RNA–Protein interactions for RNA: ENST00000371118.1

ATG4C-202, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-202ENST00000371118 AEBP2Q6ZN18 517 aaPredicted RBP20.79■□□□□ 0.92
ATG4C-202ENST00000371118 CHIC1Q5VXU3 224 aa19.48■□□□□ 0.71
ATG4C-202ENST00000371118 SENP3Q9H4L4 574 aaPredicted RBP17.97■□□□□ 0.47
ATG4C-202ENST00000371118 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
ATG4C-202ENST00000371118 PHF23Q9BUL5 403 aaPredicted RBP17.54■□□□□ 0.4
ATG4C-202ENST00000371118 FOXD1Q16676 465 aa16.82■□□□□ 0.28
ATG4C-202ENST00000371118 MSH5O43196 834 aa16.22■□□□□ 0.19
ATG4C-202ENST00000371118 NISCHQ9Y2I1 1504 aa15.57■□□□□ 0.08
ATG4C-202ENST00000371118 PIAS4Q8N2W9 510 aaPredicted RBP15.48■□□□□ 0.07
ATG4C-202ENST00000371118 ABCC9O60706 1549 aa15.05■□□□□ -0
ATG4C-202ENST00000371118 PPP6R1Q9UPN7 881 aa14.89□□□□□ -0.03
ATG4C-202ENST00000371118 PLPPR3Q6T4P5 718 aa14.83□□□□□ -0.04
ATG4C-202ENST00000371118 ADRA2BP18089 450 aa14.77□□□□□ -0.05
ATG4C-202ENST00000371118 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
ATG4C-202ENST00000371118 CACNB1Q02641 598 aaPredicted RBP14.52□□□□□ -0.09
ATG4C-202ENST00000371118 CCDC180Q9P1Z9 1646 aa14.19□□□□□ -0.14
ATG4C-202ENST00000371118 DMRT2Q9Y5R5 561 aa14.07□□□□□ -0.16
ATG4C-202ENST00000371118 PABPN1Q86U42 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
ATG4C-202ENST00000371118 DNAJC5Q9H3Z4 198 aa13.99□□□□□ -0.17
ATG4C-202ENST00000371118 RB1CC1Q8TDY2 1594 aa13.91□□□□□ -0.18
ATG4C-202ENST00000371118 MAPK8IP2Q13387 824 aaPredicted RBP13.88□□□□□ -0.19
ATG4C-202ENST00000371118 DCAF8L2P0C7V8 631 aa13.76□□□□□ -0.21
ATG4C-202ENST00000371118 RNF39Q9H2S5 420 aa13.71□□□□□ -0.21
ATG4C-202ENST00000371118 NACADO15069 1562 aa13.62□□□□□ -0.23
ATG4C-202ENST00000371118 SCAF1Q9H7N4 1312 aaKnown RBP13.61□□□□□ -0.23
ATG4C-202ENST00000371118 POTEHQ6S545 545 aa13.59□□□□□ -0.23
ATG4C-202ENST00000371118 CECR2Q9BXF3 1484 aa13.59□□□□□ -0.23
ATG4C-202ENST00000371118 UNC13AQ9UPW8 1703 aa13.57□□□□□ -0.24
ATG4C-202ENST00000371118 BICRAQ9NZM4 1560 aa13.5□□□□□ -0.25
ATG4C-202ENST00000371118 DCAF8L1A6NGE4 600 aa13.5□□□□□ -0.25
ATG4C-202ENST00000371118 C1QBPQ07021 282 aaKnown RBP13.49□□□□□ -0.25
ATG4C-202ENST00000371118 CC2D2AQ9P2K1 1620 aa13.48□□□□□ -0.25
ATG4C-202ENST00000371118 EIF4G1Q04637 1599 aaKnown RBP13.26□□□□□ -0.29
ATG4C-202ENST00000371118 TRIM41Q8WV44 630 aa13.26□□□□□ -0.29
ATG4C-202ENST00000371118 HOXD11P31277 338 aaPredicted RBP13.14□□□□□ -0.31
ATG4C-202ENST00000371118 SHROOM4Q9ULL8 1493 aa13.14□□□□□ -0.31
ATG4C-202ENST00000371118 CUX2O14529 1486 aa13.12□□□□□ -0.31
ATG4C-202ENST00000371118 MYO15BQ96JP2 1530 aa13.1□□□□□ -0.31
ATG4C-202ENST00000371118 ERCC6Q03468 1493 aa13.05□□□□□ -0.32
ATG4C-202ENST00000371118 SCRIBQ14160 1630 aa13.04□□□□□ -0.32
ATG4C-202ENST00000371118 PPP4R3CPQ6ZMV5 832 aa13.04□□□□□ -0.32
ATG4C-202ENST00000371118 KCNA4P22459 653 aa12.95□□□□□ -0.34
ATG4C-202ENST00000371118 NCBP3Q53F19 620 aaKnown RBP12.84□□□□□ -0.35
ATG4C-202ENST00000371118 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
ATG4C-202ENST00000371118 ZCCHC6Q5VYS8 1495 aaKnown RBP12.72□□□□□ -0.37
ATG4C-202ENST00000371118 NESP48681 1621 aa12.72□□□□□ -0.37
ATG4C-202ENST00000371118 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.38
ATG4C-202ENST00000371118 CNKSR2Q8WXI2 1034 aa12.67□□□□□ -0.38
ATG4C-202ENST00000371118 THOC2Q8NI27 1593 aaKnown RBP12.6□□□□□ -0.39
ATG4C-202ENST00000371118 SMARCA2P51531 1590 aa12.6□□□□□ -0.39
ATG4C-202ENST00000371118 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
ATG4C-202ENST00000371118 OSCARQ8IYS5 282 aa12.55□□□□□ -0.4
ATG4C-202ENST00000371118 NPM3O75607 178 aaKnown RBP12.54□□□□□ -0.4
ATG4C-202ENST00000371118 TRHP20396 242 aaPredicted RBP12.51□□□□□ -0.41
ATG4C-202ENST00000371118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.5□□□□□ -0.41
ATG4C-202ENST00000371118 ATAD2BQ9ULI0 1458 aa12.48□□□□□ -0.41
ATG4C-202ENST00000371118 KIF21AQ7Z4S6 1674 aa12.48□□□□□ -0.41
ATG4C-202ENST00000371118 BAZ1AQ9NRL2 1556 aaPredicted RBP12.47□□□□□ -0.41
ATG4C-202ENST00000371118 DSG3P32926 999 aa12.47□□□□□ -0.41
ATG4C-202ENST00000371118 EHMT2Q96KQ7 1210 aa12.44□□□□□ -0.42
ATG4C-202ENST00000371118 PDS5BQ9NTI5 1447 aa12.43□□□□□ -0.42
ATG4C-202ENST00000371118 LAMC3Q9Y6N6 1575 aa12.41□□□□□ -0.42
ATG4C-202ENST00000371118 HMGXB3Q12766 1538 aa12.39□□□□□ -0.43
ATG4C-202ENST00000371118 SLC4A1APQ9BWU0 796 aaKnown RBP12.39□□□□□ -0.43
ATG4C-202ENST00000371118 RIMBP3CA6NJZ7 1639 aa12.38□□□□□ -0.43
ATG4C-202ENST00000371118 RIMBP3BA6NNM3 1639 aa12.38□□□□□ -0.43
ATG4C-202ENST00000371118 RIMBP3Q9UFD9 1639 aa12.38□□□□□ -0.43
ATG4C-202ENST00000371118 CYB5RLQ6IPT4 315 aa12.37□□□□□ -0.43
ATG4C-202ENST00000371118 BAZ1BQ9UIG0 1483 aaKnown RBP12.37□□□□□ -0.43
ATG4C-202ENST00000371118 MRC2Q9UBG0 1479 aa12.34□□□□□ -0.43
ATG4C-202ENST00000371118 WDR62O43379 1518 aa12.29□□□□□ -0.44
ATG4C-202ENST00000371118 SMARCA4P51532 1647 aa12.29□□□□□ -0.44
ATG4C-202ENST00000371118 CAPN15O75808 1086 aa12.27□□□□□ -0.45
ATG4C-202ENST00000371118 ARHGEF11O15085 1522 aa12.27□□□□□ -0.45
ATG4C-202ENST00000371118 SP7Q8TDD2 431 aaPredicted RBP12.25□□□□□ -0.45
ATG4C-202ENST00000371118 CADPSQ9ULU8 1353 aa12.23□□□□□ -0.45
ATG4C-202ENST00000371118 SPINK5Q9NQ38 1064 aaPredicted RBP12.22□□□□□ -0.45
ATG4C-202ENST00000371118 CEP164Q9UPV0 1460 aa12.17□□□□□ -0.46
ATG4C-202ENST00000371118 ILDR1Q86SU0 546 aaPredicted RBP12.16□□□□□ -0.46
ATG4C-202ENST00000371118 CSRNP3Q8WYN3 585 aa12.11□□□□□ -0.47
ATG4C-202ENST00000371118 ARAP1Q96P48 1450 aa12.1□□□□□ -0.47
ATG4C-202ENST00000371118 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
ATG4C-202ENST00000371118 CHRDL2Q6WN34 429 aa12.1□□□□□ -0.47
ATG4C-202ENST00000371118 U3KPZ7 1027 aaPredicted RBP12.1□□□□□ -0.47
ATG4C-202ENST00000371118 PEG3Q9GZU2 1588 aa12.09□□□□□ -0.47
ATG4C-202ENST00000371118 FBLN2P98095 1184 aa12.07□□□□□ -0.48
ATG4C-202ENST00000371118 URB2Q14146 1524 aaKnown RBP12.03□□□□□ -0.48
ATG4C-202ENST00000371118 ZNF608Q9ULD9 1512 aaPredicted RBP12.03□□□□□ -0.48
ATG4C-202ENST00000371118 MROH2BQ7Z745 1585 aa12.03□□□□□ -0.48
ATG4C-202ENST00000371118 RBM42Q9BTD8 480 aaKnown RBP11.98□□□□□ -0.49
ATG4C-202ENST00000371118 CHD1O14646 1710 aa11.94□□□□□ -0.5
ATG4C-202ENST00000371118 IFT140Q96RY7 1462 aa11.93□□□□□ -0.5
ATG4C-202ENST00000371118 RSF1Q96T23 1441 aaPredicted RBP11.92□□□□□ -0.5
ATG4C-202ENST00000371118 ZBTB22O15209 634 aa11.91□□□□□ -0.5
ATG4C-202ENST00000371118 CFTRP13569 1480 aa11.9□□□□□ -0.5
ATG4C-202ENST00000371118 AQRO60306 1485 aaKnown RBP eCLIP11.88□□□□□ -0.51
ATG4C-202ENST00000371118 EIF4G3O43432 1585 aaKnown RBP11.88□□□□□ -0.51
ATG4C-202ENST00000371118 WIZO95785 1651 aa11.87□□□□□ -0.51
ATG4C-202ENST00000371118 ABCB7O75027 752 aa11.87□□□□□ -0.51
ATG4C-202ENST00000371118 FOXD4L1Q9NU39 408 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms