RNA–Protein interactions for RNA: ENSMUST00000198898.1

Gm35066-201, mousemouse

TSL 1 (best) BASIC

Gene Gm35066, Length 2,074 nt, Biotype macro lncRNA, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm35066-201ENSMUST00000198898 Chic1Q8CBW7 227 aa18.1■□□□□ 0.49
Gm35066-201ENSMUST00000198898 Mapk8ip2Q9ERE9 830 aa17.81■□□□□ 0.44
Gm35066-201ENSMUST00000198898 Phf23Q8BSN5 401 aa16.13■□□□□ 0.17
Gm35066-201ENSMUST00000198898 Plppr3Q7TPB0 716 aa15.53■□□□□ 0.08
Gm35066-201ENSMUST00000198898 Gab3Q8BSM5 595 aa15.51■□□□□ 0.07
Gm35066-201ENSMUST00000198898 Senp3Q9EP97 568 aaKnown RBP14.74□□□□□ -0.05
Gm35066-201ENSMUST00000198898 Kcna4Q61423 654 aa13.93□□□□□ -0.18
Gm35066-201ENSMUST00000198898 Fam163aQ8CAA5 168 aa13.36□□□□□ -0.27
Gm35066-201ENSMUST00000198898 Trap1aP19473 224 aa13.18□□□□□ -0.3
Gm35066-201ENSMUST00000198898 Hoxd11P23813 323 aa13.07□□□□□ -0.32
Gm35066-201ENSMUST00000198898 Znf219Q6IQX8 726 aa12.69□□□□□ -0.38
Gm35066-201ENSMUST00000198898 Chrna2Q91X60 512 aa12.5□□□□□ -0.41
Gm35066-201ENSMUST00000198898 Dmrt2Q8BG36 561 aa12.42□□□□□ -0.42
Gm35066-201ENSMUST00000198898 Rsph4aQ8BYM7 716 aa12.4□□□□□ -0.42
Gm35066-201ENSMUST00000198898 ArsiQ32KI9 573 aa12.39□□□□□ -0.43
Gm35066-201ENSMUST00000198898 Rimbp2Q80U40 1072 aa12.16□□□□□ -0.46
Gm35066-201ENSMUST00000198898 Dnajc5bQ9CQ94 199 aa12.04□□□□□ -0.48
Gm35066-201ENSMUST00000198898 Ppargc1bQ8VHJ7 1014 aa12.02□□□□□ -0.48
Gm35066-201ENSMUST00000198898 Akt1s1Q9D1F4 257 aa11.99□□□□□ -0.49
Gm35066-201ENSMUST00000198898 Slc4a1apE9PX68 744 aa11.93□□□□□ -0.5
Gm35066-201ENSMUST00000198898 GapdhsQ64467 440 aa11.93□□□□□ -0.5
Gm35066-201ENSMUST00000198898 Ppp4r2Q0VGB7 417 aa11.87□□□□□ -0.51
Gm35066-201ENSMUST00000198898 Hs6st3Q9QYK4 470 aa11.84□□□□□ -0.51
Gm35066-201ENSMUST00000198898 Atf5O70191 283 aa11.82□□□□□ -0.52
Gm35066-201ENSMUST00000198898 Slc34a2Q9DBP0 697 aa11.79□□□□□ -0.52
Gm35066-201ENSMUST00000198898 Bach1P97302 739 aa11.46□□□□□ -0.57
Gm35066-201ENSMUST00000198898 1700123L14RikQ3V2K7 440 aa11.46□□□□□ -0.57
Gm35066-201ENSMUST00000198898 Sox12Q04890 314 aa11.44□□□□□ -0.58
Gm35066-201ENSMUST00000198898 Ube2uB1AUC4 352 aa11.29□□□□□ -0.6
Gm35066-201ENSMUST00000198898 WdpcpQ8C456 722 aa11.17□□□□□ -0.62
Gm35066-201ENSMUST00000198898 Znf704Q9ERQ3 566 aa11.07□□□□□ -0.64
Gm35066-201ENSMUST00000198898 Ifnlr1Q8CGK5 535 aa11.03□□□□□ -0.64
Gm35066-201ENSMUST00000198898 Slc4a5E9Q3M5 1116 aa11.01□□□□□ -0.65
Gm35066-201ENSMUST00000198898 Grwd1Q810D6 446 aaKnown RBP10.95□□□□□ -0.66
Gm35066-201ENSMUST00000198898 Egfem1Q8C088 590 aa10.92□□□□□ -0.66
Gm35066-201ENSMUST00000198898 G430095P16RikE9Q913 147 aa10.88□□□□□ -0.67
Gm35066-201ENSMUST00000198898 Zbtb7aO88939 569 aaKnown RBP10.85□□□□□ -0.67
Gm35066-201ENSMUST00000198898 C1qtnf12Q8R2Z0 308 aa10.81□□□□□ -0.68
Gm35066-201ENSMUST00000198898 Cdca7Q9D0M2 382 aa10.74□□□□□ -0.69
Gm35066-201ENSMUST00000198898 Zbtb12Q9Z150 459 aa10.72□□□□□ -0.69
Gm35066-201ENSMUST00000198898 Rnf216P58283 853 aa10.71□□□□□ -0.69
Gm35066-201ENSMUST00000198898 Nlrp6Q91WS2 869 aa10.7□□□□□ -0.7
Gm35066-201ENSMUST00000198898 Fam71e1A1L3C1 212 aa10.68□□□□□ -0.7
Gm35066-201ENSMUST00000198898 Abcb7Q61102 752 aaKnown RBP10.67□□□□□ -0.7
Gm35066-201ENSMUST00000198898 Trim41Q5NCC3 630 aa10.6□□□□□ -0.71
Gm35066-201ENSMUST00000198898 Npm2Q80W85 207 aa10.59□□□□□ -0.71
Gm35066-201ENSMUST00000198898 Riok3Q9DBU3 519 aaKnown RBP10.57□□□□□ -0.72
Gm35066-201ENSMUST00000198898 Gtpbp6Q3U6U5 514 aa10.54□□□□□ -0.72
Gm35066-201ENSMUST00000198898 Ms4a5Q810P8 197 aa10.51□□□□□ -0.73
Gm35066-201ENSMUST00000198898 Nkx1-1G3UXB3 402 aa10.5□□□□□ -0.73
Gm35066-201ENSMUST00000198898 MyclP10166 368 aa10.5□□□□□ -0.73
Gm35066-201ENSMUST00000198898 AcrbpQ3V140 540 aa10.48□□□□□ -0.73
Gm35066-201ENSMUST00000198898 Prm3Q62100 101 aa10.39□□□□□ -0.75
Gm35066-201ENSMUST00000198898 Kcnn1Q9EQR3 537 aa10.37□□□□□ -0.75
Gm35066-201ENSMUST00000198898 Prr29B1ARI9 187 aa10.34□□□□□ -0.75
Gm35066-201ENSMUST00000198898 Pde4cQ3UEI1 686 aa10.34□□□□□ -0.75
Gm35066-201ENSMUST00000198898 Cacnb1Q8R3Z5 597 aa10.31□□□□□ -0.76
Gm35066-201ENSMUST00000198898 Znf703P0CL69 594 aa10.29□□□□□ -0.76
Gm35066-201ENSMUST00000198898 Fbln2P37889 1221 aa10.27□□□□□ -0.77
Gm35066-201ENSMUST00000198898 Ehmt2Q9Z148 1263 aaKnown RBP10.27□□□□□ -0.77
Gm35066-201ENSMUST00000198898 Styxl1Q9DAR2 321 aa10.19□□□□□ -0.78
Gm35066-201ENSMUST00000198898 Rtn4Q99P72 1162 aaKnown RBP10.19□□□□□ -0.78
Gm35066-201ENSMUST00000198898 Ildr2B5TVM2 661 aa10.16□□□□□ -0.78
Gm35066-201ENSMUST00000198898 Skida1Q80YR3 822 aa10.14□□□□□ -0.79
Gm35066-201ENSMUST00000198898 MpndQ3TV65 487 aa10.13□□□□□ -0.79
Gm35066-201ENSMUST00000198898 Npm3Q9CPP0 175 aaKnown RBP10.12□□□□□ -0.79
Gm35066-201ENSMUST00000198898 Clcn6O35454 870 aa10.06□□□□□ -0.8
Gm35066-201ENSMUST00000198898 Pitpnm1O35954 1243 aa10.05□□□□□ -0.8
Gm35066-201ENSMUST00000198898 Tshz2Q68FE9 1030 aa10.02□□□□□ -0.81
Gm35066-201ENSMUST00000198898 Kank3Q9Z1P7 791 aa10.02□□□□□ -0.81
Gm35066-201ENSMUST00000198898 Pip4p2Q9CZX7 257 aa9.99□□□□□ -0.81
Gm35066-201ENSMUST00000198898 Trim35Q8C006 501 aa9.97□□□□□ -0.81
Gm35066-201ENSMUST00000198898 NischQ80TM9 1593 aa9.89□□□□□ -0.83
Gm35066-201ENSMUST00000198898 Rpgrip1Q9EPQ2 1331 aa9.79□□□□□ -0.84
Gm35066-201ENSMUST00000198898 Cadps2Q8BYR5 1297 aa9.79□□□□□ -0.84
Gm35066-201ENSMUST00000198898 Tcf3P15806 651 aa9.78□□□□□ -0.84
Gm35066-201ENSMUST00000198898 Lrrc43Q3V0L5 667 aa9.77□□□□□ -0.85
Gm35066-201ENSMUST00000198898 Ecm2Q5FW85 670 aa9.74□□□□□ -0.85
Gm35066-201ENSMUST00000198898 Nyap1Q6PFX7 833 aa9.74□□□□□ -0.85
Gm35066-201ENSMUST00000198898 DiexfQ8BTT6 772 aaKnown RBP9.73□□□□□ -0.85
Gm35066-201ENSMUST00000198898 Jarid2Q62315 1234 aa9.73□□□□□ -0.85
Gm35066-201ENSMUST00000198898 Ppp1r37Q8BKR5 712 aa9.72□□□□□ -0.85
Gm35066-201ENSMUST00000198898 Rtl1Q7M732 1744 aa9.71□□□□□ -0.86
Gm35066-201ENSMUST00000198898 Prdm10Q3UTQ7 1184 aa9.7□□□□□ -0.86
Gm35066-201ENSMUST00000198898 Hnrnpul2Q00PI9 745 aaKnown RBP9.65□□□□□ -0.86
Gm35066-201ENSMUST00000198898 Abcc9P70170 1546 aa9.64□□□□□ -0.87
Gm35066-201ENSMUST00000198898 Dok7Q18PE0 504 aa9.64□□□□□ -0.87
Gm35066-201ENSMUST00000198898 SnphQ80U23 495 aa9.63□□□□□ -0.87
Gm35066-201ENSMUST00000198898 Ccdc180J3QNE4 1664 aa9.6□□□□□ -0.87
Gm35066-201ENSMUST00000198898 Gm35339A0A140LHH9 1649 aa9.57□□□□□ -0.88
Gm35066-201ENSMUST00000198898 Foxp4Q9DBY0 795 aaKnown RBP9.52□□□□□ -0.88
Gm35066-201ENSMUST00000198898 Ttbk1Q6PCN3 1308 aa9.5□□□□□ -0.89
Gm35066-201ENSMUST00000198898 Sra1Q80VJ2 232 aa9.48□□□□□ -0.89
Gm35066-201ENSMUST00000198898 Rhox8Q6VSS7 320 aa9.47□□□□□ -0.89
Gm35066-201ENSMUST00000198898 MycnP03966 462 aaKnown RBP9.46□□□□□ -0.9
Gm35066-201ENSMUST00000198898 Hdac5Q9Z2V6 1113 aa9.45□□□□□ -0.9
Gm35066-201ENSMUST00000198898 Acin1Q9JIX8 1338 aaKnown RBP9.42□□□□□ -0.9
Gm35066-201ENSMUST00000198898 ArntlQ9WTL8 632 aa9.41□□□□□ -0.9
Gm35066-201ENSMUST00000198898 Gjc2Q8BQU6 440 aa9.38□□□□□ -0.91
Gm35066-201ENSMUST00000198898 Gm13697A2AK42 830 aa9.35□□□□□ -0.91
Retrieved 100 of 22,080 RNA–protein pairs in 172.2 ms