RNA–Protein interactions for RNA: ENST00000369232.2

USP45-203, Transcript of ubiquitin specific peptidase 45, humanhuman

TSL 5

Gene USP45, Length 782 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP45-203ENST00000369232 AEBP2Q6ZN18 517 aaPredicted RBP25.8■■□□□ 1.72
USP45-203ENST00000369232 CHIC1Q5VXU3 224 aa24.29■■□□□ 1.48
USP45-203ENST00000369232 SENP3Q9H4L4 574 aaPredicted RBP22.13■■□□□ 1.13
USP45-203ENST00000369232 PHF23Q9BUL5 403 aaPredicted RBP21.76■■□□□ 1.07
USP45-203ENST00000369232 FOXD1Q16676 465 aa20.6■□□□□ 0.89
USP45-203ENST00000369232 PLPPR3Q6T4P5 718 aa19.5■□□□□ 0.71
USP45-203ENST00000369232 MSH5O43196 834 aa19.45■□□□□ 0.7
USP45-203ENST00000369232 POTEDQ86YR6 584 aa19.37■□□□□ 0.69
USP45-203ENST00000369232 PIAS4Q8N2W9 510 aaPredicted RBP19.22■□□□□ 0.67
USP45-203ENST00000369232 PPP6R1Q9UPN7 881 aa19.03■□□□□ 0.64
USP45-203ENST00000369232 ADRA2BP18089 450 aa18.96■□□□□ 0.63
USP45-203ENST00000369232 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
USP45-203ENST00000369232 NISCHQ9Y2I1 1504 aa17.98■□□□□ 0.47
USP45-203ENST00000369232 ABCC9O60706 1549 aa17.95■□□□□ 0.46
USP45-203ENST00000369232 DNAJC5Q9H3Z4 198 aa17.74■□□□□ 0.43
USP45-203ENST00000369232 MAPK8IP2Q13387 824 aaPredicted RBP17.48■□□□□ 0.39
USP45-203ENST00000369232 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
USP45-203ENST00000369232 SCAF1Q9H7N4 1312 aaKnown RBP17.45■□□□□ 0.38
USP45-203ENST00000369232 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
USP45-203ENST00000369232 CACNB1Q02641 598 aaPredicted RBP16.82■□□□□ 0.28
USP45-203ENST00000369232 DCAF8L1A6NGE4 600 aa16.76■□□□□ 0.27
USP45-203ENST00000369232 HOXD11P31277 338 aaPredicted RBP16.75■□□□□ 0.27
USP45-203ENST00000369232 NCBP3Q53F19 620 aaKnown RBP16.72■□□□□ 0.27
USP45-203ENST00000369232 CNKSR2Q8WXI2 1034 aa16.71■□□□□ 0.27
USP45-203ENST00000369232 PABPN1Q86U42 306 aaKnown RBP eCLIP16.65■□□□□ 0.26
USP45-203ENST00000369232 RNF216Q9NWF9 866 aaPredicted RBP16.56■□□□□ 0.24
USP45-203ENST00000369232 RNF39Q9H2S5 420 aa16.53■□□□□ 0.24
USP45-203ENST00000369232 CCDC180Q9P1Z9 1646 aa16.52■□□□□ 0.23
USP45-203ENST00000369232 RB1CC1Q8TDY2 1594 aa16.49■□□□□ 0.23
USP45-203ENST00000369232 KCNA4P22459 653 aa16.48■□□□□ 0.23
USP45-203ENST00000369232 CECR2Q9BXF3 1484 aa16.37■□□□□ 0.21
USP45-203ENST00000369232 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
USP45-203ENST00000369232 C1QBPQ07021 282 aaKnown RBP16.32■□□□□ 0.2
USP45-203ENST00000369232 TRIM41Q8WV44 630 aa16.31■□□□□ 0.2
USP45-203ENST00000369232 NACADO15069 1562 aa16.1■□□□□ 0.17
USP45-203ENST00000369232 CUX2O14529 1486 aa16.09■□□□□ 0.17
USP45-203ENST00000369232 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.16
USP45-203ENST00000369232 BICRAQ9NZM4 1560 aa16■□□□□ 0.15
USP45-203ENST00000369232 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.95■□□□□ 0.14
USP45-203ENST00000369232 DCAF8L2P0C7V8 631 aa15.93■□□□□ 0.14
USP45-203ENST00000369232 SHROOM4Q9ULL8 1493 aa15.8■□□□□ 0.12
USP45-203ENST00000369232 UNC13AQ9UPW8 1703 aa15.8■□□□□ 0.12
USP45-203ENST00000369232 EIF4G1Q04637 1599 aaKnown RBP15.75■□□□□ 0.11
USP45-203ENST00000369232 SLC4A1APQ9BWU0 796 aaKnown RBP15.73■□□□□ 0.11
USP45-203ENST00000369232 ERCC6Q03468 1493 aa15.65■□□□□ 0.1
USP45-203ENST00000369232 U3KPZ7 1027 aaPredicted RBP15.56■□□□□ 0.08
USP45-203ENST00000369232 MYO15BQ96JP2 1530 aa15.53■□□□□ 0.08
USP45-203ENST00000369232 SLC4A2P04920 1241 aa15.44■□□□□ 0.06
USP45-203ENST00000369232 CAPN15O75808 1086 aa15.42■□□□□ 0.06
USP45-203ENST00000369232 SPINK5Q9NQ38 1064 aaPredicted RBP15.4■□□□□ 0.06
USP45-203ENST00000369232 DSG3P32926 999 aa15.39■□□□□ 0.05
USP45-203ENST00000369232 ILDR1Q86SU0 546 aaPredicted RBP15.36■□□□□ 0.05
USP45-203ENST00000369232 OSCARQ8IYS5 282 aa15.32■□□□□ 0.04
USP45-203ENST00000369232 FOXD4L1Q9NU39 408 aa15.27■□□□□ 0.04
USP45-203ENST00000369232 TRHP20396 242 aaPredicted RBP15.24■□□□□ 0.03
USP45-203ENST00000369232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.2■□□□□ 0.02
USP45-203ENST00000369232 APLP2Q06481 763 aa15.2■□□□□ 0.02
USP45-203ENST00000369232 HNRNPUL2Q1KMD3 747 aaKnown RBP15.2■□□□□ 0.02
USP45-203ENST00000369232 MYCNP04198 464 aaPredicted RBP15.16■□□□□ 0.02
USP45-203ENST00000369232 SCRIBQ14160 1630 aa15.15■□□□□ 0.02
USP45-203ENST00000369232 POTEHQ6S545 545 aa15.15■□□□□ 0.02
USP45-203ENST00000369232 SAMD1Q6SPF0 538 aaPredicted RBP15.11■□□□□ 0.01
USP45-203ENST00000369232 ZNF219Q9P2Y4 722 aaPredicted RBP15.11■□□□□ 0.01
USP45-203ENST00000369232 ZBTB22O15209 634 aa15.1■□□□□ 0.01
USP45-203ENST00000369232 EHMT2Q96KQ7 1210 aa15.05■□□□□ -0
USP45-203ENST00000369232 NESP48681 1621 aa15.02□□□□□ -0.01
USP45-203ENST00000369232 ABCB7O75027 752 aa15.01□□□□□ -0.01
USP45-203ENST00000369232 THOC2Q8NI27 1593 aaKnown RBP15.01□□□□□ -0.01
USP45-203ENST00000369232 NCAPD3P42695 1498 aa15□□□□□ -0.01
USP45-203ENST00000369232 CYB5RLQ6IPT4 315 aa14.99□□□□□ -0.01
USP45-203ENST00000369232 RIMBP3CA6NJZ7 1639 aa14.91□□□□□ -0.02
USP45-203ENST00000369232 RIMBP3BA6NNM3 1639 aa14.91□□□□□ -0.02
USP45-203ENST00000369232 RIMBP3Q9UFD9 1639 aa14.91□□□□□ -0.02
USP45-203ENST00000369232 CSRNP3Q8WYN3 585 aa14.9□□□□□ -0.02
USP45-203ENST00000369232 BAZ1AQ9NRL2 1556 aaPredicted RBP14.89□□□□□ -0.03
USP45-203ENST00000369232 PDS5BQ9NTI5 1447 aa14.84□□□□□ -0.03
USP45-203ENST00000369232 ARHGEF11O15085 1522 aa14.82□□□□□ -0.04
USP45-203ENST00000369232 SMARCA2P51531 1590 aa14.81□□□□□ -0.04
USP45-203ENST00000369232 DCAF1Q9Y4B6 1507 aa14.81□□□□□ -0.04
USP45-203ENST00000369232 ATXN8OSP0DMR3 200 aa14.78□□□□□ -0.04
USP45-203ENST00000369232 RBM42Q9BTD8 480 aaKnown RBP14.75□□□□□ -0.05
USP45-203ENST00000369232 LAMC3Q9Y6N6 1575 aa14.71□□□□□ -0.05
USP45-203ENST00000369232 ATAD2BQ9ULI0 1458 aa14.69□□□□□ -0.06
USP45-203ENST00000369232 ATF5Q9Y2D1 282 aaPredicted RBP14.67□□□□□ -0.06
USP45-203ENST00000369232 MRC2Q9UBG0 1479 aa14.67□□□□□ -0.06
USP45-203ENST00000369232 POLA2Q14181 598 aa14.64□□□□□ -0.07
USP45-203ENST00000369232 WDR62O43379 1518 aa14.61□□□□□ -0.07
USP45-203ENST00000369232 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
USP45-203ENST00000369232 ARAP1Q96P48 1450 aa14.58□□□□□ -0.08
USP45-203ENST00000369232 KIF21AQ7Z4S6 1674 aa14.57□□□□□ -0.08
USP45-203ENST00000369232 ZCCHC6Q5VYS8 1495 aaKnown RBP14.57□□□□□ -0.08
USP45-203ENST00000369232 FBXO41Q8TF61 875 aa14.52□□□□□ -0.09
USP45-203ENST00000369232 CADPSQ9ULU8 1353 aa14.5□□□□□ -0.09
USP45-203ENST00000369232 SOCS7O14512 581 aa14.5□□□□□ -0.09
USP45-203ENST00000369232 CHRDL2Q6WN34 429 aa14.48□□□□□ -0.09
USP45-203ENST00000369232 KDM4FA0A1W2PPD8 638 aa14.47□□□□□ -0.09
USP45-203ENST00000369232 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
USP45-203ENST00000369232 LMTK3Q96Q04 1460 aa14.44□□□□□ -0.1
USP45-203ENST00000369232 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
USP45-203ENST00000369232 ZBTB12Q9Y330 459 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms