RNA–Protein interactions for RNA: ENST00000394318.7

PLXDC1-202, Transcript of plexin domain containing 1, humanhuman

TSL 1 (best)

Gene PLXDC1, Length 2,659 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXDC1-202ENST00000394318 NISCHQ9Y2I1 1504 aa32.63■■■□□ 2.81
PLXDC1-202ENST00000394318 SHROOM4Q9ULL8 1493 aa28■■■□□ 2.07
PLXDC1-202ENST00000394318 CCDC180Q9P1Z9 1646 aa27.68■■■□□ 2.02
PLXDC1-202ENST00000394318 ZCCHC6Q5VYS8 1495 aaKnown RBP27.6■■■□□ 2.01
PLXDC1-202ENST00000394318 SUPT5HO00267 1087 aaKnown RBP27.49■■□□□ 1.99
PLXDC1-202ENST00000394318 DCAF8L2P0C7V8 631 aa27.2■■□□□ 1.95
PLXDC1-202ENST00000394318 DCAF1Q9Y4B6 1507 aa26.71■■□□□ 1.87
PLXDC1-202ENST00000394318 CHIC1Q5VXU3 224 aa26.69■■□□□ 1.86
PLXDC1-202ENST00000394318 MYO15BQ96JP2 1530 aa26.62■■□□□ 1.85
PLXDC1-202ENST00000394318 ABCC9O60706 1549 aa26.07■■□□□ 1.76
PLXDC1-202ENST00000394318 SCRIBQ14160 1630 aa26.05■■□□□ 1.76
PLXDC1-202ENST00000394318 PCGF6Q9BYE7 350 aa26■■□□□ 1.75
PLXDC1-202ENST00000394318 HRCP23327 699 aa25.99■■□□□ 1.75
PLXDC1-202ENST00000394318 LOC105371045A0A1W2PR82 267 aa25.96■■□□□ 1.75
PLXDC1-202ENST00000394318 RSF1Q96T23 1441 aaPredicted RBP25.87■■□□□ 1.73
PLXDC1-202ENST00000394318 RB1CC1Q8TDY2 1594 aa25.63■■□□□ 1.69
PLXDC1-202ENST00000394318 NACADO15069 1562 aa25.59■■□□□ 1.69
PLXDC1-202ENST00000394318 TRIM41Q8WV44 630 aa25.57■■□□□ 1.68
PLXDC1-202ENST00000394318 PPARGC1BQ86YN6 1023 aaKnown RBP25.5■■□□□ 1.67
PLXDC1-202ENST00000394318 CECR2Q9BXF3 1484 aa25.49■■□□□ 1.67
PLXDC1-202ENST00000394318 TRIM26Q12899 539 aaPredicted RBP25.44■■□□□ 1.66
PLXDC1-202ENST00000394318 FAM9AQ8IZU1 332 aaPredicted RBP25.42■■□□□ 1.66
PLXDC1-202ENST00000394318 MROH2BQ7Z745 1585 aa25.4■■□□□ 1.66
PLXDC1-202ENST00000394318 WIZO95785 1651 aa25.29■■□□□ 1.64
PLXDC1-202ENST00000394318 EHMT2Q96KQ7 1210 aa25.26■■□□□ 1.63
PLXDC1-202ENST00000394318 BAZ1AQ9NRL2 1556 aaPredicted RBP25.09■■□□□ 1.61
PLXDC1-202ENST00000394318 EIF4G1Q04637 1599 aaKnown RBP24.91■■□□□ 1.58
PLXDC1-202ENST00000394318 ZEB1P37275 1124 aaPredicted RBP24.89■■□□□ 1.57
PLXDC1-202ENST00000394318 SMARCA4P51532 1647 aa24.85■■□□□ 1.57
PLXDC1-202ENST00000394318 TOP2AP11388 1531 aaKnown RBP24.85■■□□□ 1.57
PLXDC1-202ENST00000394318 UNC13AQ9UPW8 1703 aa24.83■■□□□ 1.57
PLXDC1-202ENST00000394318 CCDC88BA6NC98 1476 aa24.77■■□□□ 1.56
PLXDC1-202ENST00000394318 ABCC8Q09428 1581 aa24.76■■□□□ 1.55
PLXDC1-202ENST00000394318 PABPN1Q86U42 306 aaKnown RBP eCLIP24.75■■□□□ 1.55
PLXDC1-202ENST00000394318 SMARCA2P51531 1590 aa24.73■■□□□ 1.55
PLXDC1-202ENST00000394318 SOGA1O94964 1423 aa24.53■■□□□ 1.52
PLXDC1-202ENST00000394318 BICRAQ9NZM4 1560 aa24.49■■□□□ 1.51
PLXDC1-202ENST00000394318 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.47■■□□□ 1.51
PLXDC1-202ENST00000394318 TTBK1Q5TCY1 1321 aaPredicted RBP24.46■■□□□ 1.51
PLXDC1-202ENST00000394318 CEP162Q5TB80 1403 aa24.45■■□□□ 1.5
PLXDC1-202ENST00000394318 RUSC2Q8N2Y8 1516 aa24.42■■□□□ 1.5
PLXDC1-202ENST00000394318 CCER1Q8TC90 406 aaPredicted RBP24.4■■□□□ 1.5
PLXDC1-202ENST00000394318 CSRNP3Q8WYN3 585 aa24.4■■□□□ 1.5
PLXDC1-202ENST00000394318 WRNQ14191 1432 aaPredicted RBP eCLIP24.38■■□□□ 1.49
PLXDC1-202ENST00000394318 TNIKQ9UKE5 1360 aa24.37■■□□□ 1.49
PLXDC1-202ENST00000394318 UBTFP17480 764 aaKnown RBP24.37■■□□□ 1.49
PLXDC1-202ENST00000394318 EEA1Q15075 1411 aa24.36■■□□□ 1.49
PLXDC1-202ENST00000394318 PEG3Q9GZU2 1588 aa24.31■■□□□ 1.48
PLXDC1-202ENST00000394318 GOLGA3Q08378 1498 aa24.24■■□□□ 1.47
PLXDC1-202ENST00000394318 SYNJ1O43426 1573 aa24.19■■□□□ 1.46
PLXDC1-202ENST00000394318 ATAD2BQ9ULI0 1458 aa24.19■■□□□ 1.46
PLXDC1-202ENST00000394318 BAZ1BQ9UIG0 1483 aaKnown RBP24.16■■□□□ 1.46
PLXDC1-202ENST00000394318 CEP164Q9UPV0 1460 aa24.09■■□□□ 1.45
PLXDC1-202ENST00000394318 KIF21BO75037 1637 aa24.04■■□□□ 1.44
PLXDC1-202ENST00000394318 SCAF1Q9H7N4 1312 aaKnown RBP24■■□□□ 1.43
PLXDC1-202ENST00000394318 CLIP1P30622 1438 aa23.98■■□□□ 1.43
PLXDC1-202ENST00000394318 RANGAP1P46060 587 aaPredicted RBP23.94■■□□□ 1.42
PLXDC1-202ENST00000394318 DIEXFQ68CQ4 756 aaKnown RBP23.93■■□□□ 1.42
PLXDC1-202ENST00000394318 RAPGEF2Q9Y4G8 1499 aa23.93■■□□□ 1.42
PLXDC1-202ENST00000394318 HNRNPUL2Q1KMD3 747 aaKnown RBP23.88■■□□□ 1.41
PLXDC1-202ENST00000394318 VPS8Q8N3P4 1428 aa23.86■■□□□ 1.41
PLXDC1-202ENST00000394318 TOP2BQ02880 1626 aa23.86■■□□□ 1.41
PLXDC1-202ENST00000394318 APLP2Q06481 763 aa23.84■■□□□ 1.41
PLXDC1-202ENST00000394318 BIVM-ERCC5R4GMW8 1640 aa23.76■■□□□ 1.39
PLXDC1-202ENST00000394318 ACIN1Q9UKV3 1341 aaKnown RBP23.75■■□□□ 1.39
PLXDC1-202ENST00000394318 NEUROD1Q13562 356 aa23.73■■□□□ 1.39
PLXDC1-202ENST00000394318 ZNF316A6NFI3 1004 aaPredicted RBP23.73■■□□□ 1.39
PLXDC1-202ENST00000394318 NCAPD3P42695 1498 aa23.68■■□□□ 1.38
PLXDC1-202ENST00000394318 HMGXB3Q12766 1538 aa23.67■■□□□ 1.38
PLXDC1-202ENST00000394318 PRXQ9BXM0 1461 aa23.64■■□□□ 1.38
PLXDC1-202ENST00000394318 CUX1P39880 1505 aa23.63■■□□□ 1.37
PLXDC1-202ENST00000394318 ERICH3Q5RHP9 1530 aa23.63■■□□□ 1.37
PLXDC1-202ENST00000394318 CENPBP07199 599 aaPredicted RBP23.62■■□□□ 1.37
PLXDC1-202ENST00000394318 ARAP1Q96P48 1450 aa23.57■■□□□ 1.36
PLXDC1-202ENST00000394318 KIF27Q86VH2 1401 aa23.55■■□□□ 1.36
PLXDC1-202ENST00000394318 CFTRP13569 1480 aa23.53■■□□□ 1.36
PLXDC1-202ENST00000394318 GTF3C3Q9Y5Q9 886 aa23.51■■□□□ 1.35
PLXDC1-202ENST00000394318 KANK4Q5T7N3 995 aaPredicted RBP23.5■■□□□ 1.35
PLXDC1-202ENST00000394318 PELP1Q8IZL8 1130 aaKnown RBP23.49■■□□□ 1.35
PLXDC1-202ENST00000394318 YTHDC1Q96MU7 727 aaKnown RBP23.44■■□□□ 1.34
PLXDC1-202ENST00000394318 MIER1Q8N108 512 aa23.41■■□□□ 1.34
PLXDC1-202ENST00000394318 ARHGAP35Q9NRY4 1499 aa23.36■■□□□ 1.33
PLXDC1-202ENST00000394318 DHX57Q6P158 1386 aaKnown RBP23.35■■□□□ 1.33
PLXDC1-202ENST00000394318 CUX2O14529 1486 aa23.34■■□□□ 1.33
PLXDC1-202ENST00000394318 PRDM2Q13029 1718 aa23.33■■□□□ 1.33
PLXDC1-202ENST00000394318 RRBP1Q9P2E9 1410 aaKnown RBP23.3■■□□□ 1.32
PLXDC1-202ENST00000394318 CLSPNQ9HAW4 1339 aa23.29■■□□□ 1.32
PLXDC1-202ENST00000394318 IGF1RP08069 1367 aa23.28■■□□□ 1.32
PLXDC1-202ENST00000394318 CADPSQ9ULU8 1353 aa23.27■■□□□ 1.31
PLXDC1-202ENST00000394318 ITGAEP38570 1179 aa23.26■■□□□ 1.31
PLXDC1-202ENST00000394318 CCNB3Q8WWL7 1395 aa23.24■■□□□ 1.31
PLXDC1-202ENST00000394318 FGD5Q6ZNL6 1462 aa23.22■■□□□ 1.31
PLXDC1-202ENST00000394318 CARMIL1Q5VZK9 1371 aa23.2■■□□□ 1.31
PLXDC1-202ENST00000394318 CC2D2AQ9P2K1 1620 aa23.12■■□□□ 1.29
PLXDC1-202ENST00000394318 TIAM1Q13009 1591 aa23.12■■□□□ 1.29
PLXDC1-202ENST00000394318 P3H3Q8IVL6 736 aa23.08■■□□□ 1.29
PLXDC1-202ENST00000394318 FANCD2Q9BXW9 1451 aa23.06■■□□□ 1.28
PLXDC1-202ENST00000394318 RAB3GAP2Q9H2M9 1393 aa23.05■■□□□ 1.28
PLXDC1-202ENST00000394318 ATP1B4Q9UN42 357 aaPredicted RBP23.05■■□□□ 1.28
PLXDC1-202ENST00000394318 MAP3K1Q13233 1512 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms