RNA–Protein interactions for RNA: ENST00000335950.8

AL163195.3-201, humanhuman

TSL 1 (best)

Gene AL163195.3, Length 2,046 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL163195.3-201ENST00000335950 NISCHQ9Y2I1 1504 aa16.91■□□□□ 0.3
AL163195.3-201ENST00000335950 CHIC1Q5VXU3 224 aa16.13■□□□□ 0.17
AL163195.3-201ENST00000335950 AEBP2Q6ZN18 517 aaPredicted RBP15.35■□□□□ 0.05
AL163195.3-201ENST00000335950 CCDC180Q9P1Z9 1646 aa15.05■□□□□ 0
AL163195.3-201ENST00000335950 ABCC9O60706 1549 aa14.81□□□□□ -0.04
AL163195.3-201ENST00000335950 PHF23Q9BUL5 403 aaPredicted RBP14.43□□□□□ -0.1
AL163195.3-201ENST00000335950 EHMT2Q96KQ7 1210 aa14.32□□□□□ -0.12
AL163195.3-201ENST00000335950 SLC24A1O60721 1099 aa14.31□□□□□ -0.12
AL163195.3-201ENST00000335950 RB1CC1Q8TDY2 1594 aa14.19□□□□□ -0.14
AL163195.3-201ENST00000335950 NACADO15069 1562 aa14.14□□□□□ -0.15
AL163195.3-201ENST00000335950 ZCCHC6Q5VYS8 1495 aaKnown RBP14.1□□□□□ -0.15
AL163195.3-201ENST00000335950 DCAF8L2P0C7V8 631 aa14.09□□□□□ -0.15
AL163195.3-201ENST00000335950 MYO15BQ96JP2 1530 aa14.03□□□□□ -0.16
AL163195.3-201ENST00000335950 DCAF1Q9Y4B6 1507 aa13.97□□□□□ -0.17
AL163195.3-201ENST00000335950 UNC13AQ9UPW8 1703 aa13.91□□□□□ -0.18
AL163195.3-201ENST00000335950 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
AL163195.3-201ENST00000335950 BICRAQ9NZM4 1560 aa13.81□□□□□ -0.2
AL163195.3-201ENST00000335950 SCRIBQ14160 1630 aa13.77□□□□□ -0.2
AL163195.3-201ENST00000335950 PLPPR3Q6T4P5 718 aa13.66□□□□□ -0.22
AL163195.3-201ENST00000335950 DNAJC5BQ9UF47 199 aa13.64□□□□□ -0.23
AL163195.3-201ENST00000335950 SHROOM4Q9ULL8 1493 aa13.6□□□□□ -0.23
AL163195.3-201ENST00000335950 KCNA4P22459 653 aa13.53□□□□□ -0.24
AL163195.3-201ENST00000335950 CSRNP3Q8WYN3 585 aa13.46□□□□□ -0.26
AL163195.3-201ENST00000335950 EIF4G1Q04637 1599 aaKnown RBP13.43□□□□□ -0.26
AL163195.3-201ENST00000335950 CC2D2AQ9P2K1 1620 aa13.39□□□□□ -0.27
AL163195.3-201ENST00000335950 RTN4Q9NQC3 1192 aaKnown RBP13.38□□□□□ -0.27
AL163195.3-201ENST00000335950 CECR2Q9BXF3 1484 aa13.29□□□□□ -0.28
AL163195.3-201ENST00000335950 AMER1Q5JTC6 1135 aaPredicted RBP13.2□□□□□ -0.3
AL163195.3-201ENST00000335950 SMARCA4P51532 1647 aa13.15□□□□□ -0.31
AL163195.3-201ENST00000335950 BAZ1AQ9NRL2 1556 aaPredicted RBP13.09□□□□□ -0.31
AL163195.3-201ENST00000335950 ATAD2BQ9ULI0 1458 aa13.08□□□□□ -0.32
AL163195.3-201ENST00000335950 MROH2BQ7Z745 1585 aa13.06□□□□□ -0.32
AL163195.3-201ENST00000335950 NCAPD3P42695 1498 aa13.06□□□□□ -0.32
AL163195.3-201ENST00000335950 SLC4A1APQ9BWU0 796 aaKnown RBP13.05□□□□□ -0.32
AL163195.3-201ENST00000335950 SMARCA2P51531 1590 aa13.03□□□□□ -0.32
AL163195.3-201ENST00000335950 HMGXB3Q12766 1538 aa13.01□□□□□ -0.33
AL163195.3-201ENST00000335950 PEG3Q9GZU2 1588 aa13□□□□□ -0.33
AL163195.3-201ENST00000335950 BAZ1BQ9UIG0 1483 aaKnown RBP12.96□□□□□ -0.33
AL163195.3-201ENST00000335950 ADRA2BP18089 450 aa12.92□□□□□ -0.34
AL163195.3-201ENST00000335950 WIZO95785 1651 aa12.91□□□□□ -0.34
AL163195.3-201ENST00000335950 RSF1Q96T23 1441 aaPredicted RBP12.86□□□□□ -0.35
AL163195.3-201ENST00000335950 NESP48681 1621 aa12.82□□□□□ -0.36
AL163195.3-201ENST00000335950 NCBP3Q53F19 620 aaKnown RBP12.8□□□□□ -0.36
AL163195.3-201ENST00000335950 TOP2AP11388 1531 aaKnown RBP12.76□□□□□ -0.37
AL163195.3-201ENST00000335950 ERCC6Q03468 1493 aa12.74□□□□□ -0.37
AL163195.3-201ENST00000335950 LAMC3Q9Y6N6 1575 aa12.73□□□□□ -0.37
AL163195.3-201ENST00000335950 CADPSQ9ULU8 1353 aa12.66□□□□□ -0.38
AL163195.3-201ENST00000335950 SENP3Q9H4L4 574 aaPredicted RBP12.66□□□□□ -0.38
AL163195.3-201ENST00000335950 KIF21AQ7Z4S6 1674 aa12.66□□□□□ -0.38
AL163195.3-201ENST00000335950 THOC2Q8NI27 1593 aaKnown RBP12.64□□□□□ -0.39
AL163195.3-201ENST00000335950 CUX2O14529 1486 aa12.62□□□□□ -0.39
AL163195.3-201ENST00000335950 PDS5BQ9NTI5 1447 aa12.61□□□□□ -0.39
AL163195.3-201ENST00000335950 CCDC88BA6NC98 1476 aa12.6□□□□□ -0.39
AL163195.3-201ENST00000335950 CFTRP13569 1480 aa12.59□□□□□ -0.39
AL163195.3-201ENST00000335950 FANCD2Q9BXW9 1451 aa12.55□□□□□ -0.4
AL163195.3-201ENST00000335950 DNAJC5Q9H3Z4 198 aa12.55□□□□□ -0.4
AL163195.3-201ENST00000335950 CEP164Q9UPV0 1460 aa12.54□□□□□ -0.4
AL163195.3-201ENST00000335950 MRC2Q9UBG0 1479 aa12.53□□□□□ -0.4
AL163195.3-201ENST00000335950 PRKCSHP14314 528 aaPredicted RBP12.51□□□□□ -0.41
AL163195.3-201ENST00000335950 WDR62O43379 1518 aa12.51□□□□□ -0.41
AL163195.3-201ENST00000335950 ZBTB22O15209 634 aa12.5□□□□□ -0.41
AL163195.3-201ENST00000335950 PRDM2Q13029 1718 aa12.5□□□□□ -0.41
AL163195.3-201ENST00000335950 SUPT5HO00267 1087 aaKnown RBP12.46□□□□□ -0.41
AL163195.3-201ENST00000335950 DAXXQ9UER7 740 aaPredicted RBP12.46□□□□□ -0.41
AL163195.3-201ENST00000335950 URB2Q14146 1524 aaKnown RBP12.45□□□□□ -0.42
AL163195.3-201ENST00000335950 PPP6R1Q9UPN7 881 aa12.35□□□□□ -0.43
AL163195.3-201ENST00000335950 TOPBP1Q92547 1522 aa12.35□□□□□ -0.43
AL163195.3-201ENST00000335950 HRCP23327 699 aa12.35□□□□□ -0.43
AL163195.3-201ENST00000335950 DNMBPQ6XZF7 1577 aa12.32□□□□□ -0.44
AL163195.3-201ENST00000335950 ABCC8Q09428 1581 aa12.28□□□□□ -0.44
AL163195.3-201ENST00000335950 IFT140Q96RY7 1462 aa12.26□□□□□ -0.45
AL163195.3-201ENST00000335950 ZNF608Q9ULD9 1512 aaPredicted RBP12.26□□□□□ -0.45
AL163195.3-201ENST00000335950 PPP4R3CPQ6ZMV5 832 aa12.26□□□□□ -0.45
AL163195.3-201ENST00000335950 CUX1P39880 1505 aa12.25□□□□□ -0.45
AL163195.3-201ENST00000335950 POLA1P09884 1462 aaPredicted RBP12.25□□□□□ -0.45
AL163195.3-201ENST00000335950 TAOK2Q9UL54 1235 aa12.23□□□□□ -0.45
AL163195.3-201ENST00000335950 TARBP1Q13395 1621 aaKnown RBP12.23□□□□□ -0.45
AL163195.3-201ENST00000335950 EIF4G3O43432 1585 aaKnown RBP12.21□□□□□ -0.45
AL163195.3-201ENST00000335950 BCANQ96GW7 911 aa12.21□□□□□ -0.46
AL163195.3-201ENST00000335950 FGD5Q6ZNL6 1462 aa12.21□□□□□ -0.46
AL163195.3-201ENST00000335950 RAD54L2Q9Y4B4 1467 aa12.2□□□□□ -0.46
AL163195.3-201ENST00000335950 NPM3O75607 178 aaKnown RBP12.18□□□□□ -0.46
AL163195.3-201ENST00000335950 SOGA1O94964 1423 aa12.16□□□□□ -0.46
AL163195.3-201ENST00000335950 AQRO60306 1485 aaKnown RBP eCLIP12.15□□□□□ -0.46
AL163195.3-201ENST00000335950 PLCB2Q00722 1185 aa12.15□□□□□ -0.47
AL163195.3-201ENST00000335950 SYNJ1O43426 1573 aa12.14□□□□□ -0.47
AL163195.3-201ENST00000335950 WDR97A6NE52 1622 aa12.13□□□□□ -0.47
AL163195.3-201ENST00000335950 BIVM-ERCC5R4GMW8 1640 aa12.12□□□□□ -0.47
AL163195.3-201ENST00000335950 WRNQ14191 1432 aaPredicted RBP eCLIP12.12□□□□□ -0.47
AL163195.3-201ENST00000335950 TDRD9Q8NDG6 1382 aaKnown RBP12.11□□□□□ -0.47
AL163195.3-201ENST00000335950 TOP2BQ02880 1626 aa12.11□□□□□ -0.47
AL163195.3-201ENST00000335950 FKBP8Q14318 412 aa12.11□□□□□ -0.47
AL163195.3-201ENST00000335950 TIMELESSQ9UNS1 1208 aa12.08□□□□□ -0.48
AL163195.3-201ENST00000335950 PELP1Q8IZL8 1130 aaKnown RBP12.07□□□□□ -0.48
AL163195.3-201ENST00000335950 ABCA10Q8WWZ4 1543 aa12.07□□□□□ -0.48
AL163195.3-201ENST00000335950 SNAPC4Q5SXM2 1469 aa12.06□□□□□ -0.48
AL163195.3-201ENST00000335950 CHD1O14646 1710 aa12.06□□□□□ -0.48
AL163195.3-201ENST00000335950 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
AL163195.3-201ENST00000335950 TPRNQ4KMQ1 711 aa12.06□□□□□ -0.48
AL163195.3-201ENST00000335950 ARXQ96QS3 562 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms