RNA–Protein interactions for RNA: ENST00000367525.3

UTRN-202, Transcript of utrophin, humanhuman

TSL 3

Gene UTRN, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UTRN-202ENST00000367525 AEBP2Q6ZN18 517 aaPredicted RBP19.04■□□□□ 0.64
UTRN-202ENST00000367525 CHIC1Q5VXU3 224 aa18.75■□□□□ 0.59
UTRN-202ENST00000367525 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
UTRN-202ENST00000367525 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
UTRN-202ENST00000367525 SENP3Q9H4L4 574 aaPredicted RBP16.11■□□□□ 0.17
UTRN-202ENST00000367525 PLPPR3Q6T4P5 718 aa15.29■□□□□ 0.04
UTRN-202ENST00000367525 FOXD1Q16676 465 aa14.95□□□□□ -0.02
UTRN-202ENST00000367525 ADRA2BP18089 450 aa14.53□□□□□ -0.08
UTRN-202ENST00000367525 PPP6R1Q9UPN7 881 aa14.53□□□□□ -0.08
UTRN-202ENST00000367525 CCDC180Q9P1Z9 1646 aa14.23□□□□□ -0.13
UTRN-202ENST00000367525 PIAS4Q8N2W9 510 aaPredicted RBP14.14□□□□□ -0.15
UTRN-202ENST00000367525 MSH5O43196 834 aa13.69□□□□□ -0.22
UTRN-202ENST00000367525 ZCCHC6Q5VYS8 1495 aaKnown RBP13.58□□□□□ -0.24
UTRN-202ENST00000367525 ABCC9O60706 1549 aa13.54□□□□□ -0.24
UTRN-202ENST00000367525 DCAF8L2P0C7V8 631 aa13.52□□□□□ -0.25
UTRN-202ENST00000367525 PPP4R3CPQ6ZMV5 832 aa13.51□□□□□ -0.25
UTRN-202ENST00000367525 DCAF1Q9Y4B6 1507 aa13.49□□□□□ -0.25
UTRN-202ENST00000367525 MYO15BQ96JP2 1530 aa13.41□□□□□ -0.26
UTRN-202ENST00000367525 KCNA4P22459 653 aa13.4□□□□□ -0.26
UTRN-202ENST00000367525 NACADO15069 1562 aa13.34□□□□□ -0.27
UTRN-202ENST00000367525 SCAF1Q9H7N4 1312 aaKnown RBP13.27□□□□□ -0.29
UTRN-202ENST00000367525 RB1CC1Q8TDY2 1594 aa13.24□□□□□ -0.29
UTRN-202ENST00000367525 NCBP3Q53F19 620 aaKnown RBP13.2□□□□□ -0.3
UTRN-202ENST00000367525 MAPK8IP2Q13387 824 aaPredicted RBP13.14□□□□□ -0.31
UTRN-202ENST00000367525 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
UTRN-202ENST00000367525 SHROOM4Q9ULL8 1493 aa13.07□□□□□ -0.32
UTRN-202ENST00000367525 NPM3O75607 178 aaKnown RBP13.01□□□□□ -0.33
UTRN-202ENST00000367525 SCRIBQ14160 1630 aa12.99□□□□□ -0.33
UTRN-202ENST00000367525 DMRT2Q9Y5R5 561 aa12.88□□□□□ -0.35
UTRN-202ENST00000367525 UNC13AQ9UPW8 1703 aa12.8□□□□□ -0.36
UTRN-202ENST00000367525 SLC4A1APQ9BWU0 796 aaKnown RBP12.8□□□□□ -0.36
UTRN-202ENST00000367525 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
UTRN-202ENST00000367525 RNF216Q9NWF9 866 aaPredicted RBP12.77□□□□□ -0.37
UTRN-202ENST00000367525 BICRAQ9NZM4 1560 aa12.75□□□□□ -0.37
UTRN-202ENST00000367525 HOXD11P31277 338 aaPredicted RBP12.68□□□□□ -0.38
UTRN-202ENST00000367525 EHMT2Q96KQ7 1210 aa12.64□□□□□ -0.39
UTRN-202ENST00000367525 SUPT5HO00267 1087 aaKnown RBP12.58□□□□□ -0.4
UTRN-202ENST00000367525 BAZ1AQ9NRL2 1556 aaPredicted RBP12.58□□□□□ -0.4
UTRN-202ENST00000367525 DNAJC5BQ9UF47 199 aa12.57□□□□□ -0.4
UTRN-202ENST00000367525 CECR2Q9BXF3 1484 aa12.57□□□□□ -0.4
UTRN-202ENST00000367525 RSF1Q96T23 1441 aaPredicted RBP12.54□□□□□ -0.4
UTRN-202ENST00000367525 MROH2BQ7Z745 1585 aa12.49□□□□□ -0.41
UTRN-202ENST00000367525 SMARCA4P51532 1647 aa12.48□□□□□ -0.41
UTRN-202ENST00000367525 EIF4G1Q04637 1599 aaKnown RBP12.42□□□□□ -0.42
UTRN-202ENST00000367525 CSRNP3Q8WYN3 585 aa12.4□□□□□ -0.42
UTRN-202ENST00000367525 SMARCA2P51531 1590 aa12.38□□□□□ -0.43
UTRN-202ENST00000367525 PEG3Q9GZU2 1588 aa12.37□□□□□ -0.43
UTRN-202ENST00000367525 ATAD2BQ9ULI0 1458 aa12.35□□□□□ -0.43
UTRN-202ENST00000367525 DCAF8L1A6NGE4 600 aa12.35□□□□□ -0.43
UTRN-202ENST00000367525 WIZO95785 1651 aa12.35□□□□□ -0.43
UTRN-202ENST00000367525 ZBTB22O15209 634 aa12.34□□□□□ -0.43
UTRN-202ENST00000367525 NCAPD3P42695 1498 aa12.33□□□□□ -0.44
UTRN-202ENST00000367525 BAZ1BQ9UIG0 1483 aaKnown RBP12.29□□□□□ -0.44
UTRN-202ENST00000367525 TOP2AP11388 1531 aaKnown RBP12.28□□□□□ -0.44
UTRN-202ENST00000367525 FOXD4L1Q9NU39 408 aa12.27□□□□□ -0.45
UTRN-202ENST00000367525 CC2D2AQ9P2K1 1620 aa12.26□□□□□ -0.45
UTRN-202ENST00000367525 SLC4A2P04920 1241 aa12.25□□□□□ -0.45
UTRN-202ENST00000367525 HMGXB3Q12766 1538 aa12.25□□□□□ -0.45
UTRN-202ENST00000367525 POTEDQ86YR6 584 aa12.19□□□□□ -0.46
UTRN-202ENST00000367525 CCDC88BA6NC98 1476 aa12.16□□□□□ -0.46
UTRN-202ENST00000367525 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.11□□□□□ -0.473e-10■□□□□ 9.4
UTRN-202ENST00000367525 MYCNP04198 464 aaPredicted RBP12.01□□□□□ -0.49
UTRN-202ENST00000367525 CADPSQ9ULU8 1353 aa12.01□□□□□ -0.49
UTRN-202ENST00000367525 CFTRP13569 1480 aa11.98□□□□□ -0.49
UTRN-202ENST00000367525 TRIM41Q8WV44 630 aa11.93□□□□□ -0.5
UTRN-202ENST00000367525 U3KPZ7 1027 aaPredicted RBP11.92□□□□□ -0.5
UTRN-202ENST00000367525 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
UTRN-202ENST00000367525 PDS5BQ9NTI5 1447 aa11.88□□□□□ -0.51
UTRN-202ENST00000367525 WRNQ14191 1432 aaPredicted RBP eCLIP11.84□□□□□ -0.51
UTRN-202ENST00000367525 ATXN8OSP0DMR3 200 aa11.82□□□□□ -0.52
UTRN-202ENST00000367525 FANCD2Q9BXW9 1451 aa11.82□□□□□ -0.52
UTRN-202ENST00000367525 PRDM2Q13029 1718 aa11.81□□□□□ -0.52
UTRN-202ENST00000367525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.81□□□□□ -0.52
UTRN-202ENST00000367525 HNRNPUL2Q1KMD3 747 aaKnown RBP11.81□□□□□ -0.52
UTRN-202ENST00000367525 NESP48681 1621 aa11.81□□□□□ -0.52
UTRN-202ENST00000367525 SAMD1Q6SPF0 538 aaPredicted RBP11.79□□□□□ -0.52
UTRN-202ENST00000367525 ABCC8Q09428 1581 aa11.78□□□□□ -0.52
UTRN-202ENST00000367525 CEP164Q9UPV0 1460 aa11.77□□□□□ -0.52
UTRN-202ENST00000367525 RNF39Q9H2S5 420 aa11.76□□□□□ -0.53
UTRN-202ENST00000367525 TOP2BQ02880 1626 aa11.71□□□□□ -0.53
UTRN-202ENST00000367525 ATF5Q9Y2D1 282 aaPredicted RBP11.7□□□□□ -0.54
UTRN-202ENST00000367525 CUX1P39880 1505 aa11.7□□□□□ -0.54
UTRN-202ENST00000367525 ERCC6Q03468 1493 aa11.7□□□□□ -0.54
UTRN-202ENST00000367525 SYNJ1O43426 1573 aa11.69□□□□□ -0.54
UTRN-202ENST00000367525 BIVM-ERCC5R4GMW8 1640 aa11.68□□□□□ -0.54
UTRN-202ENST00000367525 DNMBPQ6XZF7 1577 aa11.67□□□□□ -0.54
UTRN-202ENST00000367525 EEA1Q15075 1411 aa11.67□□□□□ -0.54
UTRN-202ENST00000367525 MRC2Q9UBG0 1479 aa11.66□□□□□ -0.54
UTRN-202ENST00000367525 TOPBP1Q92547 1522 aa11.65□□□□□ -0.54
UTRN-202ENST00000367525 APLP2Q06481 763 aa11.65□□□□□ -0.54
UTRN-202ENST00000367525 KIF21AQ7Z4S6 1674 aa11.64□□□□□ -0.55
UTRN-202ENST00000367525 URB2Q14146 1524 aaKnown RBP11.63□□□□□ -0.55
UTRN-202ENST00000367525 C1QBPQ07021 282 aaKnown RBP11.62□□□□□ -0.55
UTRN-202ENST00000367525 FGD5Q6ZNL6 1462 aa11.61□□□□□ -0.55
UTRN-202ENST00000367525 SOGA1O94964 1423 aa11.6□□□□□ -0.55
UTRN-202ENST00000367525 FAM9AQ8IZU1 332 aaPredicted RBP11.6□□□□□ -0.55
UTRN-202ENST00000367525 KIF27Q86VH2 1401 aa11.6□□□□□ -0.55
UTRN-202ENST00000367525 WDR62O43379 1518 aa11.58□□□□□ -0.56
UTRN-202ENST00000367525 POLA1P09884 1462 aaPredicted RBP11.57□□□□□ -0.56
UTRN-202ENST00000367525 SPINK5Q9NQ38 1064 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms