RNA–Protein interactions for RNA: ENST00000368813.1

EDRF1-204, Transcript of erythroid differentiation regulatory factor 1, humanhuman

TSL 2

Gene EDRF1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDRF1-204ENST00000368813 AEBP2Q6ZN18 517 aaPredicted RBP27.84■■■□□ 2.05
EDRF1-204ENST00000368813 CHIC1Q5VXU3 224 aa27.24■■□□□ 1.95
EDRF1-204ENST00000368813 PHF23Q9BUL5 403 aaPredicted RBP24.06■■□□□ 1.44
EDRF1-204ENST00000368813 SENP3Q9H4L4 574 aaPredicted RBP23.44■■□□□ 1.34
EDRF1-204ENST00000368813 NISCHQ9Y2I1 1504 aa22.13■■□□□ 1.13
EDRF1-204ENST00000368813 PLPPR3Q6T4P5 718 aa22.13■■□□□ 1.13
EDRF1-204ENST00000368813 FOXD1Q16676 465 aa21.83■■□□□ 1.09
EDRF1-204ENST00000368813 PPP6R1Q9UPN7 881 aa21.19■□□□□ 0.98
EDRF1-204ENST00000368813 ADRA2BP18089 450 aa21.15■□□□□ 0.98
EDRF1-204ENST00000368813 PIAS4Q8N2W9 510 aaPredicted RBP20.59■□□□□ 0.89
EDRF1-204ENST00000368813 MSH5O43196 834 aa20.48■□□□□ 0.87
EDRF1-204ENST00000368813 POTEDQ86YR6 584 aa20.36■□□□□ 0.85
EDRF1-204ENST00000368813 CCDC180Q9P1Z9 1646 aa19.95■□□□□ 0.78
EDRF1-204ENST00000368813 ABCC9O60706 1549 aa19.85■□□□□ 0.77
EDRF1-204ENST00000368813 PPP4R3CPQ6ZMV5 832 aa19.57■□□□□ 0.72
EDRF1-204ENST00000368813 KCNA4P22459 653 aa19.37■□□□□ 0.69
EDRF1-204ENST00000368813 MAPK8IP2Q13387 824 aaPredicted RBP19.16■□□□□ 0.66
EDRF1-204ENST00000368813 SCAF1Q9H7N4 1312 aaKnown RBP19.14■□□□□ 0.65
EDRF1-204ENST00000368813 NCBP3Q53F19 620 aaKnown RBP18.98■□□□□ 0.63
EDRF1-204ENST00000368813 RB1CC1Q8TDY2 1594 aa18.98■□□□□ 0.63
EDRF1-204ENST00000368813 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
EDRF1-204ENST00000368813 NPM3O75607 178 aaKnown RBP18.86■□□□□ 0.61
EDRF1-204ENST00000368813 NACADO15069 1562 aa18.85■□□□□ 0.61
EDRF1-204ENST00000368813 DMRT2Q9Y5R5 561 aa18.78■□□□□ 0.6
EDRF1-204ENST00000368813 MYO15BQ96JP2 1530 aa18.64■□□□□ 0.58
EDRF1-204ENST00000368813 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
EDRF1-204ENST00000368813 RNF216Q9NWF9 866 aaPredicted RBP18.54■□□□□ 0.56
EDRF1-204ENST00000368813 DCAF8L2P0C7V8 631 aa18.51■□□□□ 0.55
EDRF1-204ENST00000368813 UNC13AQ9UPW8 1703 aa18.47■□□□□ 0.55
EDRF1-204ENST00000368813 HOXD11P31277 338 aaPredicted RBP18.45■□□□□ 0.54
EDRF1-204ENST00000368813 PABPN1Q86U42 306 aaKnown RBP eCLIP18.41■□□□□ 0.54
EDRF1-204ENST00000368813 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
EDRF1-204ENST00000368813 BICRAQ9NZM4 1560 aa18.38■□□□□ 0.53
EDRF1-204ENST00000368813 DCAF1Q9Y4B6 1507 aa18.37■□□□□ 0.53
EDRF1-204ENST00000368813 ZCCHC6Q5VYS8 1495 aaKnown RBP18.36■□□□□ 0.53
EDRF1-204ENST00000368813 SHROOM4Q9ULL8 1493 aa18.3■□□□□ 0.52
EDRF1-204ENST00000368813 EHMT2Q96KQ7 1210 aa18.14■□□□□ 0.49
EDRF1-204ENST00000368813 SCRIBQ14160 1630 aa18.06■□□□□ 0.48
EDRF1-204ENST00000368813 CC2D2AQ9P2K1 1620 aa17.98■□□□□ 0.47
EDRF1-204ENST00000368813 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.46
EDRF1-204ENST00000368813 DCAF8L1A6NGE4 600 aa17.94■□□□□ 0.46
EDRF1-204ENST00000368813 CECR2Q9BXF3 1484 aa17.94■□□□□ 0.46
EDRF1-204ENST00000368813 ZBTB22O15209 634 aa17.9■□□□□ 0.46
EDRF1-204ENST00000368813 CSRNP3Q8WYN3 585 aa17.85■□□□□ 0.45
EDRF1-204ENST00000368813 SLC4A2P04920 1241 aa17.81■□□□□ 0.44
EDRF1-204ENST00000368813 FOXD4L1Q9NU39 408 aa17.71■□□□□ 0.43
EDRF1-204ENST00000368813 CACNB1Q02641 598 aaPredicted RBP17.69■□□□□ 0.42
EDRF1-204ENST00000368813 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.53■□□□□ 0.4
EDRF1-204ENST00000368813 RNF39Q9H2S5 420 aa17.39■□□□□ 0.37
EDRF1-204ENST00000368813 NCAPD3P42695 1498 aa17.38■□□□□ 0.37
EDRF1-204ENST00000368813 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
EDRF1-204ENST00000368813 MYCNP04198 464 aaPredicted RBP17.35■□□□□ 0.37
EDRF1-204ENST00000368813 SMARCA2P51531 1590 aa17.3■□□□□ 0.36
EDRF1-204ENST00000368813 HMGXB3Q12766 1538 aa17.3■□□□□ 0.36
EDRF1-204ENST00000368813 ATAD2BQ9ULI0 1458 aa17.3■□□□□ 0.36
EDRF1-204ENST00000368813 SMARCA4P51532 1647 aa17.28■□□□□ 0.36
EDRF1-204ENST00000368813 CUX2O14529 1486 aa17.25■□□□□ 0.35
EDRF1-204ENST00000368813 BAZ1AQ9NRL2 1556 aaPredicted RBP17.21■□□□□ 0.35
EDRF1-204ENST00000368813 ERCC6Q03468 1493 aa17.19■□□□□ 0.34
EDRF1-204ENST00000368813 DNAJC5Q9H3Z4 198 aa17.19■□□□□ 0.34
EDRF1-204ENST00000368813 C1QBPQ07021 282 aaKnown RBP17.18■□□□□ 0.34
EDRF1-204ENST00000368813 PEG3Q9GZU2 1588 aa17.17■□□□□ 0.34
EDRF1-204ENST00000368813 BAZ1BQ9UIG0 1483 aaKnown RBP17.13■□□□□ 0.33
EDRF1-204ENST00000368813 NESP48681 1621 aa17.03■□□□□ 0.32
EDRF1-204ENST00000368813 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.02■□□□□ 0.32
EDRF1-204ENST00000368813 HNRNPUL2Q1KMD3 747 aaKnown RBP17.02■□□□□ 0.32
EDRF1-204ENST00000368813 SAMD1Q6SPF0 538 aaPredicted RBP17.02■□□□□ 0.32
EDRF1-204ENST00000368813 ATF5Q9Y2D1 282 aaPredicted RBP17.02■□□□□ 0.32
EDRF1-204ENST00000368813 LAMC3Q9Y6N6 1575 aa17.02■□□□□ 0.31
EDRF1-204ENST00000368813 MROH2BQ7Z745 1585 aa17.01■□□□□ 0.31
EDRF1-204ENST00000368813 ATXN8OSP0DMR3 200 aa16.99■□□□□ 0.31
EDRF1-204ENST00000368813 THOC2Q8NI27 1593 aaKnown RBP16.96■□□□□ 0.31
EDRF1-204ENST00000368813 PDS5BQ9NTI5 1447 aa16.9■□□□□ 0.3
EDRF1-204ENST00000368813 SPINK5Q9NQ38 1064 aaPredicted RBP16.86■□□□□ 0.29
EDRF1-204ENST00000368813 KIF21AQ7Z4S6 1674 aa16.85■□□□□ 0.29
EDRF1-204ENST00000368813 CADPSQ9ULU8 1353 aa16.82■□□□□ 0.28
EDRF1-204ENST00000368813 WIZO95785 1651 aa16.78■□□□□ 0.28
EDRF1-204ENST00000368813 MRC2Q9UBG0 1479 aa16.76■□□□□ 0.27
EDRF1-204ENST00000368813 APLP2Q06481 763 aa16.76■□□□□ 0.27
EDRF1-204ENST00000368813 WDR62O43379 1518 aa16.74■□□□□ 0.27
EDRF1-204ENST00000368813 CAPN15O75808 1086 aa16.69■□□□□ 0.26
EDRF1-204ENST00000368813 CEP164Q9UPV0 1460 aa16.67■□□□□ 0.26
EDRF1-204ENST00000368813 TRHP20396 242 aaPredicted RBP16.67■□□□□ 0.26
EDRF1-204ENST00000368813 RSF1Q96T23 1441 aaPredicted RBP16.65■□□□□ 0.26
EDRF1-204ENST00000368813 CFTRP13569 1480 aa16.65■□□□□ 0.26
EDRF1-204ENST00000368813 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
EDRF1-204ENST00000368813 FANCD2Q9BXW9 1451 aa16.63■□□□□ 0.25
EDRF1-204ENST00000368813 ZNF219Q9P2Y4 722 aaPredicted RBP16.62■□□□□ 0.25
EDRF1-204ENST00000368813 PRDM2Q13029 1718 aa16.49■□□□□ 0.23
EDRF1-204ENST00000368813 URB2Q14146 1524 aaKnown RBP16.48■□□□□ 0.23
EDRF1-204ENST00000368813 ABCB7O75027 752 aa16.47■□□□□ 0.23
EDRF1-204ENST00000368813 POLA2Q14181 598 aa16.44■□□□□ 0.22
EDRF1-204ENST00000368813 DSG3P32926 999 aa16.42■□□□□ 0.22
EDRF1-204ENST00000368813 CCDC88BA6NC98 1476 aa16.4■□□□□ 0.22
EDRF1-204ENST00000368813 IFT140Q96RY7 1462 aa16.35■□□□□ 0.21
EDRF1-204ENST00000368813 OSCARQ8IYS5 282 aa16.35■□□□□ 0.21
EDRF1-204ENST00000368813 TRIM41Q8WV44 630 aa16.33■□□□□ 0.2
EDRF1-204ENST00000368813 ABCC8Q09428 1581 aa16.33■□□□□ 0.2
EDRF1-204ENST00000368813 TOPBP1Q92547 1522 aa16.31■□□□□ 0.2
EDRF1-204ENST00000368813 DNMBPQ6XZF7 1577 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms