RNA–Protein interactions for RNA: ENST00000297977.9

HDX-201, Transcript of highly divergent homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDX, Length 6,200 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDX-201ENST00000297977 NISCHQ9Y2I1 1504 aa6.25□□□□□ -1.41
HDX-201ENST00000297977 DCAF8L2P0C7V8 631 aa5.81□□□□□ -1.48
HDX-201ENST00000297977 ABCC9O60706 1549 aa5.45□□□□□ -1.54
HDX-201ENST00000297977 CCDC180Q9P1Z9 1646 aa5.36□□□□□ -1.55
HDX-201ENST00000297977 SHROOM4Q9ULL8 1493 aa5.29□□□□□ -1.56
HDX-201ENST00000297977 SUPT5HO00267 1087 aaKnown RBP5.24□□□□□ -1.57
HDX-201ENST00000297977 PABPN1Q86U42 306 aaKnown RBP eCLIP5.22□□□□□ -1.57
HDX-201ENST00000297977 RB1CC1Q8TDY2 1594 aa5.22□□□□□ -1.57
HDX-201ENST00000297977 NACADO15069 1562 aa5.2□□□□□ -1.58
HDX-201ENST00000297977 SLC24A1O60721 1099 aa5.19□□□□□ -1.58
HDX-201ENST00000297977 MYT1Q01538 1121 aa5.18□□□□□ -1.58
HDX-201ENST00000297977 ZCCHC6Q5VYS8 1495 aaKnown RBP5.16□□□□□ -1.58
HDX-201ENST00000297977 FAM9AQ8IZU1 332 aaPredicted RBP5.15□□□□□ -1.59
HDX-201ENST00000297977 DCAF1Q9Y4B6 1507 aa5.13□□□□□ -1.59
HDX-201ENST00000297977 MYO15BQ96JP2 1530 aa5.13□□□□□ -1.59
HDX-201ENST00000297977 SCRIBQ14160 1630 aa5.08□□□□□ -1.6
HDX-201ENST00000297977 TTBK1Q5TCY1 1321 aaPredicted RBP5.04□□□□□ -1.6
HDX-201ENST00000297977 PELP1Q8IZL8 1130 aaKnown RBP4.98□□□□□ -1.61
HDX-201ENST00000297977 TRIM41Q8WV44 630 aa4.97□□□□□ -1.61
HDX-201ENST00000297977 APLP2Q06481 763 aa4.93□□□□□ -1.62
HDX-201ENST00000297977 BAZ1AQ9NRL2 1556 aaPredicted RBP4.93□□□□□ -1.62
HDX-201ENST00000297977 BAZ1BQ9UIG0 1483 aaKnown RBP4.91□□□□□ -1.62
HDX-201ENST00000297977 CECR2Q9BXF3 1484 aa4.9□□□□□ -1.62
HDX-201ENST00000297977 ERICH6Q7L0X2 663 aa4.89□□□□□ -1.63
HDX-201ENST00000297977 SMARCA2P51531 1590 aa4.89□□□□□ -1.63
HDX-201ENST00000297977 ERCC6Q03468 1493 aa4.88□□□□□ -1.63
HDX-201ENST00000297977 UBTFP17480 764 aaKnown RBP4.87□□□□□ -1.63
HDX-201ENST00000297977 PDS5BQ9NTI5 1447 aa4.87□□□□□ -1.63
HDX-201ENST00000297977 EHMT2Q96KQ7 1210 aa4.86□□□□□ -1.63
HDX-201ENST00000297977 RSF1Q96T23 1441 aaPredicted RBP4.85□□□□□ -1.63
HDX-201ENST00000297977 FBLN2P98095 1184 aa4.85□□□□□ -1.63
HDX-201ENST00000297977 NCAPD3P42695 1498 aa4.82□□□□□ -1.64
HDX-201ENST00000297977 ATAD2BQ9ULI0 1458 aa4.82□□□□□ -1.64
HDX-201ENST00000297977 CADPSQ9ULU8 1353 aa4.81□□□□□ -1.64
HDX-201ENST00000297977 RANGAP1P46060 587 aaPredicted RBP4.81□□□□□ -1.64
HDX-201ENST00000297977 NPM1P06748 294 aaKnown RBP eCLIP4.8□□□□□ -1.64
HDX-201ENST00000297977 ATP1B4Q9UN42 357 aaPredicted RBP4.8□□□□□ -1.64
HDX-201ENST00000297977 EIF4G1Q04637 1599 aaKnown RBP4.8□□□□□ -1.64
HDX-201ENST00000297977 CHMP7Q8WUX9 453 aaPredicted RBP4.8□□□□□ -1.64
HDX-201ENST00000297977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.79□□□□□ -1.64
HDX-201ENST00000297977 HNRNPUL2Q1KMD3 747 aaKnown RBP4.79□□□□□ -1.64
HDX-201ENST00000297977 DAXXQ9UER7 740 aaPredicted RBP4.79□□□□□ -1.64
HDX-201ENST00000297977 CHIC1Q5VXU3 224 aa4.78□□□□□ -1.64
HDX-201ENST00000297977 MROH2BQ7Z745 1585 aa4.77□□□□□ -1.65
HDX-201ENST00000297977 CSRNP3Q8WYN3 585 aa4.76□□□□□ -1.65
HDX-201ENST00000297977 DNAJC5BQ9UF47 199 aa4.75□□□□□ -1.65
HDX-201ENST00000297977 ABCC8Q09428 1581 aa4.75□□□□□ -1.65
HDX-201ENST00000297977 CDK11AQ9UQ88 783 aaPredicted RBP4.75□□□□□ -1.65
HDX-201ENST00000297977 SMARCA4P51532 1647 aa4.75□□□□□ -1.65
HDX-201ENST00000297977 WRNQ14191 1432 aaPredicted RBP eCLIP4.74□□□□□ -1.65
HDX-201ENST00000297977 BICRAQ9NZM4 1560 aa4.74□□□□□ -1.65
HDX-201ENST00000297977 ACIN1Q9UKV3 1341 aaKnown RBP4.73□□□□□ -1.65
HDX-201ENST00000297977 HMGXB3Q12766 1538 aa4.72□□□□□ -1.65
HDX-201ENST00000297977 CEP164Q9UPV0 1460 aa4.72□□□□□ -1.65
HDX-201ENST00000297977 MYT1LQ9UL68 1186 aa4.72□□□□□ -1.65
HDX-201ENST00000297977 CC2D2AQ9P2K1 1620 aa4.72□□□□□ -1.65
HDX-201ENST00000297977 TOP2AP11388 1531 aaKnown RBP4.72□□□□□ -1.65
HDX-201ENST00000297977 EEA1Q15075 1411 aa4.72□□□□□ -1.65
HDX-201ENST00000297977 KIF27Q86VH2 1401 aa4.71□□□□□ -1.65
HDX-201ENST00000297977 ZEB1P37275 1124 aaPredicted RBP4.71□□□□□ -1.65
HDX-201ENST00000297977 AMER1Q5JTC6 1135 aaPredicted RBP4.7□□□□□ -1.66
HDX-201ENST00000297977 OSCARQ8IYS5 282 aa4.7□□□□□ -1.66
HDX-201ENST00000297977 CCDC88BA6NC98 1476 aa4.7□□□□□ -1.66
HDX-201ENST00000297977 FANCD2Q9BXW9 1451 aa4.69□□□□□ -1.66
HDX-201ENST00000297977 SOGA1O94964 1423 aa4.68□□□□□ -1.66
HDX-201ENST00000297977 CFTRP13569 1480 aa4.66□□□□□ -1.66
HDX-201ENST00000297977 CUX2O14529 1486 aa4.65□□□□□ -1.67
HDX-201ENST00000297977 TDRD9Q8NDG6 1382 aaKnown RBP4.65□□□□□ -1.67
HDX-201ENST00000297977 MRC2Q9UBG0 1479 aa4.64□□□□□ -1.67
HDX-201ENST00000297977 CARMIL2Q6F5E8 1435 aa4.64□□□□□ -1.67
HDX-201ENST00000297977 NCBP3Q53F19 620 aaKnown RBP4.63□□□□□ -1.67
HDX-201ENST00000297977 LAMC3Q9Y6N6 1575 aa4.63□□□□□ -1.67
HDX-201ENST00000297977 CARMIL1Q5VZK9 1371 aa4.63□□□□□ -1.67
HDX-201ENST00000297977 WIZO95785 1651 aa4.63□□□□□ -1.67
HDX-201ENST00000297977 PLEKHD1A6NEE1 506 aa4.63□□□□□ -1.67
HDX-201ENST00000297977 ESF1Q9H501 851 aaKnown RBP4.63□□□□□ -1.67
HDX-201ENST00000297977 PEG3Q9GZU2 1588 aa4.62□□□□□ -1.67
HDX-201ENST00000297977 TRHP20396 242 aaPredicted RBP4.61□□□□□ -1.67
HDX-201ENST00000297977 P3H3Q8IVL6 736 aa4.61□□□□□ -1.67
HDX-201ENST00000297977 IFT140Q96RY7 1462 aa4.61□□□□□ -1.67
HDX-201ENST00000297977 JPH4Q96JJ6 628 aa4.59□□□□□ -1.67
HDX-201ENST00000297977 NESP48681 1621 aa4.59□□□□□ -1.67
HDX-201ENST00000297977 GRIN2BQ13224 1484 aa4.58□□□□□ -1.68
HDX-201ENST00000297977 GAPVD1Q14C86 1478 aa4.57□□□□□ -1.68
HDX-201ENST00000297977 TSPY4P0CV99 314 aa4.57□□□□□ -1.68
HDX-201ENST00000297977 TSPY10P0CW01 314 aa4.57□□□□□ -1.68
HDX-201ENST00000297977 GOLGA3Q08378 1498 aa4.57□□□□□ -1.68
HDX-201ENST00000297977 CYB5RLQ6IPT4 315 aa4.57□□□□□ -1.68
HDX-201ENST00000297977 LOC105371045A0A1W2PR82 267 aa4.57□□□□□ -1.68
HDX-201ENST00000297977 UNC13AQ9UPW8 1703 aa4.56□□□□□ -1.68
HDX-201ENST00000297977 FGD5Q6ZNL6 1462 aa4.56□□□□□ -1.68
HDX-201ENST00000297977 ARID3CA6NKF2 412 aa4.56□□□□□ -1.68
HDX-201ENST00000297977 ARXQ96QS3 562 aa4.56□□□□□ -1.68
HDX-201ENST00000297977 MTUS2Q5JR59 1369 aa4.56□□□□□ -1.68
HDX-201ENST00000297977 FHAD1B1AJZ9 1412 aa4.56□□□□□ -1.68
HDX-201ENST00000297977 KCNH8Q96L42 1107 aa4.56□□□□□ -1.68
HDX-201ENST00000297977 TOPBP1Q92547 1522 aa4.55□□□□□ -1.68
HDX-201ENST00000297977 RTN4Q9NQC3 1192 aaKnown RBP4.55□□□□□ -1.68
HDX-201ENST00000297977 ZNF777Q9ULD5 760 aaPredicted RBP4.55□□□□□ -1.68
HDX-201ENST00000297977 CLSPNQ9HAW4 1339 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms