RNA–Protein interactions for RNA: ENST00000306793.4

GFRA2-201, Transcript of GDNF family receptor alpha 2, humanhuman

TSL 5

Gene GFRA2, Length 3,558 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA2-201ENST00000306793 NISCHQ9Y2I1 1504 aa23.65■■□□□ 1.38
GFRA2-201ENST00000306793 SHROOM4Q9ULL8 1493 aa21.68■■□□□ 1.06
GFRA2-201ENST00000306793 DCAF8L2P0C7V8 631 aa21.58■■□□□ 1.04
GFRA2-201ENST00000306793 SUPT5HO00267 1087 aaKnown RBP21.32■■□□□ 1
GFRA2-201ENST00000306793 EHMT2Q96KQ7 1210 aa20.34■□□□□ 0.85
GFRA2-201ENST00000306793 CHIC1Q5VXU3 224 aa19.97■□□□□ 0.79
GFRA2-201ENST00000306793 FAM9AQ8IZU1 332 aaPredicted RBP19.96■□□□□ 0.79
GFRA2-201ENST00000306793 PCGF6Q9BYE7 350 aa19.96■□□□□ 0.79
GFRA2-201ENST00000306793 LOC105371045A0A1W2PR82 267 aa19.94■□□□□ 0.78
GFRA2-201ENST00000306793 ZCCHC6Q5VYS8 1495 aaKnown RBP19.84■□□□□ 0.77
GFRA2-201ENST00000306793 MYO15BQ96JP2 1530 aa19.73■□□□□ 0.75
GFRA2-201ENST00000306793 PPARGC1BQ86YN6 1023 aaKnown RBP19.62■□□□□ 0.73
GFRA2-201ENST00000306793 TTBK1Q5TCY1 1321 aaPredicted RBP19.56■□□□□ 0.72
GFRA2-201ENST00000306793 ABCC9O60706 1549 aa19.52■□□□□ 0.72
GFRA2-201ENST00000306793 CCDC180Q9P1Z9 1646 aa19.48■□□□□ 0.71
GFRA2-201ENST00000306793 TRIM41Q8WV44 630 aa19.45■□□□□ 0.7
GFRA2-201ENST00000306793 SCRIBQ14160 1630 aa19.33■□□□□ 0.69
GFRA2-201ENST00000306793 HRCP23327 699 aa19.31■□□□□ 0.68
GFRA2-201ENST00000306793 RANGAP1P46060 587 aaPredicted RBP19.14■□□□□ 0.65
GFRA2-201ENST00000306793 PABPN1Q86U42 306 aaKnown RBP eCLIP19.12■□□□□ 0.65
GFRA2-201ENST00000306793 RSF1Q96T23 1441 aaPredicted RBP18.97■□□□□ 0.63
GFRA2-201ENST00000306793 TRIM26Q12899 539 aaPredicted RBP18.97■□□□□ 0.63
GFRA2-201ENST00000306793 CECR2Q9BXF3 1484 aa18.93■□□□□ 0.62
GFRA2-201ENST00000306793 RB1CC1Q8TDY2 1594 aa18.82■□□□□ 0.6
GFRA2-201ENST00000306793 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.81■□□□□ 0.6
GFRA2-201ENST00000306793 UBTFP17480 764 aaKnown RBP18.79■□□□□ 0.6
GFRA2-201ENST00000306793 DCAF1Q9Y4B6 1507 aa18.73■□□□□ 0.59
GFRA2-201ENST00000306793 CCER1Q8TC90 406 aaPredicted RBP18.7■□□□□ 0.58
GFRA2-201ENST00000306793 MROH2BQ7Z745 1585 aa18.66■□□□□ 0.58
GFRA2-201ENST00000306793 WIZO95785 1651 aa18.55■□□□□ 0.56
GFRA2-201ENST00000306793 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
GFRA2-201ENST00000306793 ABCC8Q09428 1581 aa18.43■□□□□ 0.54
GFRA2-201ENST00000306793 YTHDC1Q96MU7 727 aaKnown RBP18.36■□□□□ 0.53
GFRA2-201ENST00000306793 NACADO15069 1562 aa18.35■□□□□ 0.53
GFRA2-201ENST00000306793 ZEB1P37275 1124 aaPredicted RBP18.32■□□□□ 0.52
GFRA2-201ENST00000306793 SOGA1O94964 1423 aa18.32■□□□□ 0.52
GFRA2-201ENST00000306793 APLP2Q06481 763 aa18.31■□□□□ 0.52
GFRA2-201ENST00000306793 CCDC88BA6NC98 1476 aa18.31■□□□□ 0.52
GFRA2-201ENST00000306793 ITGAEP38570 1179 aa18.3■□□□□ 0.52
GFRA2-201ENST00000306793 CSRNP3Q8WYN3 585 aa18.29■□□□□ 0.52
GFRA2-201ENST00000306793 ATP1B4Q9UN42 357 aaPredicted RBP18.26■□□□□ 0.51
GFRA2-201ENST00000306793 RUSC2Q8N2Y8 1516 aa18.24■□□□□ 0.51
GFRA2-201ENST00000306793 BAZ1AQ9NRL2 1556 aaPredicted RBP18.13■□□□□ 0.49
GFRA2-201ENST00000306793 CEP162Q5TB80 1403 aa18.1■□□□□ 0.49
GFRA2-201ENST00000306793 DIEXFQ68CQ4 756 aaKnown RBP18.09■□□□□ 0.49
GFRA2-201ENST00000306793 P3H3Q8IVL6 736 aa18.03■□□□□ 0.48
GFRA2-201ENST00000306793 SCAF1Q9H7N4 1312 aaKnown RBP18.01■□□□□ 0.47
GFRA2-201ENST00000306793 WRNQ14191 1432 aaPredicted RBP eCLIP17.97■□□□□ 0.47
GFRA2-201ENST00000306793 SMARCA4P51532 1647 aa17.96■□□□□ 0.47
GFRA2-201ENST00000306793 NEUROD1Q13562 356 aa17.93■□□□□ 0.46
GFRA2-201ENST00000306793 TOP2AP11388 1531 aaKnown RBP17.91■□□□□ 0.46
GFRA2-201ENST00000306793 SMARCA2P51531 1590 aa17.91■□□□□ 0.46
GFRA2-201ENST00000306793 GTF3C3Q9Y5Q9 886 aa17.86■□□□□ 0.45
GFRA2-201ENST00000306793 BAZ1BQ9UIG0 1483 aaKnown RBP17.85■□□□□ 0.45
GFRA2-201ENST00000306793 CLIP1P30622 1438 aa17.84■□□□□ 0.45
GFRA2-201ENST00000306793 TNIKQ9UKE5 1360 aa17.82■□□□□ 0.44
GFRA2-201ENST00000306793 ARID3CA6NKF2 412 aa17.81■□□□□ 0.44
GFRA2-201ENST00000306793 UNC13AQ9UPW8 1703 aa17.78■□□□□ 0.44
GFRA2-201ENST00000306793 GOLGA3Q08378 1498 aa17.77■□□□□ 0.44
GFRA2-201ENST00000306793 KANK4Q5T7N3 995 aaPredicted RBP17.77■□□□□ 0.43
GFRA2-201ENST00000306793 CENPBP07199 599 aaPredicted RBP17.76■□□□□ 0.43
GFRA2-201ENST00000306793 ZNF316A6NFI3 1004 aaPredicted RBP17.75■□□□□ 0.43
GFRA2-201ENST00000306793 FAM50AQ14320 339 aaKnown RBP17.75■□□□□ 0.43
GFRA2-201ENST00000306793 RAPGEF2Q9Y4G8 1499 aa17.74■□□□□ 0.43
GFRA2-201ENST00000306793 MIER1Q8N108 512 aa17.74■□□□□ 0.43
GFRA2-201ENST00000306793 ACIN1Q9UKV3 1341 aaKnown RBP17.72■□□□□ 0.43
GFRA2-201ENST00000306793 ATAD2BQ9ULI0 1458 aa17.71■□□□□ 0.43
GFRA2-201ENST00000306793 HIRIP3Q9BW71 556 aaPredicted RBP17.69■□□□□ 0.42
GFRA2-201ENST00000306793 BICRAQ9NZM4 1560 aa17.68■□□□□ 0.42
GFRA2-201ENST00000306793 SYNJ1O43426 1573 aa17.67■□□□□ 0.42
GFRA2-201ENST00000306793 CNGB1Q14028 1251 aaPredicted RBP17.61■□□□□ 0.41
GFRA2-201ENST00000306793 CEP164Q9UPV0 1460 aa17.61■□□□□ 0.41
GFRA2-201ENST00000306793 EIF4G1Q04637 1599 aaKnown RBP17.58■□□□□ 0.41
GFRA2-201ENST00000306793 EEA1Q15075 1411 aa17.55■□□□□ 0.4
GFRA2-201ENST00000306793 VPS8Q8N3P4 1428 aa17.49■□□□□ 0.39
GFRA2-201ENST00000306793 DNAJC5BQ9UF47 199 aa17.49■□□□□ 0.39
GFRA2-201ENST00000306793 SIN3AQ96ST3 1273 aa17.47■□□□□ 0.39
GFRA2-201ENST00000306793 BCANQ96GW7 911 aa17.45■□□□□ 0.38
GFRA2-201ENST00000306793 CUX2O14529 1486 aa17.43■□□□□ 0.38
GFRA2-201ENST00000306793 KIF27Q86VH2 1401 aa17.4■□□□□ 0.38
GFRA2-201ENST00000306793 CHIC2Q9UKJ5 165 aa17.4■□□□□ 0.38
GFRA2-201ENST00000306793 KCNH8Q96L42 1107 aa17.38■□□□□ 0.37
GFRA2-201ENST00000306793 DDX10Q13206 875 aaKnown RBP17.38■□□□□ 0.37
GFRA2-201ENST00000306793 KIF21BO75037 1637 aa17.35■□□□□ 0.37
GFRA2-201ENST00000306793 ARAP1Q96P48 1450 aa17.33■□□□□ 0.36
GFRA2-201ENST00000306793 FBLN2P98095 1184 aa17.32■□□□□ 0.36
GFRA2-201ENST00000306793 POLR3GLQ9BT43 218 aa17.3■□□□□ 0.36
GFRA2-201ENST00000306793 SENP3-EIF4A1A0A087X0R7 540 aa17.29■□□□□ 0.36
GFRA2-201ENST00000306793 CARMIL1Q5VZK9 1371 aa17.29■□□□□ 0.36
GFRA2-201ENST00000306793 TRIM52Q96A61 297 aa17.29■□□□□ 0.36
GFRA2-201ENST00000306793 CUX1P39880 1505 aa17.28■□□□□ 0.36
GFRA2-201ENST00000306793 TDRD9Q8NDG6 1382 aaKnown RBP17.28■□□□□ 0.36
GFRA2-201ENST00000306793 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
GFRA2-201ENST00000306793 RRP7BPQ9NSQ0 103 aa17.25■□□□□ 0.35
GFRA2-201ENST00000306793 NESP48681 1621 aa17.24■□□□□ 0.35
GFRA2-201ENST00000306793 CCNB3Q8WWL7 1395 aa17.24■□□□□ 0.35
GFRA2-201ENST00000306793 DHX57Q6P158 1386 aaKnown RBP17.24■□□□□ 0.35
GFRA2-201ENST00000306793 FHOD3Q2V2M9 1422 aa17.23■□□□□ 0.35
GFRA2-201ENST00000306793 IGF1RP08069 1367 aa17.21■□□□□ 0.35
GFRA2-201ENST00000306793 RAB3GAP2Q9H2M9 1393 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms