RNA–Protein interactions for RNA: ENST00000389793.6

LYST-201, Transcript of lysosomal trafficking regulator, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LYST, Length 13,480 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-201ENST00000389793 DCAF8L2P0C7V8 631 aa8.52□□□□□ -1.05
LYST-201ENST00000389793 NISCHQ9Y2I1 1504 aa8.28□□□□□ -1.08
LYST-201ENST00000389793 ABCC9O60706 1549 aa7.9□□□□□ -1.15
LYST-201ENST00000389793 PABPN1Q86U42 306 aaKnown RBP eCLIP7.6□□□□□ -1.19
LYST-201ENST00000389793 FAM9AQ8IZU1 332 aaPredicted RBP7.47□□□□□ -1.21
LYST-201ENST00000389793 AEBP2Q6ZN18 517 aaPredicted RBP7.37□□□□□ -1.23
LYST-201ENST00000389793 RB1CC1Q8TDY2 1594 aa7.37□□□□□ -1.23
LYST-201ENST00000389793 CCDC180Q9P1Z9 1646 aa7.35□□□□□ -1.23
LYST-201ENST00000389793 TRIM41Q8WV44 630 aa7.35□□□□□ -1.23
LYST-201ENST00000389793 SHROOM4Q9ULL8 1493 aa7.31□□□□□ -1.24
LYST-201ENST00000389793 TRHP20396 242 aaPredicted RBP7.26□□□□□ -1.25
LYST-201ENST00000389793 ERCC6Q03468 1493 aa7.25□□□□□ -1.25
LYST-201ENST00000389793 FBLN2P98095 1184 aa7.23□□□□□ -1.25
LYST-201ENST00000389793 TTBK1Q5TCY1 1321 aaPredicted RBP7.19□□□□□ -1.26
LYST-201ENST00000389793 MYT1LQ9UL68 1186 aa7.15□□□□□ -1.26
LYST-201ENST00000389793 NACADO15069 1562 aa7.13□□□□□ -1.27
LYST-201ENST00000389793 SCRIBQ14160 1630 aa7.11□□□□□ -1.27
LYST-201ENST00000389793 NPM1P06748 294 aaKnown RBP eCLIP7.07□□□□□ -1.28
LYST-201ENST00000389793 SUPT5HO00267 1087 aaKnown RBP7.06□□□□□ -1.28
LYST-201ENST00000389793 ATP1B4Q9UN42 357 aaPredicted RBP7.06□□□□□ -1.28
LYST-201ENST00000389793 CECR2Q9BXF3 1484 aa7.03□□□□□ -1.28
LYST-201ENST00000389793 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.01□□□□□ -1.29
LYST-201ENST00000389793 HNRNPUL2Q1KMD3 747 aaKnown RBP7.01□□□□□ -1.29
LYST-201ENST00000389793 PLPPR3Q6T4P5 718 aa6.98□□□□□ -1.29
LYST-201ENST00000389793 DNAJC5BQ9UF47 199 aa6.96□□□□□ -1.3
LYST-201ENST00000389793 RANGAP1P46060 587 aaPredicted RBP6.93□□□□□ -1.3
LYST-201ENST00000389793 EHMT2Q96KQ7 1210 aa6.92□□□□□ -1.3
LYST-201ENST00000389793 CHMP7Q8WUX9 453 aaPredicted RBP6.91□□□□□ -1.3
LYST-201ENST00000389793 CHIC1Q5VXU3 224 aa6.9□□□□□ -1.3
LYST-201ENST00000389793 ESF1Q9H501 851 aaKnown RBP6.88□□□□□ -1.31
LYST-201ENST00000389793 CC2D2AQ9P2K1 1620 aa6.87□□□□□ -1.31
LYST-201ENST00000389793 OSCARQ8IYS5 282 aa6.86□□□□□ -1.31
LYST-201ENST00000389793 CYB5RLQ6IPT4 315 aa6.85□□□□□ -1.31
LYST-201ENST00000389793 UNC13AQ9UPW8 1703 aa6.81□□□□□ -1.32
LYST-201ENST00000389793 PDS5BQ9NTI5 1447 aa6.8□□□□□ -1.32
LYST-201ENST00000389793 ARID4BQ4LE39 1312 aaPredicted RBP6.8□□□□□ -1.32
LYST-201ENST00000389793 BAZ1BQ9UIG0 1483 aaKnown RBP6.79□□□□□ -1.32
LYST-201ENST00000389793 APLP2Q06481 763 aa6.78□□□□□ -1.32
LYST-201ENST00000389793 SMARCA2P51531 1590 aa6.76□□□□□ -1.33
LYST-201ENST00000389793 EIF4G1Q04637 1599 aaKnown RBP6.75□□□□□ -1.33
LYST-201ENST00000389793 BCANQ96GW7 911 aa6.75□□□□□ -1.33
LYST-201ENST00000389793 DNAJC5Q9H3Z4 198 aa6.74□□□□□ -1.33
LYST-201ENST00000389793 SCAF1Q9H7N4 1312 aaKnown RBP6.73□□□□□ -1.33
LYST-201ENST00000389793 UBTFP17480 764 aaKnown RBP6.69□□□□□ -1.34
LYST-201ENST00000389793 CEP164Q9UPV0 1460 aa6.67□□□□□ -1.34
LYST-201ENST00000389793 ZCCHC6Q5VYS8 1495 aaKnown RBP6.66□□□□□ -1.34
LYST-201ENST00000389793 SENP3Q9H4L4 574 aaPredicted RBP6.63□□□□□ -1.35
LYST-201ENST00000389793 KCNH8Q96L42 1107 aa6.62□□□□□ -1.35
LYST-201ENST00000389793 CUX2O14529 1486 aa6.62□□□□□ -1.35
LYST-201ENST00000389793 PHF23Q9BUL5 403 aaPredicted RBP6.62□□□□□ -1.35
LYST-201ENST00000389793 STAG3Q9UJ98 1225 aa6.62□□□□□ -1.35
LYST-201ENST00000389793 ARID3CA6NKF2 412 aa6.61□□□□□ -1.35
LYST-201ENST00000389793 BAZ1AQ9NRL2 1556 aaPredicted RBP6.58□□□□□ -1.36
LYST-201ENST00000389793 FAM69CQ0P6D2 419 aa6.57□□□□□ -1.36
LYST-201ENST00000389793 MLECQ14165 292 aa6.55□□□□□ -1.36
LYST-201ENST00000389793 MYO15BQ96JP2 1530 aa6.54□□□□□ -1.36
LYST-201ENST00000389793 P3H3Q8IVL6 736 aa6.54□□□□□ -1.36
LYST-201ENST00000389793 CDK11AQ9UQ88 783 aaPredicted RBP6.52□□□□□ -1.37
LYST-201ENST00000389793 C14orf37Q86TY3 774 aa6.52□□□□□ -1.37
LYST-201ENST00000389793 MRC2Q9UBG0 1479 aa6.51□□□□□ -1.37
LYST-201ENST00000389793 LAMC3Q9Y6N6 1575 aa6.51□□□□□ -1.37
LYST-201ENST00000389793 DCAF1Q9Y4B6 1507 aa6.5□□□□□ -1.37
LYST-201ENST00000389793 CADPSQ9ULU8 1353 aa6.5□□□□□ -1.37
LYST-201ENST00000389793 FANCD2Q9BXW9 1451 aa6.5□□□□□ -1.37
LYST-201ENST00000389793 FOXD1Q16676 465 aa6.5□□□□□ -1.37
LYST-201ENST00000389793 DCAF8L1A6NGE4 600 aa6.5□□□□□ -1.37
LYST-201ENST00000389793 ZNF777Q9ULD5 760 aaPredicted RBP6.5□□□□□ -1.37
LYST-201ENST00000389793 ABCC8Q09428 1581 aa6.49□□□□□ -1.37
LYST-201ENST00000389793 NESP48681 1621 aa6.49□□□□□ -1.37
LYST-201ENST00000389793 BICRAQ9NZM4 1560 aa6.48□□□□□ -1.37
LYST-201ENST00000389793 SOGA1O94964 1423 aa6.48□□□□□ -1.37
LYST-201ENST00000389793 SMARCA4P51532 1647 aa6.48□□□□□ -1.37
LYST-201ENST00000389793 ATAD2BQ9ULI0 1458 aa6.48□□□□□ -1.37
LYST-201ENST00000389793 HAP1P54257 671 aaPredicted RBP6.46□□□□□ -1.38
LYST-201ENST00000389793 KIF21AQ7Z4S6 1674 aa6.45□□□□□ -1.38
LYST-201ENST00000389793 MEX3CQ5U5Q3 659 aaKnown RBP6.45□□□□□ -1.38
LYST-201ENST00000389793 A0A0G2JS52 829 aa6.44□□□□□ -1.38
LYST-201ENST00000389793 MYT1Q01538 1121 aa6.44□□□□□ -1.38
LYST-201ENST00000389793 TSPOAP1O95153 1857 aa6.43□□□□□ -1.38
LYST-201ENST00000389793 SLC4A1APQ9BWU0 796 aaKnown RBP6.43□□□□□ -1.38
LYST-201ENST00000389793 CHGAP10645 457 aaKnown RBP6.43□□□□□ -1.38
LYST-201ENST00000389793 CARMIL2Q6F5E8 1435 aa6.43□□□□□ -1.38
LYST-201ENST00000389793 WIZO95785 1651 aa6.42□□□□□ -1.38
LYST-201ENST00000389793 PLEKHD1A6NEE1 506 aa6.42□□□□□ -1.38
LYST-201ENST00000389793 JPH4Q96JJ6 628 aa6.41□□□□□ -1.38
LYST-201ENST00000389793 TDRD9Q8NDG6 1382 aaKnown RBP6.4□□□□□ -1.38
LYST-201ENST00000389793 NCAPD3P42695 1498 aa6.4□□□□□ -1.39
LYST-201ENST00000389793 MROH2BQ7Z745 1585 aa6.38□□□□□ -1.39
LYST-201ENST00000389793 PIP4K2BP78356 416 aa6.38□□□□□ -1.39
LYST-201ENST00000389793 IFT140Q96RY7 1462 aa6.37□□□□□ -1.39
LYST-201ENST00000389793 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.37□□□□□ -1.39
LYST-201ENST00000389793 SYNJ1O43426 1573 aa6.36□□□□□ -1.39
LYST-201ENST00000389793 PRDM2Q13029 1718 aa6.36□□□□□ -1.39
LYST-201ENST00000389793 PLEKHG5O94827 1062 aa6.36□□□□□ -1.39
LYST-201ENST00000389793 PPP1R15AO75807 674 aaPredicted RBP6.35□□□□□ -1.39
LYST-201ENST00000389793 ITGAEP38570 1179 aa6.35□□□□□ -1.39
LYST-201ENST00000389793 DMRT2Q9Y5R5 561 aa6.34□□□□□ -1.39
LYST-201ENST00000389793 WRNQ14191 1432 aaPredicted RBP eCLIP6.34□□□□□ -1.39
LYST-201ENST00000389793 HMGXB3Q12766 1538 aa6.33□□□□□ -1.4
LYST-201ENST00000389793 AQRO60306 1485 aaKnown RBP eCLIP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms