RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 NISCHQ9Y2I1 1504 aa19.44■□□□□ 0.7
TRAPPC2-201ENST00000359680 SHROOM4Q9ULL8 1493 aa16.93■□□□□ 0.3
TRAPPC2-201ENST00000359680 SUPT5HO00267 1087 aaKnown RBP16.79■□□□□ 0.28
TRAPPC2-201ENST00000359680 CHIC1Q5VXU3 224 aa16.76■□□□□ 0.27
TRAPPC2-201ENST00000359680 AEBP2Q6ZN18 517 aaPredicted RBP16.62■□□□□ 0.25
TRAPPC2-201ENST00000359680 HRCP23327 699 aa16.62■□□□□ 0.25
TRAPPC2-201ENST00000359680 ZCCHC6Q5VYS8 1495 aaKnown RBP16.51■□□□□ 0.23
TRAPPC2-201ENST00000359680 MYO15BQ96JP2 1530 aa16.48■□□□□ 0.23
TRAPPC2-201ENST00000359680 PCGF6Q9BYE7 350 aa16.38■□□□□ 0.21
TRAPPC2-201ENST00000359680 CCDC180Q9P1Z9 1646 aa16.35■□□□□ 0.21
TRAPPC2-201ENST00000359680 PPARGC1BQ86YN6 1023 aaKnown RBP16.21■□□□□ 0.19
TRAPPC2-201ENST00000359680 DCAF1Q9Y4B6 1507 aa16.17■□□□□ 0.18
TRAPPC2-201ENST00000359680 DCAF8L2P0C7V8 631 aa16.12■□□□□ 0.17
TRAPPC2-201ENST00000359680 LOC105371045A0A1W2PR82 267 aa16■□□□□ 0.15
TRAPPC2-201ENST00000359680 TRIM26Q12899 539 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC2-201ENST00000359680 ZEB1P37275 1124 aaPredicted RBP15.81■□□□□ 0.12
TRAPPC2-201ENST00000359680 PELP1Q8IZL8 1130 aaKnown RBP15.77■□□□□ 0.11
TRAPPC2-201ENST00000359680 ABCC9O60706 1549 aa15.67■□□□□ 0.1
TRAPPC2-201ENST00000359680 TRIM41Q8WV44 630 aa15.6■□□□□ 0.09
TRAPPC2-201ENST00000359680 SCAF1Q9H7N4 1312 aaKnown RBP15.55■□□□□ 0.08
TRAPPC2-201ENST00000359680 RSF1Q96T23 1441 aaPredicted RBP15.53■□□□□ 0.08
TRAPPC2-201ENST00000359680 FAM9AQ8IZU1 332 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC2-201ENST00000359680 RB1CC1Q8TDY2 1594 aa15.45■□□□□ 0.06
TRAPPC2-201ENST00000359680 SCRIBQ14160 1630 aa15.44■□□□□ 0.06
TRAPPC2-201ENST00000359680 EHMT2Q96KQ7 1210 aa15.39■□□□□ 0.05
TRAPPC2-201ENST00000359680 ACIN1Q9UKV3 1341 aaKnown RBP15.29■□□□□ 0.04
TRAPPC2-201ENST00000359680 CCER1Q8TC90 406 aaPredicted RBP15.28■□□□□ 0.04
TRAPPC2-201ENST00000359680 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.26■□□□□ 0.03
TRAPPC2-201ENST00000359680 NEUROD1Q13562 356 aa15.22■□□□□ 0.03
TRAPPC2-201ENST00000359680 CENPBP07199 599 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC2-201ENST00000359680 DIEXFQ68CQ4 756 aaKnown RBP15.17■□□□□ 0.02
TRAPPC2-201ENST00000359680 CECR2Q9BXF3 1484 aa15.14■□□□□ 0.01
TRAPPC2-201ENST00000359680 GTF3C3Q9Y5Q9 886 aa15.14■□□□□ 0.01
TRAPPC2-201ENST00000359680 MROH2BQ7Z745 1585 aa15.14■□□□□ 0.01
TRAPPC2-201ENST00000359680 MYT1Q01538 1121 aa15.11■□□□□ 0.01
TRAPPC2-201ENST00000359680 WIZO95785 1651 aa15.1■□□□□ 0.01
TRAPPC2-201ENST00000359680 PHF23Q9BUL5 403 aaPredicted RBP15.08■□□□□ 0
TRAPPC2-201ENST00000359680 NACADO15069 1562 aa15.03■□□□□ -0
TRAPPC2-201ENST00000359680 BAZ1AQ9NRL2 1556 aaPredicted RBP15.03■□□□□ -0
TRAPPC2-201ENST00000359680 WRNQ14191 1432 aaPredicted RBP eCLIP15.02■□□□□ -0
TRAPPC2-201ENST00000359680 EIF4G1Q04637 1599 aaKnown RBP15.01□□□□□ -0.01
TRAPPC2-201ENST00000359680 TTBK1Q5TCY1 1321 aaPredicted RBP15□□□□□ -0.01
TRAPPC2-201ENST00000359680 CEP162Q5TB80 1403 aa14.96□□□□□ -0.01
TRAPPC2-201ENST00000359680 ZNF316A6NFI3 1004 aaPredicted RBP14.95□□□□□ -0.02
TRAPPC2-201ENST00000359680 ABCC8Q09428 1581 aa14.91□□□□□ -0.02
TRAPPC2-201ENST00000359680 CCDC88BA6NC98 1476 aa14.9□□□□□ -0.02
TRAPPC2-201ENST00000359680 TNIKQ9UKE5 1360 aa14.89□□□□□ -0.03
TRAPPC2-201ENST00000359680 YTHDC1Q96MU7 727 aaKnown RBP14.86□□□□□ -0.03
TRAPPC2-201ENST00000359680 TOP2AP11388 1531 aaKnown RBP14.85□□□□□ -0.03
TRAPPC2-201ENST00000359680 EEA1Q15075 1411 aa14.83□□□□□ -0.04
TRAPPC2-201ENST00000359680 SOGA1O94964 1423 aa14.83□□□□□ -0.04
TRAPPC2-201ENST00000359680 UBTFP17480 764 aaKnown RBP14.83□□□□□ -0.04
TRAPPC2-201ENST00000359680 CSRNP3Q8WYN3 585 aa14.8□□□□□ -0.04
TRAPPC2-201ENST00000359680 SMARCA2P51531 1590 aa14.78□□□□□ -0.04
TRAPPC2-201ENST00000359680 MIER1Q8N108 512 aa14.77□□□□□ -0.05
TRAPPC2-201ENST00000359680 GOLGA3Q08378 1498 aa14.76□□□□□ -0.05
TRAPPC2-201ENST00000359680 SMARCA4P51532 1647 aa14.74□□□□□ -0.05
TRAPPC2-201ENST00000359680 RUSC2Q8N2Y8 1516 aa14.73□□□□□ -0.05
TRAPPC2-201ENST00000359680 HNRNPUL2Q1KMD3 747 aaKnown RBP14.72□□□□□ -0.05
TRAPPC2-201ENST00000359680 CEP164Q9UPV0 1460 aa14.63□□□□□ -0.07
TRAPPC2-201ENST00000359680 APLP2Q06481 763 aa14.62□□□□□ -0.07
TRAPPC2-201ENST00000359680 CLIP1P30622 1438 aa14.61□□□□□ -0.07
TRAPPC2-201ENST00000359680 KIF21BO75037 1637 aa14.6□□□□□ -0.07
TRAPPC2-201ENST00000359680 VPS8Q8N3P4 1428 aa14.59□□□□□ -0.07
TRAPPC2-201ENST00000359680 CLSPNQ9HAW4 1339 aa14.57□□□□□ -0.08
TRAPPC2-201ENST00000359680 UNC13AQ9UPW8 1703 aa14.52□□□□□ -0.08
TRAPPC2-201ENST00000359680 BAZ1BQ9UIG0 1483 aaKnown RBP14.52□□□□□ -0.09
TRAPPC2-201ENST00000359680 SYNJ1O43426 1573 aa14.51□□□□□ -0.09
TRAPPC2-201ENST00000359680 SUPT16HQ9Y5B9 1047 aaKnown RBP14.48□□□□□ -0.09
TRAPPC2-201ENST00000359680 RAPGEF2Q9Y4G8 1499 aa14.45□□□□□ -0.1
TRAPPC2-201ENST00000359680 RANGAP1P46060 587 aaPredicted RBP14.45□□□□□ -0.1
TRAPPC2-201ENST00000359680 DHX57Q6P158 1386 aaKnown RBP14.44□□□□□ -0.1
TRAPPC2-201ENST00000359680 PEG3Q9GZU2 1588 aa14.4□□□□□ -0.1
TRAPPC2-201ENST00000359680 TSHZ2Q9NRE2 1034 aa14.33□□□□□ -0.12
TRAPPC2-201ENST00000359680 PABPN1Q86U42 306 aaKnown RBP eCLIP14.31□□□□□ -0.12
TRAPPC2-201ENST00000359680 ERICH3Q5RHP9 1530 aa14.3□□□□□ -0.12
TRAPPC2-201ENST00000359680 ARAP1Q96P48 1450 aa14.3□□□□□ -0.12
TRAPPC2-201ENST00000359680 TOP2BQ02880 1626 aa14.3□□□□□ -0.12
TRAPPC2-201ENST00000359680 RRBP1Q9P2E9 1410 aaKnown RBP14.29□□□□□ -0.12
TRAPPC2-201ENST00000359680 KANK4Q5T7N3 995 aaPredicted RBP14.28□□□□□ -0.12
TRAPPC2-201ENST00000359680 ANP32EQ9BTT0 268 aa14.28□□□□□ -0.12
TRAPPC2-201ENST00000359680 BICRAQ9NZM4 1560 aa14.28□□□□□ -0.12
TRAPPC2-201ENST00000359680 ATAD2BQ9ULI0 1458 aa14.26□□□□□ -0.13
TRAPPC2-201ENST00000359680 CUX2O14529 1486 aa14.25□□□□□ -0.13
TRAPPC2-201ENST00000359680 PRXQ9BXM0 1461 aa14.24□□□□□ -0.13
TRAPPC2-201ENST00000359680 BIVM-ERCC5R4GMW8 1640 aa14.23□□□□□ -0.13
TRAPPC2-201ENST00000359680 CCNB3Q8WWL7 1395 aa14.23□□□□□ -0.13
TRAPPC2-201ENST00000359680 ITGAEP38570 1179 aa14.2□□□□□ -0.14
TRAPPC2-201ENST00000359680 KCNH8Q96L42 1107 aa14.19□□□□□ -0.14
TRAPPC2-201ENST00000359680 BCANQ96GW7 911 aa14.18□□□□□ -0.14
TRAPPC2-201ENST00000359680 FKBP8Q14318 412 aa14.16□□□□□ -0.14
TRAPPC2-201ENST00000359680 RAB3GAP2Q9H2M9 1393 aa14.15□□□□□ -0.14
TRAPPC2-201ENST00000359680 MAPKBP1O60336 1514 aa14.13□□□□□ -0.15
TRAPPC2-201ENST00000359680 KIF27Q86VH2 1401 aa14.13□□□□□ -0.15
TRAPPC2-201ENST00000359680 NEFLP07196 543 aa14.13□□□□□ -0.15
TRAPPC2-201ENST00000359680 ARHGAP35Q9NRY4 1499 aa14.12□□□□□ -0.15
TRAPPC2-201ENST00000359680 DDX10Q13206 875 aaKnown RBP14.11□□□□□ -0.15
TRAPPC2-201ENST00000359680 SETD5Q9C0A6 1442 aa14.08□□□□□ -0.15
TRAPPC2-201ENST00000359680 WDR97A6NE52 1622 aa14.07□□□□□ -0.16
TRAPPC2-201ENST00000359680 CUX1P39880 1505 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms