RNA–Protein interactions for RNA: ENSMUST00000201604.1

Gm42788-201, mousemouse

TSL 1 (best) BASIC

Gene Gm42788, Length 1,667 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm42788-201ENSMUST00000201604 Mapk8ip2Q9ERE9 830 aa16.24■□□□□ 0.19
Gm42788-201ENSMUST00000201604 Gm35339A0A140LHH9 1649 aa16.02■□□□□ 0.16
Gm42788-201ENSMUST00000201604 NischQ80TM9 1593 aa15.98■□□□□ 0.15
Gm42788-201ENSMUST00000201604 Rtl1Q7M732 1744 aa15.55■□□□□ 0.08
Gm42788-201ENSMUST00000201604 Abcc9P70170 1546 aa15.52■□□□□ 0.07
Gm42788-201ENSMUST00000201604 Abcc8B2RUS7 1588 aa15.34■□□□□ 0.05
Gm42788-201ENSMUST00000201604 Ccdc180J3QNE4 1664 aa15.19■□□□□ 0.02
Gm42788-201ENSMUST00000201604 Rpgrip1Q9EPQ2 1331 aa15.19■□□□□ 0.02
Gm42788-201ENSMUST00000201604 Chic1Q8CBW7 227 aa15□□□□□ -0.01
Gm42788-201ENSMUST00000201604 Zcchc6Q5BLK4 1491 aaKnown RBP14.65□□□□□ -0.06
Gm42788-201ENSMUST00000201604 ScribQ80U72 1612 aa14.63□□□□□ -0.07
Gm42788-201ENSMUST00000201604 Acin1Q9JIX8 1338 aaKnown RBP14.62□□□□□ -0.07
Gm42788-201ENSMUST00000201604 Rhox8Q6VSS7 320 aa14.52□□□□□ -0.09
Gm42788-201ENSMUST00000201604 Dcaf1Q80TR8 1506 aa14.43□□□□□ -0.1
Gm42788-201ENSMUST00000201604 Kdm5dQ62240 1548 aa14.21□□□□□ -0.13
Gm42788-201ENSMUST00000201604 Pcgf6Q99NA9 353 aa14.19□□□□□ -0.14
Gm42788-201ENSMUST00000201604 NacadQ5SWP3 1504 aa14.13□□□□□ -0.15
Gm42788-201ENSMUST00000201604 HrcG5E8J6 738 aa14.1□□□□□ -0.15
Gm42788-201ENSMUST00000201604 Rb1cc1Q9ESK9 1588 aa13.98□□□□□ -0.17
Gm42788-201ENSMUST00000201604 Trim41Q5NCC3 630 aa13.97□□□□□ -0.17
Gm42788-201ENSMUST00000201604 Plppr3Q7TPB0 716 aa13.9□□□□□ -0.18
Gm42788-201ENSMUST00000201604 Sycp2Q9CUU3 1500 aa13.85□□□□□ -0.19
Gm42788-201ENSMUST00000201604 Ehmt2Q9Z148 1263 aaKnown RBP13.85□□□□□ -0.19
Gm42788-201ENSMUST00000201604 Baz1aO88379 1555 aa13.78□□□□□ -0.2
Gm42788-201ENSMUST00000201604 Supt5hO55201 1082 aaKnown RBP13.76□□□□□ -0.21
Gm42788-201ENSMUST00000201604 Las1lA2BE28 776 aaKnown RBP13.69□□□□□ -0.22
Gm42788-201ENSMUST00000201604 Neurod1Q60867 357 aa13.67□□□□□ -0.22
Gm42788-201ENSMUST00000201604 Cep164Q5DU05 1446 aa13.67□□□□□ -0.22
Gm42788-201ENSMUST00000201604 BicraF8VPZ9 1578 aa13.64□□□□□ -0.23
Gm42788-201ENSMUST00000201604 Phf23Q8BSN5 401 aa13.59□□□□□ -0.23
Gm42788-201ENSMUST00000201604 Crybg2B7ZCC2 1516 aa13.59□□□□□ -0.23
Gm42788-201ENSMUST00000201604 Myt1Q8CFC2 1127 aa13.45□□□□□ -0.26
Gm42788-201ENSMUST00000201604 Smarca2Q6DIC0 1577 aa13.44□□□□□ -0.26
Gm42788-201ENSMUST00000201604 NefmP08553 848 aa13.42□□□□□ -0.26
Gm42788-201ENSMUST00000201604 Kcna4Q61423 654 aa13.41□□□□□ -0.26
Gm42788-201ENSMUST00000201604 Cngb1E1AZ71 1325 aa13.4□□□□□ -0.26
Gm42788-201ENSMUST00000201604 Ube2uB1AUC4 352 aa13.39□□□□□ -0.27
Gm42788-201ENSMUST00000201604 Anks4bQ8K3X6 423 aa13.39□□□□□ -0.27
Gm42788-201ENSMUST00000201604 Ccdc136Q3TVA9 1136 aa13.34□□□□□ -0.27
Gm42788-201ENSMUST00000201604 1700123L14RikQ3V2K7 440 aa13.34□□□□□ -0.27
Gm42788-201ENSMUST00000201604 Gab3Q8BSM5 595 aa13.31□□□□□ -0.28
Gm42788-201ENSMUST00000201604 Sall2Q9QX96 1004 aa13.28□□□□□ -0.28
Gm42788-201ENSMUST00000201604 Cecr2E9Q2Z1 1453 aa13.27□□□□□ -0.28
Gm42788-201ENSMUST00000201604 CenpbP27790 599 aa13.26□□□□□ -0.29
Gm42788-201ENSMUST00000201604 Aplp2Q06335 707 aa13.24□□□□□ -0.29
Gm42788-201ENSMUST00000201604 Zeb1Q64318 1117 aa13.24□□□□□ -0.29
Gm42788-201ENSMUST00000201604 Rsf1E9PWW9 1441 aaKnown RBP13.2□□□□□ -0.3
Gm42788-201ENSMUST00000201604 Csrnp3P59055 597 aa13.18□□□□□ -0.3
Gm42788-201ENSMUST00000201604 Mier1Q5UAK0 511 aa13.16□□□□□ -0.3
Gm42788-201ENSMUST00000201604 Smarca4Q3TKT4 1613 aaKnown RBP13.15□□□□□ -0.31
Gm42788-201ENSMUST00000201604 Pds5bQ4VA53 1446 aaKnown RBP13.1□□□□□ -0.31
Gm42788-201ENSMUST00000201604 Atad2bE9Q166 1460 aaKnown RBP13.07□□□□□ -0.32
Gm42788-201ENSMUST00000201604 Synj1Q8CHC4 1574 aa13.05□□□□□ -0.32
Gm42788-201ENSMUST00000201604 Iqgap2Q3UQ44 1575 aa13.03□□□□□ -0.32
Gm42788-201ENSMUST00000201604 ClspnQ80YR7 1315 aa13.03□□□□□ -0.32
Gm42788-201ENSMUST00000201604 Golga3P55937 1487 aa13.03□□□□□ -0.32
Gm42788-201ENSMUST00000201604 Brd4Q9ESU6 1400 aaKnown RBP13.02□□□□□ -0.32
Gm42788-201ENSMUST00000201604 Ccdc88bQ4QRL3 1481 aa13.01□□□□□ -0.33
Gm42788-201ENSMUST00000201604 Cdk11bP24788 784 aaKnown RBP13.01□□□□□ -0.33
Gm42788-201ENSMUST00000201604 CftrP26361 1476 aa12.99□□□□□ -0.33
Gm42788-201ENSMUST00000201604 Cttnbp2B9EJA2 1648 aa12.98□□□□□ -0.33
Gm42788-201ENSMUST00000201604 Top2bQ64511 1612 aa12.97□□□□□ -0.33
Gm42788-201ENSMUST00000201604 Nop58Q6DFW4 536 aaKnown RBP12.96□□□□□ -0.33
Gm42788-201ENSMUST00000201604 Thoc2B1AZI6 1594 aaKnown RBP12.92□□□□□ -0.34
Gm42788-201ENSMUST00000201604 Aebp2Q9Z248 504 aaKnown RBP12.9□□□□□ -0.34
Gm42788-201ENSMUST00000201604 Wdr66E9Q743 1299 aa12.87□□□□□ -0.35
Gm42788-201ENSMUST00000201604 DiexfQ8BTT6 772 aaKnown RBP12.86□□□□□ -0.35
Gm42788-201ENSMUST00000201604 Ercc6F8VPZ5 1481 aa12.86□□□□□ -0.35
Gm42788-201ENSMUST00000201604 Wdr62Q3U3T8 1523 aa12.86□□□□□ -0.35
Gm42788-201ENSMUST00000201604 Senp3Q9EP97 568 aaKnown RBP12.85□□□□□ -0.35
Gm42788-201ENSMUST00000201604 Rapgef2Q8CHG7 1496 aa12.84□□□□□ -0.35
Gm42788-201ENSMUST00000201604 Frmpd1A2AKB4 1549 aa12.84□□□□□ -0.35
Gm42788-201ENSMUST00000201604 GapdhsQ64467 440 aa12.79□□□□□ -0.36
Gm42788-201ENSMUST00000201604 Bcl11aQ9QYE3 773 aa12.77□□□□□ -0.36
Gm42788-201ENSMUST00000201604 Esf1Q3V1V3 845 aaKnown RBP12.77□□□□□ -0.37
Gm42788-201ENSMUST00000201604 Cc2d2aQ8CFW7 1633 aa12.76□□□□□ -0.37
Gm42788-201ENSMUST00000201604 Unc13aQ4KUS2 1712 aa12.74□□□□□ -0.37
Gm42788-201ENSMUST00000201604 Dnajc5bQ9CQ94 199 aa12.73□□□□□ -0.37
Gm42788-201ENSMUST00000201604 Eif4g1Q6NZJ6 1600 aaKnown RBP12.73□□□□□ -0.37
Gm42788-201ENSMUST00000201604 TonslQ6NZL6 1363 aa12.73□□□□□ -0.37
Gm42788-201ENSMUST00000201604 Ncapd3Q6ZQK0 1506 aa12.72□□□□□ -0.37
Gm42788-201ENSMUST00000201604 Top2aQ01320 1528 aaKnown RBP12.72□□□□□ -0.37
Gm42788-201ENSMUST00000201604 Tnnt3Q9QZ47 272 aa12.71□□□□□ -0.37
Gm42788-201ENSMUST00000201604 Fam135aQ6NS59 1506 aa12.68□□□□□ -0.38
Gm42788-201ENSMUST00000201604 Fam163aQ8CAA5 168 aa12.67□□□□□ -0.38
Gm42788-201ENSMUST00000201604 Gm38655A0A286YDK6 273 aa12.67□□□□□ -0.38
Gm42788-201ENSMUST00000201604 Kdm5bQ80Y84 1544 aa12.65□□□□□ -0.39
Gm42788-201ENSMUST00000201604 Cep162Q6ZQ06 1403 aa12.63□□□□□ -0.39
Gm42788-201ENSMUST00000201604 UbtfP25976 765 aaKnown RBP12.63□□□□□ -0.39
Gm42788-201ENSMUST00000201604 Phldb1Q6PDH0 1371 aaKnown RBP12.63□□□□□ -0.39
Gm42788-201ENSMUST00000201604 Fam71e1A1L3C1 212 aa12.62□□□□□ -0.39
Gm42788-201ENSMUST00000201604 Fmn1Q05860 1466 aa12.62□□□□□ -0.39
Gm42788-201ENSMUST00000201604 Ppargc1bQ8VHJ7 1014 aa12.61□□□□□ -0.39
Gm42788-201ENSMUST00000201604 TchhA0A0B4J1F9 1599 aa12.59□□□□□ -0.39
Gm42788-201ENSMUST00000201604 Hnrnpul2Q00PI9 745 aaKnown RBP12.56□□□□□ -0.4
Gm42788-201ENSMUST00000201604 Rtl5Q5DTT4 599 aa12.54□□□□□ -0.4
Gm42788-201ENSMUST00000201604 Lamc3Q9R0B6 1581 aa12.52□□□□□ -0.4
Gm42788-201ENSMUST00000201604 TnnQ80Z71 1560 aa12.52□□□□□ -0.41
Gm42788-201ENSMUST00000201604 Ubl4bQ9CQ84 188 aa12.51□□□□□ -0.41
Gm42788-201ENSMUST00000201604 Kif15Q6P9L6 1387 aa12.5□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 9.7 ms