RNA–Protein interactions for RNA: ENST00000381284.7

ITSN1-203, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 949 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-203ENST00000381284 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
ITSN1-203ENST00000381284 CHIC1Q5VXU3 224 aa24.49■■□□□ 1.51
ITSN1-203ENST00000381284 SENP3Q9H4L4 574 aaPredicted RBP22.14■■□□□ 1.13
ITSN1-203ENST00000381284 PHF23Q9BUL5 403 aaPredicted RBP21.8■■□□□ 1.08
ITSN1-203ENST00000381284 FOXD1Q16676 465 aa20.57■□□□□ 0.88
ITSN1-203ENST00000381284 NISCHQ9Y2I1 1504 aa19.79■□□□□ 0.76
ITSN1-203ENST00000381284 PLPPR3Q6T4P5 718 aa19.55■□□□□ 0.72
ITSN1-203ENST00000381284 MSH5O43196 834 aa19.4■□□□□ 0.7
ITSN1-203ENST00000381284 PIAS4Q8N2W9 510 aaPredicted RBP19.18■□□□□ 0.66
ITSN1-203ENST00000381284 PPP6R1Q9UPN7 881 aa19.12■□□□□ 0.65
ITSN1-203ENST00000381284 ADRA2BP18089 450 aa19.04■□□□□ 0.64
ITSN1-203ENST00000381284 POTEDQ86YR6 584 aa19■□□□□ 0.63
ITSN1-203ENST00000381284 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
ITSN1-203ENST00000381284 DMRT2Q9Y5R5 561 aa17.53■□□□□ 0.4
ITSN1-203ENST00000381284 MAPK8IP2Q13387 824 aaPredicted RBP17.51■□□□□ 0.39
ITSN1-203ENST00000381284 CCDC180Q9P1Z9 1646 aa17.36■□□□□ 0.37
ITSN1-203ENST00000381284 PPP4R3CPQ6ZMV5 832 aa17.08■□□□□ 0.32
ITSN1-203ENST00000381284 HOXD11P31277 338 aaPredicted RBP16.87■□□□□ 0.29
ITSN1-203ENST00000381284 CNKSR2Q8WXI2 1034 aa16.83■□□□□ 0.28
ITSN1-203ENST00000381284 RNF216Q9NWF9 866 aaPredicted RBP16.72■□□□□ 0.27
ITSN1-203ENST00000381284 DCAF8L1A6NGE4 600 aa16.7■□□□□ 0.26
ITSN1-203ENST00000381284 CACNB1Q02641 598 aaPredicted RBP16.64■□□□□ 0.25
ITSN1-203ENST00000381284 ZCCHC6Q5VYS8 1495 aaKnown RBP16.63■□□□□ 0.25
ITSN1-203ENST00000381284 RNF39Q9H2S5 420 aa16.49■□□□□ 0.23
ITSN1-203ENST00000381284 NCBP3Q53F19 620 aaKnown RBP16.48■□□□□ 0.23
ITSN1-203ENST00000381284 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
ITSN1-203ENST00000381284 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
ITSN1-203ENST00000381284 C1QBPQ07021 282 aaKnown RBP16.32■□□□□ 0.2
ITSN1-203ENST00000381284 MYO15BQ96JP2 1530 aa16.28■□□□□ 0.2
ITSN1-203ENST00000381284 DCAF8L2P0C7V8 631 aa16.26■□□□□ 0.19
ITSN1-203ENST00000381284 ABCC9O60706 1549 aa16.25■□□□□ 0.19
ITSN1-203ENST00000381284 NACADO15069 1562 aa16.15■□□□□ 0.18
ITSN1-203ENST00000381284 NPM3O75607 178 aaKnown RBP16.12■□□□□ 0.17
ITSN1-203ENST00000381284 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.16
ITSN1-203ENST00000381284 SHROOM4Q9ULL8 1493 aa16.01■□□□□ 0.15
ITSN1-203ENST00000381284 RB1CC1Q8TDY2 1594 aa16■□□□□ 0.15
ITSN1-203ENST00000381284 SCRIBQ14160 1630 aa15.83■□□□□ 0.13
ITSN1-203ENST00000381284 KCNA4P22459 653 aa15.67■□□□□ 0.1
ITSN1-203ENST00000381284 U3KPZ7 1027 aaPredicted RBP15.62■□□□□ 0.09
ITSN1-203ENST00000381284 UNC13AQ9UPW8 1703 aa15.59■□□□□ 0.09
ITSN1-203ENST00000381284 SUPT5HO00267 1087 aaKnown RBP15.45■□□□□ 0.06
ITSN1-203ENST00000381284 SLC4A2P04920 1241 aa15.42■□□□□ 0.06
ITSN1-203ENST00000381284 CAPN15O75808 1086 aa15.41■□□□□ 0.06
ITSN1-203ENST00000381284 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
ITSN1-203ENST00000381284 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
ITSN1-203ENST00000381284 DSG3P32926 999 aa15.39■□□□□ 0.05
ITSN1-203ENST00000381284 APLP2Q06481 763 aa15.35■□□□□ 0.05
ITSN1-203ENST00000381284 BAZ1AQ9NRL2 1556 aaPredicted RBP15.33■□□□□ 0.05
ITSN1-203ENST00000381284 RSF1Q96T23 1441 aaPredicted RBP15.32■□□□□ 0.04
ITSN1-203ENST00000381284 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.31■□□□□ 0.04
ITSN1-203ENST00000381284 HNRNPUL2Q1KMD3 747 aaKnown RBP15.31■□□□□ 0.04
ITSN1-203ENST00000381284 CECR2Q9BXF3 1484 aa15.28■□□□□ 0.04
ITSN1-203ENST00000381284 PABPN1Q86U42 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
ITSN1-203ENST00000381284 SMARCA4P51532 1647 aa15.23■□□□□ 0.03
ITSN1-203ENST00000381284 MROH2BQ7Z745 1585 aa15.23■□□□□ 0.03
ITSN1-203ENST00000381284 ZNF219Q9P2Y4 722 aaPredicted RBP15.2■□□□□ 0.02
ITSN1-203ENST00000381284 SAMD1Q6SPF0 538 aaPredicted RBP15.18■□□□□ 0.02
ITSN1-203ENST00000381284 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
ITSN1-203ENST00000381284 WIZO95785 1651 aa15.11■□□□□ 0.01
ITSN1-203ENST00000381284 PEG3Q9GZU2 1588 aa15.07■□□□□ 0
ITSN1-203ENST00000381284 SMARCA2P51531 1590 aa15.04■□□□□ -0
ITSN1-203ENST00000381284 TOP2AP11388 1531 aaKnown RBP15.04■□□□□ -0
ITSN1-203ENST00000381284 ABCB7O75027 752 aa14.98□□□□□ -0.01
ITSN1-203ENST00000381284 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
ITSN1-203ENST00000381284 MYCNP04198 464 aaPredicted RBP14.97□□□□□ -0.01
ITSN1-203ENST00000381284 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
ITSN1-203ENST00000381284 BAZ1BQ9UIG0 1483 aaKnown RBP14.91□□□□□ -0.02
ITSN1-203ENST00000381284 POTEHQ6S545 545 aa14.9□□□□□ -0.02
ITSN1-203ENST00000381284 HMGXB3Q12766 1538 aa14.87□□□□□ -0.03
ITSN1-203ENST00000381284 NCAPD3P42695 1498 aa14.86□□□□□ -0.03
ITSN1-203ENST00000381284 SLC4A1APQ9BWU0 796 aaKnown RBP14.82□□□□□ -0.04
ITSN1-203ENST00000381284 CCDC88BA6NC98 1476 aa14.82□□□□□ -0.04
ITSN1-203ENST00000381284 RBM42Q9BTD8 480 aaKnown RBP14.77□□□□□ -0.05
ITSN1-203ENST00000381284 CC2D2AQ9P2K1 1620 aa14.74□□□□□ -0.05
ITSN1-203ENST00000381284 POLA2Q14181 598 aa14.74□□□□□ -0.05
ITSN1-203ENST00000381284 FOXD4L1Q9NU39 408 aa14.74□□□□□ -0.05
ITSN1-203ENST00000381284 TRIM41Q8WV44 630 aa14.6□□□□□ -0.07
ITSN1-203ENST00000381284 ZBTB12Q9Y330 459 aaPredicted RBP14.54□□□□□ -0.08
ITSN1-203ENST00000381284 PRDM2Q13029 1718 aa14.52□□□□□ -0.08
ITSN1-203ENST00000381284 ATF5Q9Y2D1 282 aaPredicted RBP14.52□□□□□ -0.09
ITSN1-203ENST00000381284 CFTRP13569 1480 aa14.51□□□□□ -0.09
ITSN1-203ENST00000381284 ABCC8Q09428 1581 aa14.47□□□□□ -0.09
ITSN1-203ENST00000381284 CADPSQ9ULU8 1353 aa14.47□□□□□ -0.09
ITSN1-203ENST00000381284 WRNQ14191 1432 aaPredicted RBP eCLIP14.46□□□□□ -0.09
ITSN1-203ENST00000381284 ATXN8OSP0DMR3 200 aa14.41□□□□□ -0.1
ITSN1-203ENST00000381284 CHRDL2Q6WN34 429 aa14.41□□□□□ -0.1
ITSN1-203ENST00000381284 AKT1S1Q96B36 256 aa14.4□□□□□ -0.1
ITSN1-203ENST00000381284 LAMC3Q9Y6N6 1575 aa14.39□□□□□ -0.11
ITSN1-203ENST00000381284 ZBTB22O15209 634 aa14.37□□□□□ -0.11
ITSN1-203ENST00000381284 EEA1Q15075 1411 aa14.36□□□□□ -0.11
ITSN1-203ENST00000381284 TOP2BQ02880 1626 aa14.36□□□□□ -0.11
ITSN1-203ENST00000381284 BIVM-ERCC5R4GMW8 1640 aa14.35□□□□□ -0.11
ITSN1-203ENST00000381284 SYNJ1O43426 1573 aa14.34□□□□□ -0.11
ITSN1-203ENST00000381284 FANCD2Q9BXW9 1451 aa14.3□□□□□ -0.12
ITSN1-203ENST00000381284 PDS5BQ9NTI5 1447 aa14.28□□□□□ -0.12
ITSN1-203ENST00000381284 CUX1P39880 1505 aa14.25□□□□□ -0.13
ITSN1-203ENST00000381284 CEP164Q9UPV0 1460 aa14.24□□□□□ -0.13
ITSN1-203ENST00000381284 NESP48681 1621 aa14.23□□□□□ -0.13
ITSN1-203ENST00000381284 FAM9AQ8IZU1 332 aaPredicted RBP14.23□□□□□ -0.13
ITSN1-203ENST00000381284 DNMBPQ6XZF7 1577 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms