RNA–Protein interactions for RNA: ENST00000306167.11

MTM1-201, Transcript of myotubularin 1, humanhuman

TSL 5

Gene MTM1, Length 2,955 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTM1-201ENST00000306167 CHIC1Q5VXU3 224 aa14.48□□□□□ -0.09
MTM1-201ENST00000306167 AEBP2Q6ZN18 517 aaPredicted RBP14.33□□□□□ -0.12
MTM1-201ENST00000306167 PHF23Q9BUL5 403 aaPredicted RBP13.04□□□□□ -0.32
MTM1-201ENST00000306167 DNAJC5BQ9UF47 199 aa12.5□□□□□ -0.41
MTM1-201ENST00000306167 DNAJC5Q9H3Z4 198 aa12.4□□□□□ -0.42
MTM1-201ENST00000306167 ABCC9O60706 1549 aa12.15□□□□□ -0.46
MTM1-201ENST00000306167 PLPPR3Q6T4P5 718 aa12.05□□□□□ -0.48
MTM1-201ENST00000306167 EHMT2Q96KQ7 1210 aa11.94□□□□□ -0.5
MTM1-201ENST00000306167 SENP3Q9H4L4 574 aaPredicted RBP11.7□□□□□ -0.54
MTM1-201ENST00000306167 ADRA2BP18089 450 aa11.66□□□□□ -0.54
MTM1-201ENST00000306167 NISCHQ9Y2I1 1504 aa11.65□□□□□ -0.55
MTM1-201ENST00000306167 KCNA4P22459 653 aa11.64□□□□□ -0.55
MTM1-201ENST00000306167 TRIM41Q8WV44 630 aa11.43□□□□□ -0.58
MTM1-201ENST00000306167 PPP6R1Q9UPN7 881 aa11.37□□□□□ -0.59
MTM1-201ENST00000306167 CSRNP3Q8WYN3 585 aa11.27□□□□□ -0.61
MTM1-201ENST00000306167 PABPN1Q86U42 306 aaKnown RBP eCLIP11.18□□□□□ -0.62
MTM1-201ENST00000306167 CECR2Q9BXF3 1484 aa11.07□□□□□ -0.64
MTM1-201ENST00000306167 SLC4A1APQ9BWU0 796 aaKnown RBP11.06□□□□□ -0.64
MTM1-201ENST00000306167 FOXD1Q16676 465 aa11.01□□□□□ -0.65
MTM1-201ENST00000306167 RB1CC1Q8TDY2 1594 aa10.97□□□□□ -0.65
MTM1-201ENST00000306167 CUX2O14529 1486 aa10.93□□□□□ -0.66
MTM1-201ENST00000306167 ILDR1Q86SU0 546 aaPredicted RBP10.89□□□□□ -0.67
MTM1-201ENST00000306167 CC2D2AQ9P2K1 1620 aa10.85□□□□□ -0.67
MTM1-201ENST00000306167 CCDC180Q9P1Z9 1646 aa10.82□□□□□ -0.68
MTM1-201ENST00000306167 PPP4R3CPQ6ZMV5 832 aa10.82□□□□□ -0.68
MTM1-201ENST00000306167 SLC24A1O60721 1099 aa10.8□□□□□ -0.68
MTM1-201ENST00000306167 ZBTB22O15209 634 aa10.79□□□□□ -0.68
MTM1-201ENST00000306167 RTN4Q9NQC3 1192 aaKnown RBP10.74□□□□□ -0.69
MTM1-201ENST00000306167 NPM3O75607 178 aaKnown RBP10.67□□□□□ -0.7
MTM1-201ENST00000306167 BICRAQ9NZM4 1560 aa10.64□□□□□ -0.71
MTM1-201ENST00000306167 ERCC6Q03468 1493 aa10.61□□□□□ -0.71
MTM1-201ENST00000306167 UNC13AQ9UPW8 1703 aa10.61□□□□□ -0.71
MTM1-201ENST00000306167 NACADO15069 1562 aa10.58□□□□□ -0.72
MTM1-201ENST00000306167 PIAS4Q8N2W9 510 aaPredicted RBP10.56□□□□□ -0.72
MTM1-201ENST00000306167 TRHP20396 242 aaPredicted RBP10.53□□□□□ -0.72
MTM1-201ENST00000306167 NCBP3Q53F19 620 aaKnown RBP10.53□□□□□ -0.72
MTM1-201ENST00000306167 EIF4G1Q04637 1599 aaKnown RBP10.52□□□□□ -0.73
MTM1-201ENST00000306167 DCAF8L2P0C7V8 631 aa10.51□□□□□ -0.73
MTM1-201ENST00000306167 SHROOM4Q9ULL8 1493 aa10.38□□□□□ -0.75
MTM1-201ENST00000306167 AMER1Q5JTC6 1135 aaPredicted RBP10.35□□□□□ -0.75
MTM1-201ENST00000306167 OSCARQ8IYS5 282 aa10.35□□□□□ -0.75
MTM1-201ENST00000306167 FOXD4L1Q9NU39 408 aa10.25□□□□□ -0.77
MTM1-201ENST00000306167 SOCS7O14512 581 aa10.23□□□□□ -0.77
MTM1-201ENST00000306167 LMTK3Q96Q04 1460 aa10.22□□□□□ -0.77
MTM1-201ENST00000306167 CYB5RLQ6IPT4 315 aa10.21□□□□□ -0.78
MTM1-201ENST00000306167 CNKSR2Q8WXI2 1034 aa10.21□□□□□ -0.78
MTM1-201ENST00000306167 RIMBP3CA6NJZ7 1639 aa10.21□□□□□ -0.78
MTM1-201ENST00000306167 RIMBP3BA6NNM3 1639 aa10.21□□□□□ -0.78
MTM1-201ENST00000306167 RIMBP3Q9UFD9 1639 aa10.21□□□□□ -0.78
MTM1-201ENST00000306167 MAPK8IP2Q13387 824 aaPredicted RBP10.15□□□□□ -0.78
MTM1-201ENST00000306167 FKBP8Q14318 412 aa10.14□□□□□ -0.79
MTM1-201ENST00000306167 BAZ1AQ9NRL2 1556 aaPredicted RBP10.14□□□□□ -0.79
MTM1-201ENST00000306167 THOC2Q8NI27 1593 aaKnown RBP10.12□□□□□ -0.79
MTM1-201ENST00000306167 FBXO41Q8TF61 875 aa10.1□□□□□ -0.79
MTM1-201ENST00000306167 ARHGEF11O15085 1522 aa10.08□□□□□ -0.8
MTM1-201ENST00000306167 NESP48681 1621 aa10.06□□□□□ -0.8
MTM1-201ENST00000306167 ILDR2Q71H61 639 aa10.06□□□□□ -0.8
MTM1-201ENST00000306167 SMARCA2P51531 1590 aa10.01□□□□□ -0.81
MTM1-201ENST00000306167 MYO15BQ96JP2 1530 aa9.99□□□□□ -0.81
MTM1-201ENST00000306167 SCRIBQ14160 1630 aa9.98□□□□□ -0.81
MTM1-201ENST00000306167 SCAF1Q9H7N4 1312 aaKnown RBP9.95□□□□□ -0.82
MTM1-201ENST00000306167 DISP3Q9P2K9 1392 aa9.94□□□□□ -0.82
MTM1-201ENST00000306167 SLC4A2P04920 1241 aa9.93□□□□□ -0.82
MTM1-201ENST00000306167 KDM4FA0A1W2PPD8 638 aa9.91□□□□□ -0.82
MTM1-201ENST00000306167 ARAP1Q96P48 1450 aa9.89□□□□□ -0.83
MTM1-201ENST00000306167 ERCC6L2Q5T890 1561 aa9.88□□□□□ -0.83
MTM1-201ENST00000306167 PRKCSHP14314 528 aaPredicted RBP9.84□□□□□ -0.83
MTM1-201ENST00000306167 PDS5BQ9NTI5 1447 aa9.82□□□□□ -0.84
MTM1-201ENST00000306167 KIF21AQ7Z4S6 1674 aa9.82□□□□□ -0.84
MTM1-201ENST00000306167 NCAPD3P42695 1498 aa9.81□□□□□ -0.84
MTM1-201ENST00000306167 RNF216Q9NWF9 866 aaPredicted RBP9.8□□□□□ -0.84
MTM1-201ENST00000306167 MRC2Q9UBG0 1479 aa9.77□□□□□ -0.85
MTM1-201ENST00000306167 LAMC3Q9Y6N6 1575 aa9.76□□□□□ -0.85
MTM1-201ENST00000306167 HECW2Q9P2P5 1572 aa9.74□□□□□ -0.85
MTM1-201ENST00000306167 WDR62O43379 1518 aa9.73□□□□□ -0.85
MTM1-201ENST00000306167 ATF5Q9Y2D1 282 aaPredicted RBP9.69□□□□□ -0.86
MTM1-201ENST00000306167 SYNJ2O15056 1496 aa9.67□□□□□ -0.86
MTM1-201ENST00000306167 PLCB2Q00722 1185 aa9.66□□□□□ -0.86
MTM1-201ENST00000306167 RSF1Q96T23 1441 aaPredicted RBP9.65□□□□□ -0.86
MTM1-201ENST00000306167 MYCNP04198 464 aaPredicted RBP9.65□□□□□ -0.86
MTM1-201ENST00000306167 HAP1P54257 671 aaPredicted RBP9.61□□□□□ -0.87
MTM1-201ENST00000306167 ATAD2BQ9ULI0 1458 aa9.61□□□□□ -0.87
MTM1-201ENST00000306167 ATXN8OSP0DMR3 200 aa9.6□□□□□ -0.87
MTM1-201ENST00000306167 HMGXB3Q12766 1538 aa9.58□□□□□ -0.88
MTM1-201ENST00000306167 HOXD11P31277 338 aaPredicted RBP9.57□□□□□ -0.88
MTM1-201ENST00000306167 SPATA31D1Q6ZQQ2 1576 aa9.57□□□□□ -0.88
MTM1-201ENST00000306167 FBLN2P98095 1184 aa9.55□□□□□ -0.88
MTM1-201ENST00000306167 MSH5O43196 834 aa9.54□□□□□ -0.88
MTM1-201ENST00000306167 TAOK2Q9UL54 1235 aa9.51□□□□□ -0.89
MTM1-201ENST00000306167 ADGRL1O94910 1474 aa9.5□□□□□ -0.89
MTM1-201ENST00000306167 CEP164Q9UPV0 1460 aa9.49□□□□□ -0.89
MTM1-201ENST00000306167 CADPSQ9ULU8 1353 aa9.49□□□□□ -0.89
MTM1-201ENST00000306167 DMRT2Q9Y5R5 561 aa9.49□□□□□ -0.89
MTM1-201ENST00000306167 BAZ1BQ9UIG0 1483 aaKnown RBP9.47□□□□□ -0.89
MTM1-201ENST00000306167 ZNF608Q9ULD9 1512 aaPredicted RBP9.45□□□□□ -0.9
MTM1-201ENST00000306167 BCANQ96GW7 911 aa9.44□□□□□ -0.9
MTM1-201ENST00000306167 TPRNQ4KMQ1 711 aa9.44□□□□□ -0.9
MTM1-201ENST00000306167 CHD1O14646 1710 aa9.43□□□□□ -0.9
MTM1-201ENST00000306167 DCAF1Q9Y4B6 1507 aa9.42□□□□□ -0.9
MTM1-201ENST00000306167 KDM6BO15054 1643 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms