RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 AEBP2Q6ZN18 517 aaPredicted RBP19.53■□□□□ 0.72
CCDC196-201ENST00000359454 CHIC1Q5VXU3 224 aa19.25■□□□□ 0.67
CCDC196-201ENST00000359454 PHF23Q9BUL5 403 aaPredicted RBP16.93■□□□□ 0.3
CCDC196-201ENST00000359454 SENP3Q9H4L4 574 aaPredicted RBP16.57■□□□□ 0.24
CCDC196-201ENST00000359454 NISCHQ9Y2I1 1504 aa16.01■□□□□ 0.15
CCDC196-201ENST00000359454 PLPPR3Q6T4P5 718 aa15.72■□□□□ 0.11
CCDC196-201ENST00000359454 FOXD1Q16676 465 aa15.34■□□□□ 0.05
CCDC196-201ENST00000359454 POTEDQ86YR6 584 aa14.92□□□□□ -0.02
CCDC196-201ENST00000359454 ADRA2BP18089 450 aa14.89□□□□□ -0.03
CCDC196-201ENST00000359454 PPP6R1Q9UPN7 881 aa14.88□□□□□ -0.03
CCDC196-201ENST00000359454 ABCC9O60706 1549 aa14.6□□□□□ -0.07
CCDC196-201ENST00000359454 PIAS4Q8N2W9 510 aaPredicted RBP14.54□□□□□ -0.08
CCDC196-201ENST00000359454 CCDC180Q9P1Z9 1646 aa14.44□□□□□ -0.1
CCDC196-201ENST00000359454 MSH5O43196 834 aa14.1□□□□□ -0.15
CCDC196-201ENST00000359454 PPP4R3CPQ6ZMV5 832 aa13.87□□□□□ -0.19
CCDC196-201ENST00000359454 RB1CC1Q8TDY2 1594 aa13.84□□□□□ -0.19
CCDC196-201ENST00000359454 DNAJC5BQ9UF47 199 aa13.84□□□□□ -0.19
CCDC196-201ENST00000359454 KCNA4P22459 653 aa13.72□□□□□ -0.21
CCDC196-201ENST00000359454 NACADO15069 1562 aa13.71□□□□□ -0.22
CCDC196-201ENST00000359454 SCAF1Q9H7N4 1312 aaKnown RBP13.64□□□□□ -0.23
CCDC196-201ENST00000359454 DCAF8L2P0C7V8 631 aa13.59□□□□□ -0.23
CCDC196-201ENST00000359454 NCBP3Q53F19 620 aaKnown RBP13.57□□□□□ -0.24
CCDC196-201ENST00000359454 PABPN1Q86U42 306 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC196-201ENST00000359454 MYO15BQ96JP2 1530 aa13.47□□□□□ -0.25
CCDC196-201ENST00000359454 UNC13AQ9UPW8 1703 aa13.47□□□□□ -0.25
CCDC196-201ENST00000359454 MAPK8IP2Q13387 824 aaPredicted RBP13.46□□□□□ -0.25
CCDC196-201ENST00000359454 CNKSR2Q8WXI2 1034 aa13.45□□□□□ -0.26
CCDC196-201ENST00000359454 BICRAQ9NZM4 1560 aa13.42□□□□□ -0.26
CCDC196-201ENST00000359454 NPM3O75607 178 aaKnown RBP13.35□□□□□ -0.27
CCDC196-201ENST00000359454 SHROOM4Q9ULL8 1493 aa13.27□□□□□ -0.29
CCDC196-201ENST00000359454 DMRT2Q9Y5R5 561 aa13.24□□□□□ -0.29
CCDC196-201ENST00000359454 DCAF1Q9Y4B6 1507 aa13.23□□□□□ -0.29
CCDC196-201ENST00000359454 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
CCDC196-201ENST00000359454 CECR2Q9BXF3 1484 aa13.18□□□□□ -0.3
CCDC196-201ENST00000359454 CC2D2AQ9P2K1 1620 aa13.17□□□□□ -0.3
CCDC196-201ENST00000359454 RNF216Q9NWF9 866 aaPredicted RBP13.13□□□□□ -0.31
CCDC196-201ENST00000359454 SCRIBQ14160 1630 aa13.13□□□□□ -0.31
CCDC196-201ENST00000359454 SLC4A1APQ9BWU0 796 aaKnown RBP13.12□□□□□ -0.31
CCDC196-201ENST00000359454 EIF4G1Q04637 1599 aaKnown RBP13.11□□□□□ -0.31
CCDC196-201ENST00000359454 HOXD11P31277 338 aaPredicted RBP13.02□□□□□ -0.33
CCDC196-201ENST00000359454 EHMT2Q96KQ7 1210 aa12.95□□□□□ -0.34
CCDC196-201ENST00000359454 DNAJC5Q9H3Z4 198 aa12.87□□□□□ -0.35
CCDC196-201ENST00000359454 DCAF8L1A6NGE4 600 aa12.7□□□□□ -0.38
CCDC196-201ENST00000359454 CSRNP3Q8WYN3 585 aa12.69□□□□□ -0.38
CCDC196-201ENST00000359454 CUX2O14529 1486 aa12.68□□□□□ -0.38
CCDC196-201ENST00000359454 NCAPD3P42695 1498 aa12.66□□□□□ -0.38
CCDC196-201ENST00000359454 ERCC6Q03468 1493 aa12.63□□□□□ -0.39
CCDC196-201ENST00000359454 ZBTB22O15209 634 aa12.62□□□□□ -0.39
CCDC196-201ENST00000359454 FOXD4L1Q9NU39 408 aa12.6□□□□□ -0.39
CCDC196-201ENST00000359454 ATAD2BQ9ULI0 1458 aa12.58□□□□□ -0.4
CCDC196-201ENST00000359454 SLC4A2P04920 1241 aa12.55□□□□□ -0.4
CCDC196-201ENST00000359454 SMARCA2P51531 1590 aa12.55□□□□□ -0.4
CCDC196-201ENST00000359454 HMGXB3Q12766 1538 aa12.54□□□□□ -0.4
CCDC196-201ENST00000359454 SMARCA4P51532 1647 aa12.51□□□□□ -0.41
CCDC196-201ENST00000359454 NESP48681 1621 aa12.48□□□□□ -0.41
CCDC196-201ENST00000359454 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.45□□□□□ -0.42
CCDC196-201ENST00000359454 BAZ1BQ9UIG0 1483 aaKnown RBP12.45□□□□□ -0.42
CCDC196-201ENST00000359454 BAZ1AQ9NRL2 1556 aaPredicted RBP12.44□□□□□ -0.42
CCDC196-201ENST00000359454 PEG3Q9GZU2 1588 aa12.41□□□□□ -0.42
CCDC196-201ENST00000359454 THOC2Q8NI27 1593 aaKnown RBP12.39□□□□□ -0.43
CCDC196-201ENST00000359454 LAMC3Q9Y6N6 1575 aa12.39□□□□□ -0.43
CCDC196-201ENST00000359454 MYCNP04198 464 aaPredicted RBP12.35□□□□□ -0.43
CCDC196-201ENST00000359454 PDS5BQ9NTI5 1447 aa12.35□□□□□ -0.43
CCDC196-201ENST00000359454 MROH2BQ7Z745 1585 aa12.32□□□□□ -0.44
CCDC196-201ENST00000359454 KIF21AQ7Z4S6 1674 aa12.3□□□□□ -0.44
CCDC196-201ENST00000359454 CADPSQ9ULU8 1353 aa12.27□□□□□ -0.45
CCDC196-201ENST00000359454 MRC2Q9UBG0 1479 aa12.24□□□□□ -0.45
CCDC196-201ENST00000359454 U3KPZ7 1027 aaPredicted RBP12.24□□□□□ -0.45
CCDC196-201ENST00000359454 TRIM41Q8WV44 630 aa12.21□□□□□ -0.45
CCDC196-201ENST00000359454 WDR62O43379 1518 aa12.2□□□□□ -0.46
CCDC196-201ENST00000359454 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.17□□□□□ -0.46
CCDC196-201ENST00000359454 HNRNPUL2Q1KMD3 747 aaKnown RBP12.17□□□□□ -0.46
CCDC196-201ENST00000359454 WIZO95785 1651 aa12.16□□□□□ -0.46
CCDC196-201ENST00000359454 CEP164Q9UPV0 1460 aa12.14□□□□□ -0.47
CCDC196-201ENST00000359454 ATXN8OSP0DMR3 200 aa12.14□□□□□ -0.47
CCDC196-201ENST00000359454 SAMD1Q6SPF0 538 aaPredicted RBP12.13□□□□□ -0.47
CCDC196-201ENST00000359454 FANCD2Q9BXW9 1451 aa12.11□□□□□ -0.47
CCDC196-201ENST00000359454 CFTRP13569 1480 aa12.08□□□□□ -0.47
CCDC196-201ENST00000359454 OSCARQ8IYS5 282 aa12.08□□□□□ -0.48
CCDC196-201ENST00000359454 RNF39Q9H2S5 420 aa12.08□□□□□ -0.48
CCDC196-201ENST00000359454 APLP2Q06481 763 aa12.02□□□□□ -0.49
CCDC196-201ENST00000359454 RSF1Q96T23 1441 aaPredicted RBP12.02□□□□□ -0.49
CCDC196-201ENST00000359454 TOP2AP11388 1531 aaKnown RBP12.01□□□□□ -0.49
CCDC196-201ENST00000359454 URB2Q14146 1524 aaKnown RBP12.01□□□□□ -0.49
CCDC196-201ENST00000359454 ATF5Q9Y2D1 282 aaPredicted RBP11.98□□□□□ -0.49
CCDC196-201ENST00000359454 C1QBPQ07021 282 aaKnown RBP11.96□□□□□ -0.49
CCDC196-201ENST00000359454 IFT140Q96RY7 1462 aa11.92□□□□□ -0.5
CCDC196-201ENST00000359454 PRDM2Q13029 1718 aa11.91□□□□□ -0.5
CCDC196-201ENST00000359454 RIMBP3CA6NJZ7 1639 aa11.9□□□□□ -0.5
CCDC196-201ENST00000359454 RIMBP3BA6NNM3 1639 aa11.9□□□□□ -0.5
CCDC196-201ENST00000359454 RIMBP3Q9UFD9 1639 aa11.9□□□□□ -0.5
CCDC196-201ENST00000359454 ZNF608Q9ULD9 1512 aaPredicted RBP11.89□□□□□ -0.51
CCDC196-201ENST00000359454 CCDC88BA6NC98 1476 aa11.88□□□□□ -0.51
CCDC196-201ENST00000359454 TOPBP1Q92547 1522 aa11.86□□□□□ -0.51
CCDC196-201ENST00000359454 ABCC8Q09428 1581 aa11.86□□□□□ -0.51
CCDC196-201ENST00000359454 ARHGEF11O15085 1522 aa11.86□□□□□ -0.51
CCDC196-201ENST00000359454 SPINK5Q9NQ38 1064 aaPredicted RBP11.85□□□□□ -0.51
CCDC196-201ENST00000359454 CAPN15O75808 1086 aa11.82□□□□□ -0.52
CCDC196-201ENST00000359454 EIF4G3O43432 1585 aaKnown RBP11.81□□□□□ -0.52
CCDC196-201ENST00000359454 DNMBPQ6XZF7 1577 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms