RNA–Protein interactions for RNA: ENSMUST00000218866.1

Smc6-208, Transcript of Structural maintenance of chromosomes protein 6, mousemouse

TSL 1 (best) BASIC

Gene Smc6, Length 3,373 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc6-208ENSMUST00000218866 NischQ80TM9 1593 aa24.41■■□□□ 1.5
Smc6-208ENSMUST00000218866 Rhox8Q6VSS7 320 aa24.01■■□□□ 1.43
Smc6-208ENSMUST00000218866 Abcc9P70170 1546 aa23.54■■□□□ 1.36
Smc6-208ENSMUST00000218866 Gm35339A0A140LHH9 1649 aa23.16■■□□□ 1.3
Smc6-208ENSMUST00000218866 Abcc8B2RUS7 1588 aa22.94■■□□□ 1.26
Smc6-208ENSMUST00000218866 Ehmt2Q9Z148 1263 aaKnown RBP22.85■■□□□ 1.25
Smc6-208ENSMUST00000218866 Rtl1Q7M732 1744 aa22.8■■□□□ 1.24
Smc6-208ENSMUST00000218866 Rpgrip1Q9EPQ2 1331 aa22.79■■□□□ 1.24
Smc6-208ENSMUST00000218866 Ccdc180J3QNE4 1664 aa22.77■■□□□ 1.24
Smc6-208ENSMUST00000218866 Acin1Q9JIX8 1338 aaKnown RBP22.47■■□□□ 1.19
Smc6-208ENSMUST00000218866 Ccdc136Q3TVA9 1136 aa22.25■■□□□ 1.15
Smc6-208ENSMUST00000218866 Zcchc6Q5BLK4 1491 aaKnown RBP22.21■■□□□ 1.15
Smc6-208ENSMUST00000218866 Pcgf6Q99NA9 353 aa22.06■■□□□ 1.12
Smc6-208ENSMUST00000218866 HrcG5E8J6 738 aa21.96■■□□□ 1.11
Smc6-208ENSMUST00000218866 Trim41Q5NCC3 630 aa21.78■■□□□ 1.08
Smc6-208ENSMUST00000218866 Dcaf1Q80TR8 1506 aa21.73■■□□□ 1.07
Smc6-208ENSMUST00000218866 Supt5hO55201 1082 aaKnown RBP21.65■■□□□ 1.06
Smc6-208ENSMUST00000218866 Rb1cc1Q9ESK9 1588 aa21.42■■□□□ 1.02
Smc6-208ENSMUST00000218866 Zeb1Q64318 1117 aa21.38■■□□□ 1.01
Smc6-208ENSMUST00000218866 Gab3Q8BSM5 595 aa21.34■■□□□ 1.01
Smc6-208ENSMUST00000218866 Neurod1Q60867 357 aa21.27■■□□□ 1
Smc6-208ENSMUST00000218866 Cngb1E1AZ71 1325 aa21.17■□□□□ 0.98
Smc6-208ENSMUST00000218866 ScribQ80U72 1612 aa21.11■□□□□ 0.97
Smc6-208ENSMUST00000218866 Chic1Q8CBW7 227 aa21.08■□□□□ 0.97
Smc6-208ENSMUST00000218866 Cep164Q5DU05 1446 aa21.08■□□□□ 0.96
Smc6-208ENSMUST00000218866 Baz1aO88379 1555 aa21.07■□□□□ 0.96
Smc6-208ENSMUST00000218866 Mier1Q5UAK0 511 aa20.98■□□□□ 0.95
Smc6-208ENSMUST00000218866 Kdm5dQ62240 1548 aa20.94■□□□□ 0.94
Smc6-208ENSMUST00000218866 Sall2Q9QX96 1004 aa20.92■□□□□ 0.94
Smc6-208ENSMUST00000218866 NefmP08553 848 aa20.84■□□□□ 0.93
Smc6-208ENSMUST00000218866 Rsf1E9PWW9 1441 aaKnown RBP20.82■□□□□ 0.92
Smc6-208ENSMUST00000218866 Ppargc1bQ8VHJ7 1014 aa20.75■□□□□ 0.91
Smc6-208ENSMUST00000218866 Wdr66E9Q743 1299 aa20.72■□□□□ 0.91
Smc6-208ENSMUST00000218866 UbtfP25976 765 aaKnown RBP20.69■□□□□ 0.9
Smc6-208ENSMUST00000218866 Las1lA2BE28 776 aaKnown RBP20.67■□□□□ 0.9
Smc6-208ENSMUST00000218866 Csrnp3P59055 597 aa20.64■□□□□ 0.89
Smc6-208ENSMUST00000218866 Ccdc88bQ4QRL3 1481 aa20.62■□□□□ 0.89
Smc6-208ENSMUST00000218866 NacadQ5SWP3 1504 aa20.61■□□□□ 0.89
Smc6-208ENSMUST00000218866 Smarca2Q6DIC0 1577 aa20.6■□□□□ 0.89
Smc6-208ENSMUST00000218866 Esf1Q3V1V3 845 aaKnown RBP20.6■□□□□ 0.89
Smc6-208ENSMUST00000218866 1700123L14RikQ3V2K7 440 aa20.57■□□□□ 0.88
Smc6-208ENSMUST00000218866 Aebp2Q9Z248 504 aaKnown RBP20.57■□□□□ 0.88
Smc6-208ENSMUST00000218866 Anks4bQ8K3X6 423 aa20.49■□□□□ 0.87
Smc6-208ENSMUST00000218866 Myt1lP97500 1187 aa20.42■□□□□ 0.86
Smc6-208ENSMUST00000218866 Gm38655A0A286YDK6 273 aa20.37■□□□□ 0.85
Smc6-208ENSMUST00000218866 Cdk11bP24788 784 aaKnown RBP20.36■□□□□ 0.85
Smc6-208ENSMUST00000218866 Brd4Q9ESU6 1400 aaKnown RBP20.36■□□□□ 0.85
Smc6-208ENSMUST00000218866 Cecr2E9Q2Z1 1453 aa20.36■□□□□ 0.85
Smc6-208ENSMUST00000218866 Nop58Q6DFW4 536 aaKnown RBP20.35■□□□□ 0.85
Smc6-208ENSMUST00000218866 Golga3P55937 1487 aa20.34■□□□□ 0.85
Smc6-208ENSMUST00000218866 Crybg2B7ZCC2 1516 aa20.32■□□□□ 0.84
Smc6-208ENSMUST00000218866 ClspnQ80YR7 1315 aa20.21■□□□□ 0.83
Smc6-208ENSMUST00000218866 Sycp2Q9CUU3 1500 aa20.15■□□□□ 0.82
Smc6-208ENSMUST00000218866 Synj1Q8CHC4 1574 aa20.14■□□□□ 0.81
Smc6-208ENSMUST00000218866 Plekhg3Q4VAC9 1341 aa20.11■□□□□ 0.81
Smc6-208ENSMUST00000218866 TonslQ6NZL6 1363 aa20.11■□□□□ 0.81
Smc6-208ENSMUST00000218866 Npm2Q80W85 207 aa20.09■□□□□ 0.81
Smc6-208ENSMUST00000218866 Aplp2Q06335 707 aa20.02■□□□□ 0.8
Smc6-208ENSMUST00000218866 CenpbP27790 599 aa20.02■□□□□ 0.8
Smc6-208ENSMUST00000218866 Eid3Q3V124 375 aa19.95■□□□□ 0.78
Smc6-208ENSMUST00000218866 CftrP26361 1476 aa19.95■□□□□ 0.78
Smc6-208ENSMUST00000218866 Mapk8ip2Q9ERE9 830 aa19.89■□□□□ 0.78
Smc6-208ENSMUST00000218866 Ap3b1Q9Z1T1 1105 aa19.87■□□□□ 0.77
Smc6-208ENSMUST00000218866 Rapgef2Q8CHG7 1496 aa19.84■□□□□ 0.77
Smc6-208ENSMUST00000218866 Clip1Q922J3 1391 aa19.84■□□□□ 0.77
Smc6-208ENSMUST00000218866 Cep162Q6ZQ06 1403 aa19.83■□□□□ 0.77
Smc6-208ENSMUST00000218866 SafbD3YXK2 937 aaKnown RBP19.81■□□□□ 0.76
Smc6-208ENSMUST00000218866 Cc2d2aQ8CFW7 1633 aa19.79■□□□□ 0.76
Smc6-208ENSMUST00000218866 Hnrnpul2Q00PI9 745 aaKnown RBP19.77■□□□□ 0.75
Smc6-208ENSMUST00000218866 Top2bQ64511 1612 aa19.76■□□□□ 0.75
Smc6-208ENSMUST00000218866 BicraF8VPZ9 1578 aa19.67■□□□□ 0.74
Smc6-208ENSMUST00000218866 Fam71e1A1L3C1 212 aa19.65■□□□□ 0.74
Smc6-208ENSMUST00000218866 Il27Q8K3I6 234 aa19.63■□□□□ 0.73
Smc6-208ENSMUST00000218866 Fmn1Q05860 1466 aa19.61■□□□□ 0.73
Smc6-208ENSMUST00000218866 Myt1Q8CFC2 1127 aa19.6■□□□□ 0.73
Smc6-208ENSMUST00000218866 Cttnbp2B9EJA2 1648 aa19.58■□□□□ 0.72
Smc6-208ENSMUST00000218866 Top2aQ01320 1528 aaKnown RBP19.56■□□□□ 0.72
Smc6-208ENSMUST00000218866 Ncapd3Q6ZQK0 1506 aa19.54■□□□□ 0.72
Smc6-208ENSMUST00000218866 Fam50aQ9WV03 339 aaKnown RBP19.5■□□□□ 0.71
Smc6-208ENSMUST00000218866 NclP09405 707 aaKnown RBP19.49■□□□□ 0.71
Smc6-208ENSMUST00000218866 Tnnt3Q9QZ47 272 aa19.46■□□□□ 0.71
Smc6-208ENSMUST00000218866 Slc24a1Q91WD8 1130 aa19.43■□□□□ 0.7
Smc6-208ENSMUST00000218866 Lmod2Q3UHZ5 550 aa19.4■□□□□ 0.7
Smc6-208ENSMUST00000218866 Smarca4Q3TKT4 1613 aaKnown RBP19.39■□□□□ 0.69
Smc6-208ENSMUST00000218866 Setd5Q5XJV7 1441 aa19.37■□□□□ 0.69
Smc6-208ENSMUST00000218866 Eea1Q8BL66 1411 aa19.34■□□□□ 0.69
Smc6-208ENSMUST00000218866 Arap1Q4LDD4 1452 aa19.32■□□□□ 0.68
Smc6-208ENSMUST00000218866 PtprkP35822 1457 aa19.31■□□□□ 0.68
Smc6-208ENSMUST00000218866 BlmO88700 1416 aa19.29■□□□□ 0.68
Smc6-208ENSMUST00000218866 Arhgap35Q91YM2 1499 aa19.28■□□□□ 0.68
Smc6-208ENSMUST00000218866 Znf710Q3U288 666 aa19.28■□□□□ 0.68
Smc6-208ENSMUST00000218866 Hspa5P20029 655 aaKnown RBP19.25■□□□□ 0.67
Smc6-208ENSMUST00000218866 Ube2uB1AUC4 352 aa19.24■□□□□ 0.67
Smc6-208ENSMUST00000218866 DiexfQ8BTT6 772 aaKnown RBP19.24■□□□□ 0.67
Smc6-208ENSMUST00000218866 Rpap1Q80TE0 1409 aa19.24■□□□□ 0.67
Smc6-208ENSMUST00000218866 Anp32aO35381 247 aa19.21■□□□□ 0.67
Smc6-208ENSMUST00000218866 Stra8P70278 393 aa19.19■□□□□ 0.66
Smc6-208ENSMUST00000218866 Baz1bQ9Z277 1479 aa19.19■□□□□ 0.66
Smc6-208ENSMUST00000218866 Nolc1E9Q5C9 702 aaKnown RBP19.18■□□□□ 0.66
Smc6-208ENSMUST00000218866 Sin3aQ60520 1274 aaKnown RBP19.18■□□□□ 0.66
Retrieved 100 of 22,080 RNA–protein pairs in 7.8 ms