RNA–Protein interactions for RNA: ENSMUST00000193174.5

Pcdh15-236, Transcript of Protocadherin-15, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Pcdh15, Length 5,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15-236ENSMUST00000193174 Rhox8Q6VSS7 320 aa15.13■□□□□ 0.01
Pcdh15-236ENSMUST00000193174 Esf1Q3V1V3 845 aaKnown RBP13.46□□□□□ -0.25
Pcdh15-236ENSMUST00000193174 Ccdc136Q3TVA9 1136 aa13.42□□□□□ -0.26
Pcdh15-236ENSMUST00000193174 Cngb1E1AZ71 1325 aa13.34□□□□□ -0.27
Pcdh15-236ENSMUST00000193174 Rpgrip1Q9EPQ2 1331 aa13.21□□□□□ -0.29
Pcdh15-236ENSMUST00000193174 NischQ80TM9 1593 aa13.2□□□□□ -0.3
Pcdh15-236ENSMUST00000193174 Ehmt2Q9Z148 1263 aaKnown RBP13.2□□□□□ -0.3
Pcdh15-236ENSMUST00000193174 Trim41Q5NCC3 630 aa13.19□□□□□ -0.3
Pcdh15-236ENSMUST00000193174 Zeb1Q64318 1117 aa13.19□□□□□ -0.3
Pcdh15-236ENSMUST00000193174 Npm2Q80W85 207 aa13.1□□□□□ -0.31
Pcdh15-236ENSMUST00000193174 Ube2uB1AUC4 352 aa13.09□□□□□ -0.31
Pcdh15-236ENSMUST00000193174 Gab3Q8BSM5 595 aa13.08□□□□□ -0.32
Pcdh15-236ENSMUST00000193174 Abcc9P70170 1546 aa13□□□□□ -0.33
Pcdh15-236ENSMUST00000193174 Las1lA2BE28 776 aaKnown RBP12.94□□□□□ -0.34
Pcdh15-236ENSMUST00000193174 Myt1lP97500 1187 aa12.94□□□□□ -0.34
Pcdh15-236ENSMUST00000193174 Wdr66E9Q743 1299 aa12.89□□□□□ -0.35
Pcdh15-236ENSMUST00000193174 Gm35339A0A140LHH9 1649 aa12.72□□□□□ -0.37
Pcdh15-236ENSMUST00000193174 Ttbk1Q6PCN3 1308 aa12.66□□□□□ -0.38
Pcdh15-236ENSMUST00000193174 Il27Q8K3I6 234 aa12.64□□□□□ -0.39
Pcdh15-236ENSMUST00000193174 Pelp1Q9DBD5 1123 aaKnown RBP12.63□□□□□ -0.39
Pcdh15-236ENSMUST00000193174 UbtfP25976 765 aaKnown RBP12.53□□□□□ -0.4
Pcdh15-236ENSMUST00000193174 Zcchc6Q5BLK4 1491 aaKnown RBP12.45□□□□□ -0.42
Pcdh15-236ENSMUST00000193174 NefmP08553 848 aa12.4□□□□□ -0.42
Pcdh15-236ENSMUST00000193174 Npm1Q61937 292 aaKnown RBP12.38□□□□□ -0.43
Pcdh15-236ENSMUST00000193174 HrcG5E8J6 738 aa12.38□□□□□ -0.43
Pcdh15-236ENSMUST00000193174 Plppr3Q7TPB0 716 aa12.38□□□□□ -0.43
Pcdh15-236ENSMUST00000193174 Ifnlr1Q8CGK5 535 aa12.3□□□□□ -0.44
Pcdh15-236ENSMUST00000193174 Ap3b1Q9Z1T1 1105 aa12.28□□□□□ -0.44
Pcdh15-236ENSMUST00000193174 Acin1Q9JIX8 1338 aaKnown RBP12.27□□□□□ -0.45
Pcdh15-236ENSMUST00000193174 Stra8P70278 393 aa12.26□□□□□ -0.45
Pcdh15-236ENSMUST00000193174 Ccdc180J3QNE4 1664 aa12.26□□□□□ -0.45
Pcdh15-236ENSMUST00000193174 Amer1Q7TS75 1132 aa12.26□□□□□ -0.45
Pcdh15-236ENSMUST00000193174 Fam50aQ9WV03 339 aaKnown RBP12.25□□□□□ -0.45
Pcdh15-236ENSMUST00000193174 Slc24a1Q91WD8 1130 aa12.23□□□□□ -0.45
Pcdh15-236ENSMUST00000193174 Gm13697A2AK42 830 aa12.22□□□□□ -0.45
Pcdh15-236ENSMUST00000193174 Ubl4bQ9CQ84 188 aa12.21□□□□□ -0.46
Pcdh15-236ENSMUST00000193174 Abcc8B2RUS7 1588 aa12.19□□□□□ -0.46
Pcdh15-236ENSMUST00000193174 Os9Q8K2C7 672 aa12.16□□□□□ -0.46
Pcdh15-236ENSMUST00000193174 Neurod1Q60867 357 aa12.14□□□□□ -0.47
Pcdh15-236ENSMUST00000193174 Anp32bQ9EST5 272 aaKnown RBP12.13□□□□□ -0.47
Pcdh15-236ENSMUST00000193174 Rtl1Q7M732 1744 aa12.09□□□□□ -0.47
Pcdh15-236ENSMUST00000193174 NclP09405 707 aaKnown RBP12.07□□□□□ -0.48
Pcdh15-236ENSMUST00000193174 NrdcQ8BHG1 1161 aa12.04□□□□□ -0.48
Pcdh15-236ENSMUST00000193174 Safb2Q80YR5 991 aaKnown RBP12.03□□□□□ -0.48
Pcdh15-236ENSMUST00000193174 CenpbP27790 599 aa12.01□□□□□ -0.49
Pcdh15-236ENSMUST00000193174 Lmod2Q3UHZ5 550 aa11.96□□□□□ -0.49
Pcdh15-236ENSMUST00000193174 Zbtb7cQ8VCZ7 619 aa11.95□□□□□ -0.5
Pcdh15-236ENSMUST00000193174 Cdk11bP24788 784 aaKnown RBP11.93□□□□□ -0.5
Pcdh15-236ENSMUST00000193174 Hnrnpul2Q00PI9 745 aaKnown RBP11.92□□□□□ -0.5
Pcdh15-236ENSMUST00000193174 Fkbp15Q6P9Q6 1216 aaKnown RBP11.9□□□□□ -0.5
Pcdh15-236ENSMUST00000193174 TonslQ6NZL6 1363 aa11.88□□□□□ -0.51
Pcdh15-236ENSMUST00000193174 Gm13695A2AK44 830 aa11.87□□□□□ -0.51
Pcdh15-236ENSMUST00000193174 NeflP08551 543 aa11.87□□□□□ -0.51
Pcdh15-236ENSMUST00000193174 4930567H17RikQ3V0K5 233 aa11.84□□□□□ -0.51
Pcdh15-236ENSMUST00000193174 Plekhg3Q4VAC9 1341 aa11.84□□□□□ -0.51
Pcdh15-236ENSMUST00000193174 Ercc6F8VPZ5 1481 aa11.84□□□□□ -0.51
Pcdh15-236ENSMUST00000193174 Brd4Q9ESU6 1400 aaKnown RBP11.83□□□□□ -0.52
Pcdh15-236ENSMUST00000193174 Eif5bQ05D44 1216 aaKnown RBP11.81□□□□□ -0.52
Pcdh15-236ENSMUST00000193174 Nop58Q6DFW4 536 aaKnown RBP11.8□□□□□ -0.52
Pcdh15-236ENSMUST00000193174 Ppargc1bQ8VHJ7 1014 aa11.8□□□□□ -0.52
Pcdh15-236ENSMUST00000193174 Tnnt3Q9QZ47 272 aa11.79□□□□□ -0.52
Pcdh15-236ENSMUST00000193174 Mier1Q5UAK0 511 aa11.78□□□□□ -0.52
Pcdh15-236ENSMUST00000193174 Erich6D3Z6S9 713 aa11.77□□□□□ -0.53
Pcdh15-236ENSMUST00000193174 Atp1b4Q99ME6 356 aa11.76□□□□□ -0.53
Pcdh15-236ENSMUST00000193174 MyclP10166 368 aa11.75□□□□□ -0.53
Pcdh15-236ENSMUST00000193174 4933416C03RikQ3V063 378 aa11.73□□□□□ -0.53
Pcdh15-236ENSMUST00000193174 Ppp1r18Q8BQ30 594 aa11.73□□□□□ -0.53
Pcdh15-236ENSMUST00000193174 Hdac5Q9Z2V6 1113 aa11.72□□□□□ -0.53
Pcdh15-236ENSMUST00000193174 Chic1Q8CBW7 227 aa11.7□□□□□ -0.54
Pcdh15-236ENSMUST00000193174 Pcgf6Q99NA9 353 aa11.69□□□□□ -0.54
Pcdh15-236ENSMUST00000193174 Dcaf1Q80TR8 1506 aa11.68□□□□□ -0.54
Pcdh15-236ENSMUST00000193174 Zbtb4Q5F293 982 aa11.67□□□□□ -0.54
Pcdh15-236ENSMUST00000193174 MlecQ6ZQI3 291 aaKnown RBP11.67□□□□□ -0.54
Pcdh15-236ENSMUST00000193174 Clip1Q922J3 1391 aa11.67□□□□□ -0.54
Pcdh15-236ENSMUST00000193174 Rb1cc1Q9ESK9 1588 aa11.62□□□□□ -0.55
Pcdh15-236ENSMUST00000193174 Nlrp6Q91WS2 869 aa11.61□□□□□ -0.55
Pcdh15-236ENSMUST00000193174 NacadQ5SWP3 1504 aa11.6□□□□□ -0.55
Pcdh15-236ENSMUST00000193174 Prdm10Q3UTQ7 1184 aa11.58□□□□□ -0.56
Pcdh15-236ENSMUST00000193174 Supt5hO55201 1082 aaKnown RBP11.57□□□□□ -0.56
Pcdh15-236ENSMUST00000193174 Ccer2J3QPU5 274 aa11.56□□□□□ -0.56
Pcdh15-236ENSMUST00000193174 Eid3Q3V124 375 aa11.55□□□□□ -0.56
Pcdh15-236ENSMUST00000193174 Pds5bQ4VA53 1446 aaKnown RBP11.54□□□□□ -0.56
Pcdh15-236ENSMUST00000193174 Cep164Q5DU05 1446 aa11.54□□□□□ -0.56
Pcdh15-236ENSMUST00000193174 ClspnQ80YR7 1315 aa11.51□□□□□ -0.57
Pcdh15-236ENSMUST00000193174 Pabpn1Q8CCS6 302 aaKnown RBP11.51□□□□□ -0.57
Pcdh15-236ENSMUST00000193174 Clstn2Q9ER65 966 aa11.49□□□□□ -0.57
Pcdh15-236ENSMUST00000193174 Chic2Q9D9G3 165 aa11.48□□□□□ -0.57
Pcdh15-236ENSMUST00000193174 Polr3glQ8R0C0 218 aa11.46□□□□□ -0.58
Pcdh15-236ENSMUST00000193174 Kif15Q6P9L6 1387 aa11.45□□□□□ -0.58
Pcdh15-236ENSMUST00000193174 Rsf1E9PWW9 1441 aaKnown RBP11.45□□□□□ -0.58
Pcdh15-236ENSMUST00000193174 BlmO88700 1416 aa11.45□□□□□ -0.58
Pcdh15-236ENSMUST00000193174 Mapk8ip2Q9ERE9 830 aa11.44□□□□□ -0.58
Pcdh15-236ENSMUST00000193174 Ggt6Q6PDE7 497 aa11.43□□□□□ -0.58
Pcdh15-236ENSMUST00000193174 Ecm2Q5FW85 670 aa11.42□□□□□ -0.58
Pcdh15-236ENSMUST00000193174 DiexfQ8BTT6 772 aaKnown RBP11.42□□□□□ -0.58
Pcdh15-236ENSMUST00000193174 Setd5Q5XJV7 1441 aa11.39□□□□□ -0.59
Pcdh15-236ENSMUST00000193174 Arhgap27A2AB59 869 aa11.36□□□□□ -0.59
Pcdh15-236ENSMUST00000193174 P3h3Q8CG70 732 aa11.36□□□□□ -0.59
Pcdh15-236ENSMUST00000193174 Ccdc18Q640L5 1455 aa11.35□□□□□ -0.59
Pcdh15-236ENSMUST00000193174 Baz1aO88379 1555 aa11.32□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 38.8 ms