RNA–Protein interactions for RNA: ENST00000369529.1

SMIM9-201, Transcript of small integral membrane protein 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMIM9, Length 904 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM9-201ENST00000369529 AEBP2Q6ZN18 517 aaPredicted RBP27.2■■□□□ 1.94
SMIM9-201ENST00000369529 CHIC1Q5VXU3 224 aa25.32■■□□□ 1.64
SMIM9-201ENST00000369529 SENP3Q9H4L4 574 aaPredicted RBP23.2■■□□□ 1.3
SMIM9-201ENST00000369529 PHF23Q9BUL5 403 aaPredicted RBP22.88■■□□□ 1.25
SMIM9-201ENST00000369529 FOXD1Q16676 465 aa21.76■■□□□ 1.07
SMIM9-201ENST00000369529 POTEDQ86YR6 584 aa21.02■□□□□ 0.96
SMIM9-201ENST00000369529 NISCHQ9Y2I1 1504 aa20.66■□□□□ 0.9
SMIM9-201ENST00000369529 MSH5O43196 834 aa20.5■□□□□ 0.87
SMIM9-201ENST00000369529 PIAS4Q8N2W9 510 aaPredicted RBP20.17■□□□□ 0.82
SMIM9-201ENST00000369529 PPP6R1Q9UPN7 881 aa19.97■□□□□ 0.79
SMIM9-201ENST00000369529 PLPPR3Q6T4P5 718 aa19.88■□□□□ 0.77
SMIM9-201ENST00000369529 ADRA2BP18089 450 aa19.85■□□□□ 0.77
SMIM9-201ENST00000369529 MAPK8IP2Q13387 824 aaPredicted RBP18.43■□□□□ 0.54
SMIM9-201ENST00000369529 DMRT2Q9Y5R5 561 aa18.33■□□□□ 0.52
SMIM9-201ENST00000369529 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
SMIM9-201ENST00000369529 CCDC180Q9P1Z9 1646 aa18.05■□□□□ 0.48
SMIM9-201ENST00000369529 CACNB1Q02641 598 aaPredicted RBP17.98■□□□□ 0.47
SMIM9-201ENST00000369529 DCAF8L1A6NGE4 600 aa17.63■□□□□ 0.41
SMIM9-201ENST00000369529 RNF39Q9H2S5 420 aa17.48■□□□□ 0.39
SMIM9-201ENST00000369529 HOXD11P31277 338 aaPredicted RBP17.44■□□□□ 0.38
SMIM9-201ENST00000369529 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
SMIM9-201ENST00000369529 ZCCHC6Q5VYS8 1495 aaKnown RBP17.36■□□□□ 0.37
SMIM9-201ENST00000369529 C1QBPQ07021 282 aaKnown RBP17.16■□□□□ 0.34
SMIM9-201ENST00000369529 CNKSR2Q8WXI2 1034 aa17.16■□□□□ 0.34
SMIM9-201ENST00000369529 DCAF8L2P0C7V8 631 aa17.15■□□□□ 0.34
SMIM9-201ENST00000369529 RNF216Q9NWF9 866 aaPredicted RBP17.14■□□□□ 0.33
SMIM9-201ENST00000369529 SHROOM4Q9ULL8 1493 aa17.05■□□□□ 0.32
SMIM9-201ENST00000369529 ABCC9O60706 1549 aa17.05■□□□□ 0.32
SMIM9-201ENST00000369529 DCAF1Q9Y4B6 1507 aa16.99■□□□□ 0.31
SMIM9-201ENST00000369529 DNAJC5BQ9UF47 199 aa16.89■□□□□ 0.29
SMIM9-201ENST00000369529 NACADO15069 1562 aa16.72■□□□□ 0.27
SMIM9-201ENST00000369529 MYO15BQ96JP2 1530 aa16.71■□□□□ 0.27
SMIM9-201ENST00000369529 SCRIBQ14160 1630 aa16.7■□□□□ 0.26
SMIM9-201ENST00000369529 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.63■□□□□ 0.25
SMIM9-201ENST00000369529 RB1CC1Q8TDY2 1594 aa16.6■□□□□ 0.25
SMIM9-201ENST00000369529 UNC13AQ9UPW8 1703 aa16.51■□□□□ 0.23
SMIM9-201ENST00000369529 NCBP3Q53F19 620 aaKnown RBP16.5■□□□□ 0.23
SMIM9-201ENST00000369529 SUPT5HO00267 1087 aaKnown RBP16.39■□□□□ 0.21
SMIM9-201ENST00000369529 POTEHQ6S545 545 aa16.35■□□□□ 0.21
SMIM9-201ENST00000369529 NPM3O75607 178 aaKnown RBP16.32■□□□□ 0.2
SMIM9-201ENST00000369529 U3KPZ7 1027 aaPredicted RBP16.22■□□□□ 0.19
SMIM9-201ENST00000369529 DSG3P32926 999 aa16.2■□□□□ 0.18
SMIM9-201ENST00000369529 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
SMIM9-201ENST00000369529 CAPN15O75808 1086 aa16.15■□□□□ 0.18
SMIM9-201ENST00000369529 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
SMIM9-201ENST00000369529 CECR2Q9BXF3 1484 aa16.1■□□□□ 0.17
SMIM9-201ENST00000369529 PABPN1Q86U42 306 aaKnown RBP eCLIP16.08■□□□□ 0.16
SMIM9-201ENST00000369529 RSF1Q96T23 1441 aaPredicted RBP16.03■□□□□ 0.16
SMIM9-201ENST00000369529 MROH2BQ7Z745 1585 aa16.02■□□□□ 0.16
SMIM9-201ENST00000369529 WIZO95785 1651 aa15.99■□□□□ 0.15
SMIM9-201ENST00000369529 BAZ1AQ9NRL2 1556 aaPredicted RBP15.95■□□□□ 0.14
SMIM9-201ENST00000369529 SMARCA4P51532 1647 aa15.94■□□□□ 0.14
SMIM9-201ENST00000369529 TRHP20396 242 aaPredicted RBP15.78■□□□□ 0.12
SMIM9-201ENST00000369529 ABCB7O75027 752 aa15.76■□□□□ 0.11
SMIM9-201ENST00000369529 SLC4A2P04920 1241 aa15.75■□□□□ 0.11
SMIM9-201ENST00000369529 TOP2AP11388 1531 aaKnown RBP15.71■□□□□ 0.11
SMIM9-201ENST00000369529 ZNF219Q9P2Y4 722 aaPredicted RBP15.65■□□□□ 0.1
SMIM9-201ENST00000369529 EIF4G1Q04637 1599 aaKnown RBP15.63■□□□□ 0.09
SMIM9-201ENST00000369529 PEG3Q9GZU2 1588 aa15.63■□□□□ 0.09
SMIM9-201ENST00000369529 APLP2Q06481 763 aa15.6■□□□□ 0.09
SMIM9-201ENST00000369529 SMARCA2P51531 1590 aa15.6■□□□□ 0.09
SMIM9-201ENST00000369529 ATAD2BQ9ULI0 1458 aa15.58■□□□□ 0.08
SMIM9-201ENST00000369529 CCDC88BA6NC98 1476 aa15.54■□□□□ 0.08
SMIM9-201ENST00000369529 KCNA4P22459 653 aa15.54■□□□□ 0.08
SMIM9-201ENST00000369529 BAZ1BQ9UIG0 1483 aaKnown RBP15.52■□□□□ 0.08
SMIM9-201ENST00000369529 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
SMIM9-201ENST00000369529 HNRNPUL2Q1KMD3 747 aaKnown RBP15.49■□□□□ 0.07
SMIM9-201ENST00000369529 CC2D2AQ9P2K1 1620 aa15.43■□□□□ 0.06
SMIM9-201ENST00000369529 HMGXB3Q12766 1538 aa15.4■□□□□ 0.06
SMIM9-201ENST00000369529 SAMD1Q6SPF0 538 aaPredicted RBP15.4■□□□□ 0.06
SMIM9-201ENST00000369529 RBM42Q9BTD8 480 aaKnown RBP15.39■□□□□ 0.05
SMIM9-201ENST00000369529 NCAPD3P42695 1498 aa15.38■□□□□ 0.05
SMIM9-201ENST00000369529 ABCC8Q09428 1581 aa15.35■□□□□ 0.05
SMIM9-201ENST00000369529 CHRDL2Q6WN34 429 aa15.33■□□□□ 0.04
SMIM9-201ENST00000369529 TRIM41Q8WV44 630 aa15.33■□□□□ 0.04
SMIM9-201ENST00000369529 PRDM2Q13029 1718 aa15.26■□□□□ 0.03
SMIM9-201ENST00000369529 POLA2Q14181 598 aa15.23■□□□□ 0.03
SMIM9-201ENST00000369529 FAM9AQ8IZU1 332 aaPredicted RBP15.18■□□□□ 0.02
SMIM9-201ENST00000369529 SYNJ1O43426 1573 aa15.14■□□□□ 0.01
SMIM9-201ENST00000369529 LOC105371045A0A1W2PR82 267 aa15.13■□□□□ 0.01
SMIM9-201ENST00000369529 WRNQ14191 1432 aaPredicted RBP eCLIP15.1■□□□□ 0.01
SMIM9-201ENST00000369529 CFTRP13569 1480 aa15.07■□□□□ 0
SMIM9-201ENST00000369529 MYCNP04198 464 aaPredicted RBP15.06■□□□□ 0
SMIM9-201ENST00000369529 SP7Q8TDD2 431 aaPredicted RBP15.05■□□□□ -0
SMIM9-201ENST00000369529 EHMT2Q96KQ7 1210 aa15.05■□□□□ -0
SMIM9-201ENST00000369529 BIVM-ERCC5R4GMW8 1640 aa15.05■□□□□ -0
SMIM9-201ENST00000369529 TOP2BQ02880 1626 aa15.02□□□□□ -0.01
SMIM9-201ENST00000369529 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
SMIM9-201ENST00000369529 NESP48681 1621 aa14.99□□□□□ -0.01
SMIM9-201ENST00000369529 RUSC2Q8N2Y8 1516 aa14.99□□□□□ -0.01
SMIM9-201ENST00000369529 SOGA1O94964 1423 aa14.99□□□□□ -0.01
SMIM9-201ENST00000369529 CUX1P39880 1505 aa14.97□□□□□ -0.01
SMIM9-201ENST00000369529 AKT1S1Q96B36 256 aa14.96□□□□□ -0.01
SMIM9-201ENST00000369529 LAMC3Q9Y6N6 1575 aa14.93□□□□□ -0.02
SMIM9-201ENST00000369529 KIF21AQ7Z4S6 1674 aa14.92□□□□□ -0.02
SMIM9-201ENST00000369529 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
SMIM9-201ENST00000369529 REM2Q8IYK8 340 aaPredicted RBP14.86□□□□□ -0.03
SMIM9-201ENST00000369529 PIP4P2Q8N4L2 257 aa14.86□□□□□ -0.03
SMIM9-201ENST00000369529 ATF5Q9Y2D1 282 aaPredicted RBP14.86□□□□□ -0.03
SMIM9-201ENST00000369529 EEA1Q15075 1411 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms