RNA–Protein interactions for RNA: ENST00000390428.3

TRAV6-201, Transcript of T cell receptor alpha variable 6, humanhuman

APPRIS P1 BASIC

Gene TRAV6, Length 404 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV6-201ENST00000390428 AEBP2Q6ZN18 517 aaPredicted RBP25.28■■□□□ 1.64
TRAV6-201ENST00000390428 CHIC1Q5VXU3 224 aa24.34■■□□□ 1.49
TRAV6-201ENST00000390428 SENP3Q9H4L4 574 aaPredicted RBP21.46■■□□□ 1.03
TRAV6-201ENST00000390428 PHF23Q9BUL5 403 aaPredicted RBP21.4■■□□□ 1.02
TRAV6-201ENST00000390428 FOXD1Q16676 465 aa19.99■□□□□ 0.79
TRAV6-201ENST00000390428 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
TRAV6-201ENST00000390428 NISCHQ9Y2I1 1504 aa19.39■□□□□ 0.69
TRAV6-201ENST00000390428 PPP6R1Q9UPN7 881 aa18.99■□□□□ 0.63
TRAV6-201ENST00000390428 ADRA2BP18089 450 aa18.93■□□□□ 0.62
TRAV6-201ENST00000390428 PIAS4Q8N2W9 510 aaPredicted RBP18.74■□□□□ 0.59
TRAV6-201ENST00000390428 MSH5O43196 834 aa18.54■□□□□ 0.56
TRAV6-201ENST00000390428 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
TRAV6-201ENST00000390428 ABCC9O60706 1549 aa17.47■□□□□ 0.39
TRAV6-201ENST00000390428 CCDC180Q9P1Z9 1646 aa17.46■□□□□ 0.39
TRAV6-201ENST00000390428 MAPK8IP2Q13387 824 aaPredicted RBP17.3■□□□□ 0.36
TRAV6-201ENST00000390428 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
TRAV6-201ENST00000390428 PPP4R3CPQ6ZMV5 832 aa17.24■□□□□ 0.35
TRAV6-201ENST00000390428 DMRT2Q9Y5R5 561 aa17.09■□□□□ 0.33
TRAV6-201ENST00000390428 CNKSR2Q8WXI2 1034 aa16.82■□□□□ 0.28
TRAV6-201ENST00000390428 NCBP3Q53F19 620 aaKnown RBP16.65■□□□□ 0.26
TRAV6-201ENST00000390428 HOXD11P31277 338 aaPredicted RBP16.62■□□□□ 0.25
TRAV6-201ENST00000390428 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
TRAV6-201ENST00000390428 RNF216Q9NWF9 866 aaPredicted RBP16.58■□□□□ 0.24
TRAV6-201ENST00000390428 NACADO15069 1562 aa16.5■□□□□ 0.23
TRAV6-201ENST00000390428 NPM3O75607 178 aaKnown RBP16.45■□□□□ 0.22
TRAV6-201ENST00000390428 KCNA4P22459 653 aa16.45■□□□□ 0.22
TRAV6-201ENST00000390428 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
TRAV6-201ENST00000390428 DCAF8L2P0C7V8 631 aa16.36■□□□□ 0.21
TRAV6-201ENST00000390428 DCAF8L1A6NGE4 600 aa16.33■□□□□ 0.2
TRAV6-201ENST00000390428 UNC13AQ9UPW8 1703 aa16.31■□□□□ 0.2
TRAV6-201ENST00000390428 MYO15BQ96JP2 1530 aa16.26■□□□□ 0.19
TRAV6-201ENST00000390428 PABPN1Q86U42 306 aaKnown RBP eCLIP16.26■□□□□ 0.19
TRAV6-201ENST00000390428 BICRAQ9NZM4 1560 aa16.15■□□□□ 0.18
TRAV6-201ENST00000390428 ZCCHC6Q5VYS8 1495 aaKnown RBP16.06■□□□□ 0.16
TRAV6-201ENST00000390428 DCAF1Q9Y4B6 1507 aa16.03■□□□□ 0.16
TRAV6-201ENST00000390428 SHROOM4Q9ULL8 1493 aa15.91■□□□□ 0.14
TRAV6-201ENST00000390428 SCRIBQ14160 1630 aa15.88■□□□□ 0.13
TRAV6-201ENST00000390428 RNF39Q9H2S5 420 aa15.87■□□□□ 0.13
TRAV6-201ENST00000390428 CC2D2AQ9P2K1 1620 aa15.81■□□□□ 0.12
TRAV6-201ENST00000390428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.79■□□□□ 0.12
TRAV6-201ENST00000390428 EIF4G1Q04637 1599 aaKnown RBP15.75■□□□□ 0.11
TRAV6-201ENST00000390428 CECR2Q9BXF3 1484 aa15.75■□□□□ 0.11
TRAV6-201ENST00000390428 CACNB1Q02641 598 aaPredicted RBP15.68■□□□□ 0.1
TRAV6-201ENST00000390428 C1QBPQ07021 282 aaKnown RBP15.65■□□□□ 0.1
TRAV6-201ENST00000390428 SLC4A2P04920 1241 aa15.63■□□□□ 0.09
TRAV6-201ENST00000390428 SLC4A1APQ9BWU0 796 aaKnown RBP15.58■□□□□ 0.08
TRAV6-201ENST00000390428 U3KPZ7 1027 aaPredicted RBP15.54■□□□□ 0.08
TRAV6-201ENST00000390428 NCAPD3P42695 1498 aa15.22■□□□□ 0.03
TRAV6-201ENST00000390428 FOXD4L1Q9NU39 408 aa15.22■□□□□ 0.03
TRAV6-201ENST00000390428 SPINK5Q9NQ38 1064 aaPredicted RBP15.21■□□□□ 0.03
TRAV6-201ENST00000390428 MYCNP04198 464 aaPredicted RBP15.18■□□□□ 0.02
TRAV6-201ENST00000390428 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
TRAV6-201ENST00000390428 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
TRAV6-201ENST00000390428 ATAD2BQ9ULI0 1458 aa15.16■□□□□ 0.02
TRAV6-201ENST00000390428 SMARCA4P51532 1647 aa15.15■□□□□ 0.02
TRAV6-201ENST00000390428 DNAJC5Q9H3Z4 198 aa15.15■□□□□ 0.02
TRAV6-201ENST00000390428 ZBTB22O15209 634 aa15.14■□□□□ 0.01
TRAV6-201ENST00000390428 CAPN15O75808 1086 aa15.13■□□□□ 0.01
TRAV6-201ENST00000390428 SMARCA2P51531 1590 aa15.12■□□□□ 0.01
TRAV6-201ENST00000390428 SAMD1Q6SPF0 538 aaPredicted RBP15.11■□□□□ 0.01
TRAV6-201ENST00000390428 HMGXB3Q12766 1538 aa15.11■□□□□ 0.01
TRAV6-201ENST00000390428 CUX2O14529 1486 aa15.09■□□□□ 0.01
TRAV6-201ENST00000390428 APLP2Q06481 763 aa15.09■□□□□ 0.01
TRAV6-201ENST00000390428 ERCC6Q03468 1493 aa15.08■□□□□ 0.01
TRAV6-201ENST00000390428 BAZ1AQ9NRL2 1556 aaPredicted RBP15.07■□□□□ 0
TRAV6-201ENST00000390428 PEG3Q9GZU2 1588 aa15.02□□□□□ -0.01
TRAV6-201ENST00000390428 BAZ1BQ9UIG0 1483 aaKnown RBP15.01□□□□□ -0.01
TRAV6-201ENST00000390428 NESP48681 1621 aa15□□□□□ -0.01
TRAV6-201ENST00000390428 DSG3P32926 999 aa14.99□□□□□ -0.01
TRAV6-201ENST00000390428 TRHP20396 242 aaPredicted RBP14.98□□□□□ -0.01
TRAV6-201ENST00000390428 ZNF219Q9P2Y4 722 aaPredicted RBP14.96□□□□□ -0.01
TRAV6-201ENST00000390428 MROH2BQ7Z745 1585 aa14.94□□□□□ -0.02
TRAV6-201ENST00000390428 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
TRAV6-201ENST00000390428 THOC2Q8NI27 1593 aaKnown RBP14.88□□□□□ -0.03
TRAV6-201ENST00000390428 KIF21AQ7Z4S6 1674 aa14.84□□□□□ -0.03
TRAV6-201ENST00000390428 ATF5Q9Y2D1 282 aaPredicted RBP14.84□□□□□ -0.03
TRAV6-201ENST00000390428 ABCB7O75027 752 aa14.82□□□□□ -0.04
TRAV6-201ENST00000390428 PDS5BQ9NTI5 1447 aa14.8□□□□□ -0.04
TRAV6-201ENST00000390428 WIZO95785 1651 aa14.78□□□□□ -0.04
TRAV6-201ENST00000390428 CSRNP3Q8WYN3 585 aa14.78□□□□□ -0.04
TRAV6-201ENST00000390428 CADPSQ9ULU8 1353 aa14.75□□□□□ -0.05
TRAV6-201ENST00000390428 EHMT2Q96KQ7 1210 aa14.73□□□□□ -0.05
TRAV6-201ENST00000390428 ATXN8OSP0DMR3 200 aa14.72□□□□□ -0.05
TRAV6-201ENST00000390428 POLA2Q14181 598 aa14.68□□□□□ -0.06
TRAV6-201ENST00000390428 MRC2Q9UBG0 1479 aa14.68□□□□□ -0.06
TRAV6-201ENST00000390428 WDR62O43379 1518 aa14.66□□□□□ -0.06
TRAV6-201ENST00000390428 CEP164Q9UPV0 1460 aa14.61□□□□□ -0.07
TRAV6-201ENST00000390428 RSF1Q96T23 1441 aaPredicted RBP14.6□□□□□ -0.07
TRAV6-201ENST00000390428 CFTRP13569 1480 aa14.58□□□□□ -0.08
TRAV6-201ENST00000390428 FANCD2Q9BXW9 1451 aa14.58□□□□□ -0.08
TRAV6-201ENST00000390428 TOP2AP11388 1531 aaKnown RBP14.57□□□□□ -0.08
TRAV6-201ENST00000390428 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
TRAV6-201ENST00000390428 URB2Q14146 1524 aaKnown RBP14.47□□□□□ -0.09
TRAV6-201ENST00000390428 TRIM41Q8WV44 630 aa14.44□□□□□ -0.1
TRAV6-201ENST00000390428 CCDC88BA6NC98 1476 aa14.4□□□□□ -0.1
TRAV6-201ENST00000390428 OSCARQ8IYS5 282 aa14.39□□□□□ -0.11
TRAV6-201ENST00000390428 ZBTB12Q9Y330 459 aaPredicted RBP14.36□□□□□ -0.11
TRAV6-201ENST00000390428 IFT140Q96RY7 1462 aa14.32□□□□□ -0.12
TRAV6-201ENST00000390428 TOPBP1Q92547 1522 aa14.31□□□□□ -0.12
TRAV6-201ENST00000390428 ZNF608Q9ULD9 1512 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms