RNA–Protein interactions for RNA: ENST00000381181.1

LINC00649-201, long intergenic non-protein coding RNA 649, humanhuman

TSL 2

Gene LINC00649, Length 2,261 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-201ENST00000381181 NISCHQ9Y2I1 1504 aa19.51■□□□□ 0.71
LINC00649-201ENST00000381181 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
LINC00649-201ENST00000381181 ZCCHC6Q5VYS8 1495 aaKnown RBP16.4■□□□□ 0.22
LINC00649-201ENST00000381181 HRCP23327 699 aa16.34■□□□□ 0.21
LINC00649-201ENST00000381181 DCAF1Q9Y4B6 1507 aa16.22■□□□□ 0.19
LINC00649-201ENST00000381181 PPARGC1BQ86YN6 1023 aaKnown RBP16.11■□□□□ 0.17
LINC00649-201ENST00000381181 MYO15BQ96JP2 1530 aa16.06■□□□□ 0.16
LINC00649-201ENST00000381181 ABCC9O60706 1549 aa16.01■□□□□ 0.15
LINC00649-201ENST00000381181 DCAF8L2P0C7V8 631 aa15.98■□□□□ 0.15
LINC00649-201ENST00000381181 PELP1Q8IZL8 1130 aaKnown RBP15.97■□□□□ 0.15
LINC00649-201ENST00000381181 NACADO15069 1562 aa15.92■□□□□ 0.14
LINC00649-201ENST00000381181 PCGF6Q9BYE7 350 aa15.89■□□□□ 0.13
LINC00649-201ENST00000381181 RB1CC1Q8TDY2 1594 aa15.77■□□□□ 0.11
LINC00649-201ENST00000381181 SHROOM4Q9ULL8 1493 aa15.75■□□□□ 0.11
LINC00649-201ENST00000381181 SUPT5HO00267 1087 aaKnown RBP15.68■□□□□ 0.1
LINC00649-201ENST00000381181 SCAF1Q9H7N4 1312 aaKnown RBP15.67■□□□□ 0.1
LINC00649-201ENST00000381181 SCRIBQ14160 1630 aa15.59■□□□□ 0.09
LINC00649-201ENST00000381181 CHIC1Q5VXU3 224 aa15.53■□□□□ 0.08
LINC00649-201ENST00000381181 UNC13AQ9UPW8 1703 aa15.36■□□□□ 0.05
LINC00649-201ENST00000381181 MYT1Q01538 1121 aa15.34■□□□□ 0.05
LINC00649-201ENST00000381181 TRIM26Q12899 539 aaPredicted RBP15.26■□□□□ 0.03
LINC00649-201ENST00000381181 LOC105371045A0A1W2PR82 267 aa15.25■□□□□ 0.03
LINC00649-201ENST00000381181 BICRAQ9NZM4 1560 aa15.2■□□□□ 0.02
LINC00649-201ENST00000381181 NEUROD1Q13562 356 aa15.13■□□□□ 0.01
LINC00649-201ENST00000381181 ACIN1Q9UKV3 1341 aaKnown RBP15.13■□□□□ 0.01
LINC00649-201ENST00000381181 ZEB1P37275 1124 aaPredicted RBP15.13■□□□□ 0.01
LINC00649-201ENST00000381181 BAZ1AQ9NRL2 1556 aaPredicted RBP15.11■□□□□ 0.01
LINC00649-201ENST00000381181 RSF1Q96T23 1441 aaPredicted RBP15.1■□□□□ 0.01
LINC00649-201ENST00000381181 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
LINC00649-201ENST00000381181 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
LINC00649-201ENST00000381181 GTF3C3Q9Y5Q9 886 aa15.03■□□□□ -0
LINC00649-201ENST00000381181 MROH2BQ7Z745 1585 aa15.01□□□□□ -0.01
LINC00649-201ENST00000381181 SMARCA4P51532 1647 aa15□□□□□ -0.01
LINC00649-201ENST00000381181 WIZO95785 1651 aa14.88□□□□□ -0.03
LINC00649-201ENST00000381181 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
LINC00649-201ENST00000381181 TOP2AP11388 1531 aaKnown RBP14.82□□□□□ -0.04
LINC00649-201ENST00000381181 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
LINC00649-201ENST00000381181 CENPBP07199 599 aaPredicted RBP14.78□□□□□ -0.04
LINC00649-201ENST00000381181 EIF4G1Q04637 1599 aaKnown RBP14.78□□□□□ -0.04
LINC00649-201ENST00000381181 ATAD2BQ9ULI0 1458 aa14.74□□□□□ -0.05
LINC00649-201ENST00000381181 DIEXFQ68CQ4 756 aaKnown RBP14.71□□□□□ -0.05
LINC00649-201ENST00000381181 BAZ1BQ9UIG0 1483 aaKnown RBP14.68□□□□□ -0.06
LINC00649-201ENST00000381181 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.67□□□□□ -0.06
LINC00649-201ENST00000381181 HMGXB3Q12766 1538 aa14.67□□□□□ -0.06
LINC00649-201ENST00000381181 NCAPD3P42695 1498 aa14.65□□□□□ -0.06
LINC00649-201ENST00000381181 CCDC88BA6NC98 1476 aa14.6□□□□□ -0.07
LINC00649-201ENST00000381181 BCL11AQ9H165 835 aa14.57□□□□□ -0.08
LINC00649-201ENST00000381181 CCER1Q8TC90 406 aaPredicted RBP14.56□□□□□ -0.08
LINC00649-201ENST00000381181 YTHDC1Q96MU7 727 aaKnown RBP14.55□□□□□ -0.08
LINC00649-201ENST00000381181 CC2D2AQ9P2K1 1620 aa14.54□□□□□ -0.08
LINC00649-201ENST00000381181 FAM9AQ8IZU1 332 aaPredicted RBP14.52□□□□□ -0.09
LINC00649-201ENST00000381181 TRIM41Q8WV44 630 aa14.51□□□□□ -0.09
LINC00649-201ENST00000381181 EHMT2Q96KQ7 1210 aa14.51□□□□□ -0.09
LINC00649-201ENST00000381181 TTBK1Q5TCY1 1321 aaPredicted RBP14.45□□□□□ -0.1
LINC00649-201ENST00000381181 MIER1Q8N108 512 aa14.38□□□□□ -0.11
LINC00649-201ENST00000381181 ANP32EQ9BTT0 268 aa14.38□□□□□ -0.11
LINC00649-201ENST00000381181 ZNF316A6NFI3 1004 aaPredicted RBP14.36□□□□□ -0.11
LINC00649-201ENST00000381181 CFTRP13569 1480 aa14.32□□□□□ -0.12
LINC00649-201ENST00000381181 CSRNP3Q8WYN3 585 aa14.3□□□□□ -0.12
LINC00649-201ENST00000381181 PRDM2Q13029 1718 aa14.3□□□□□ -0.12
LINC00649-201ENST00000381181 TSHZ2Q9NRE2 1034 aa14.29□□□□□ -0.12
LINC00649-201ENST00000381181 SUPT16HQ9Y5B9 1047 aaKnown RBP14.26□□□□□ -0.13
LINC00649-201ENST00000381181 CADPSQ9ULU8 1353 aa14.25□□□□□ -0.13
LINC00649-201ENST00000381181 ABCC8Q09428 1581 aa14.25□□□□□ -0.13
LINC00649-201ENST00000381181 WRNQ14191 1432 aaPredicted RBP eCLIP14.25□□□□□ -0.13
LINC00649-201ENST00000381181 LAMC3Q9Y6N6 1575 aa14.18□□□□□ -0.14
LINC00649-201ENST00000381181 PRKCSHP14314 528 aaPredicted RBP14.16□□□□□ -0.14
LINC00649-201ENST00000381181 TOP2BQ02880 1626 aa14.15□□□□□ -0.14
LINC00649-201ENST00000381181 BIVM-ERCC5R4GMW8 1640 aa14.14□□□□□ -0.15
LINC00649-201ENST00000381181 SYNJ1O43426 1573 aa14.14□□□□□ -0.15
LINC00649-201ENST00000381181 EEA1Q15075 1411 aa14.14□□□□□ -0.15
LINC00649-201ENST00000381181 FANCD2Q9BXW9 1451 aa14.09□□□□□ -0.15
LINC00649-201ENST00000381181 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
LINC00649-201ENST00000381181 CUX1P39880 1505 aa14.06□□□□□ -0.16
LINC00649-201ENST00000381181 CLSPNQ9HAW4 1339 aa14.04□□□□□ -0.16
LINC00649-201ENST00000381181 CEP164Q9UPV0 1460 aa14.03□□□□□ -0.16
LINC00649-201ENST00000381181 NESP48681 1621 aa14.03□□□□□ -0.16
LINC00649-201ENST00000381181 DNAJC5BQ9UF47 199 aa14.01□□□□□ -0.17
LINC00649-201ENST00000381181 DNMBPQ6XZF7 1577 aa14□□□□□ -0.17
LINC00649-201ENST00000381181 SOGA1O94964 1423 aa13.98□□□□□ -0.17
LINC00649-201ENST00000381181 TOPBP1Q92547 1522 aa13.94□□□□□ -0.18
LINC00649-201ENST00000381181 BCANQ96GW7 911 aa13.93□□□□□ -0.18
LINC00649-201ENST00000381181 KIF27Q86VH2 1401 aa13.92□□□□□ -0.18
LINC00649-201ENST00000381181 KIF21AQ7Z4S6 1674 aa13.92□□□□□ -0.18
LINC00649-201ENST00000381181 FGD5Q6ZNL6 1462 aa13.92□□□□□ -0.18
LINC00649-201ENST00000381181 KIF21BO75037 1637 aa13.9□□□□□ -0.18
LINC00649-201ENST00000381181 CEP162Q5TB80 1403 aa13.9□□□□□ -0.19
LINC00649-201ENST00000381181 RUSC2Q8N2Y8 1516 aa13.89□□□□□ -0.19
LINC00649-201ENST00000381181 RBM19Q9Y4C8 960 aaKnown RBP13.89□□□□□ -0.19
LINC00649-201ENST00000381181 HNRNPUL2Q1KMD3 747 aaKnown RBP13.88□□□□□ -0.19
LINC00649-201ENST00000381181 GOLGA3Q08378 1498 aa13.88□□□□□ -0.19
LINC00649-201ENST00000381181 URB2Q14146 1524 aaKnown RBP13.88□□□□□ -0.19
LINC00649-201ENST00000381181 MSH5O43196 834 aa13.88□□□□□ -0.19
LINC00649-201ENST00000381181 POLA1P09884 1462 aaPredicted RBP13.86□□□□□ -0.19
LINC00649-201ENST00000381181 MRC2Q9UBG0 1479 aa13.86□□□□□ -0.19
LINC00649-201ENST00000381181 KCNH8Q96L42 1107 aa13.84□□□□□ -0.19
LINC00649-201ENST00000381181 ABCA10Q8WWZ4 1543 aa13.84□□□□□ -0.19
LINC00649-201ENST00000381181 CUX2O14529 1486 aa13.83□□□□□ -0.2
LINC00649-201ENST00000381181 ERICH3Q5RHP9 1530 aa13.83□□□□□ -0.2
LINC00649-201ENST00000381181 TNIKQ9UKE5 1360 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms