 CCNB3Q8WWL7 1395 aa17.6■□□□□ 0.41
LPIN1-204ENST00000396099 RAD54L2Q9Y4B4 1467 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms