RNA–Protein interactions for RNA: ENST00000235878.5

GBP3-201, Transcript of guanylate binding protein 3, humanhuman

TSL 2

Gene GBP3, Length 2,062 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-201ENST00000235878 AEBP2Q6ZN18 517 aaPredicted RBP17.19■□□□□ 0.34
GBP3-201ENST00000235878 CHIC1Q5VXU3 224 aa16.97■□□□□ 0.31
GBP3-201ENST00000235878 NISCHQ9Y2I1 1504 aa16.07■□□□□ 0.16
GBP3-201ENST00000235878 PHF23Q9BUL5 403 aaPredicted RBP14.96□□□□□ -0.01
GBP3-201ENST00000235878 SENP3Q9H4L4 574 aaPredicted RBP14.51□□□□□ -0.09
GBP3-201ENST00000235878 PLPPR3Q6T4P5 718 aa13.85□□□□□ -0.19
GBP3-201ENST00000235878 CCDC180Q9P1Z9 1646 aa13.69□□□□□ -0.22
GBP3-201ENST00000235878 ZCCHC6Q5VYS8 1495 aaKnown RBP13.59□□□□□ -0.23
GBP3-201ENST00000235878 SHROOM4Q9ULL8 1493 aa13.49□□□□□ -0.25
GBP3-201ENST00000235878 FOXD1Q16676 465 aa13.47□□□□□ -0.25
GBP3-201ENST00000235878 DCAF1Q9Y4B6 1507 aa13.27□□□□□ -0.29
GBP3-201ENST00000235878 SUPT5HO00267 1087 aaKnown RBP13.24□□□□□ -0.29
GBP3-201ENST00000235878 DCAF8L2P0C7V8 631 aa13.14□□□□□ -0.31
GBP3-201ENST00000235878 PPP6R1Q9UPN7 881 aa13.14□□□□□ -0.31
GBP3-201ENST00000235878 ADRA2BP18089 450 aa13.12□□□□□ -0.31
GBP3-201ENST00000235878 MYO15BQ96JP2 1530 aa12.92□□□□□ -0.34
GBP3-201ENST00000235878 ABCC9O60706 1549 aa12.78□□□□□ -0.36
GBP3-201ENST00000235878 PIAS4Q8N2W9 510 aaPredicted RBP12.73□□□□□ -0.37
GBP3-201ENST00000235878 SCRIBQ14160 1630 aa12.7□□□□□ -0.38
GBP3-201ENST00000235878 RSF1Q96T23 1441 aaPredicted RBP12.7□□□□□ -0.38
GBP3-201ENST00000235878 NACADO15069 1562 aa12.67□□□□□ -0.38
GBP3-201ENST00000235878 RB1CC1Q8TDY2 1594 aa12.55□□□□□ -0.4
GBP3-201ENST00000235878 LOC105371045A0A1W2PR82 267 aa12.53□□□□□ -0.4
GBP3-201ENST00000235878 HRCP23327 699 aa12.5□□□□□ -0.41
GBP3-201ENST00000235878 CECR2Q9BXF3 1484 aa12.5□□□□□ -0.41
GBP3-201ENST00000235878 MROH2BQ7Z745 1585 aa12.46□□□□□ -0.41
GBP3-201ENST00000235878 PCGF6Q9BYE7 350 aa12.44□□□□□ -0.42
GBP3-201ENST00000235878 TRIM41Q8WV44 630 aa12.4□□□□□ -0.42
GBP3-201ENST00000235878 WIZO95785 1651 aa12.36□□□□□ -0.43
GBP3-201ENST00000235878 BAZ1AQ9NRL2 1556 aaPredicted RBP12.33□□□□□ -0.44
GBP3-201ENST00000235878 TRIM26Q12899 539 aaPredicted RBP12.3□□□□□ -0.44
GBP3-201ENST00000235878 MSH5O43196 834 aa12.3□□□□□ -0.44
GBP3-201ENST00000235878 EIF4G1Q04637 1599 aaKnown RBP12.25□□□□□ -0.45
GBP3-201ENST00000235878 PPP4R3CPQ6ZMV5 832 aa12.25□□□□□ -0.45
GBP3-201ENST00000235878 KCNA4P22459 653 aa12.22□□□□□ -0.45
GBP3-201ENST00000235878 SMARCA4P51532 1647 aa12.22□□□□□ -0.45
GBP3-201ENST00000235878 UNC13AQ9UPW8 1703 aa12.21□□□□□ -0.45
GBP3-201ENST00000235878 TOP2AP11388 1531 aaKnown RBP12.21□□□□□ -0.45
GBP3-201ENST00000235878 FAM9AQ8IZU1 332 aaPredicted RBP12.2□□□□□ -0.46
GBP3-201ENST00000235878 CCDC88BA6NC98 1476 aa12.16□□□□□ -0.46
GBP3-201ENST00000235878 PPARGC1BQ86YN6 1023 aaKnown RBP12.15□□□□□ -0.46
GBP3-201ENST00000235878 SMARCA2P51531 1590 aa12.14□□□□□ -0.47
GBP3-201ENST00000235878 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
GBP3-201ENST00000235878 PEG3Q9GZU2 1588 aa12.06□□□□□ -0.48
GBP3-201ENST00000235878 ABCC8Q09428 1581 aa12.04□□□□□ -0.48
GBP3-201ENST00000235878 ZEB1P37275 1124 aaPredicted RBP12.04□□□□□ -0.48
GBP3-201ENST00000235878 PABPN1Q86U42 306 aaKnown RBP eCLIP12.02□□□□□ -0.48
GBP3-201ENST00000235878 EHMT2Q96KQ7 1210 aa12.01□□□□□ -0.49
GBP3-201ENST00000235878 SOGA1O94964 1423 aa11.96□□□□□ -0.49
GBP3-201ENST00000235878 EEA1Q15075 1411 aa11.96□□□□□ -0.49
GBP3-201ENST00000235878 SCAF1Q9H7N4 1312 aaKnown RBP11.96□□□□□ -0.49
GBP3-201ENST00000235878 NCBP3Q53F19 620 aaKnown RBP11.95□□□□□ -0.5
GBP3-201ENST00000235878 WRNQ14191 1432 aaPredicted RBP eCLIP11.95□□□□□ -0.5
GBP3-201ENST00000235878 ATAD2BQ9ULI0 1458 aa11.93□□□□□ -0.5
GBP3-201ENST00000235878 TNIKQ9UKE5 1360 aa11.93□□□□□ -0.5
GBP3-201ENST00000235878 CSRNP3Q8WYN3 585 aa11.93□□□□□ -0.5
GBP3-201ENST00000235878 RUSC2Q8N2Y8 1516 aa11.9□□□□□ -0.5
GBP3-201ENST00000235878 CEP162Q5TB80 1403 aa11.88□□□□□ -0.51
GBP3-201ENST00000235878 MAPK8IP2Q13387 824 aaPredicted RBP11.85□□□□□ -0.51
GBP3-201ENST00000235878 BAZ1BQ9UIG0 1483 aaKnown RBP11.85□□□□□ -0.51
GBP3-201ENST00000235878 CNKSR2Q8WXI2 1034 aa11.84□□□□□ -0.51
GBP3-201ENST00000235878 SYNJ1O43426 1573 aa11.83□□□□□ -0.52
GBP3-201ENST00000235878 GOLGA3Q08378 1498 aa11.82□□□□□ -0.52
GBP3-201ENST00000235878 NPM3O75607 178 aaKnown RBP11.82□□□□□ -0.52
GBP3-201ENST00000235878 UBTFP17480 764 aaKnown RBP11.79□□□□□ -0.52
GBP3-201ENST00000235878 KIF21BO75037 1637 aa11.78□□□□□ -0.52
GBP3-201ENST00000235878 CEP164Q9UPV0 1460 aa11.77□□□□□ -0.53
GBP3-201ENST00000235878 NCAPD3P42695 1498 aa11.75□□□□□ -0.53
GBP3-201ENST00000235878 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.74□□□□□ -0.53
GBP3-201ENST00000235878 TOP2BQ02880 1626 aa11.72□□□□□ -0.53
GBP3-201ENST00000235878 HMGXB3Q12766 1538 aa11.71□□□□□ -0.53
GBP3-201ENST00000235878 CCER1Q8TC90 406 aaPredicted RBP11.7□□□□□ -0.54
GBP3-201ENST00000235878 BIVM-ERCC5R4GMW8 1640 aa11.69□□□□□ -0.54
GBP3-201ENST00000235878 CLIP1P30622 1438 aa11.67□□□□□ -0.54
GBP3-201ENST00000235878 RAPGEF2Q9Y4G8 1499 aa11.67□□□□□ -0.54
GBP3-201ENST00000235878 SLC4A1APQ9BWU0 796 aaKnown RBP11.65□□□□□ -0.54
GBP3-201ENST00000235878 VPS8Q8N3P4 1428 aa11.64□□□□□ -0.55
GBP3-201ENST00000235878 DNAJC5BQ9UF47 199 aa11.64□□□□□ -0.55
GBP3-201ENST00000235878 DMRT2Q9Y5R5 561 aa11.63□□□□□ -0.55
GBP3-201ENST00000235878 PRXQ9BXM0 1461 aa11.63□□□□□ -0.55
GBP3-201ENST00000235878 CFTRP13569 1480 aa11.62□□□□□ -0.55
GBP3-201ENST00000235878 TTBK1Q5TCY1 1321 aaPredicted RBP11.62□□□□□ -0.55
GBP3-201ENST00000235878 ERICH3Q5RHP9 1530 aa11.61□□□□□ -0.55
GBP3-201ENST00000235878 CUX1P39880 1505 aa11.6□□□□□ -0.55
GBP3-201ENST00000235878 RNF216Q9NWF9 866 aaPredicted RBP11.56□□□□□ -0.56
GBP3-201ENST00000235878 KIF27Q86VH2 1401 aa11.54□□□□□ -0.56
GBP3-201ENST00000235878 ARAP1Q96P48 1450 aa11.52□□□□□ -0.57
GBP3-201ENST00000235878 APLP2Q06481 763 aa11.51□□□□□ -0.57
GBP3-201ENST00000235878 CADPSQ9ULU8 1353 aa11.49□□□□□ -0.57
GBP3-201ENST00000235878 DIEXFQ68CQ4 756 aaKnown RBP11.48□□□□□ -0.57
GBP3-201ENST00000235878 HNRNPUL2Q1KMD3 747 aaKnown RBP11.48□□□□□ -0.57
GBP3-201ENST00000235878 PRDM2Q13029 1718 aa11.48□□□□□ -0.57
GBP3-201ENST00000235878 HOXD11P31277 338 aaPredicted RBP11.47□□□□□ -0.57
GBP3-201ENST00000235878 IGF1RP08069 1367 aa11.46□□□□□ -0.58
GBP3-201ENST00000235878 ZNF316A6NFI3 1004 aaPredicted RBP11.45□□□□□ -0.58
GBP3-201ENST00000235878 RANGAP1P46060 587 aaPredicted RBP11.45□□□□□ -0.58
GBP3-201ENST00000235878 KANK4Q5T7N3 995 aaPredicted RBP11.43□□□□□ -0.58
GBP3-201ENST00000235878 ARHGAP35Q9NRY4 1499 aa11.42□□□□□ -0.58
GBP3-201ENST00000235878 RRBP1Q9P2E9 1410 aaKnown RBP11.4□□□□□ -0.58
GBP3-201ENST00000235878 CUX2O14529 1486 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms