RNA–Protein interactions for RNA: ENSMUST00000192535.1

Pcdhgb5-201, Transcript of Protocadherin gamma B5, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhgb5, Length 4,670 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5-201ENSMUST00000192535 Rhox8Q6VSS7 320 aa21.28■■□□□ 1
Pcdhgb5-201ENSMUST00000192535 Ehmt2Q9Z148 1263 aaKnown RBP19.01■□□□□ 0.63
Pcdhgb5-201ENSMUST00000192535 Ccdc136Q3TVA9 1136 aa18.87■□□□□ 0.61
Pcdhgb5-201ENSMUST00000192535 Rpgrip1Q9EPQ2 1331 aa18.75■□□□□ 0.59
Pcdhgb5-201ENSMUST00000192535 Esf1Q3V1V3 845 aaKnown RBP18.74■□□□□ 0.59
Pcdhgb5-201ENSMUST00000192535 Cngb1E1AZ71 1325 aa18.65■□□□□ 0.58
Pcdhgb5-201ENSMUST00000192535 Gab3Q8BSM5 595 aa18.5■□□□□ 0.55
Pcdhgb5-201ENSMUST00000192535 NischQ80TM9 1593 aa18.47■□□□□ 0.55
Pcdhgb5-201ENSMUST00000192535 Ube2uB1AUC4 352 aa18.44■□□□□ 0.54
Pcdhgb5-201ENSMUST00000192535 Zeb1Q64318 1117 aa18.43■□□□□ 0.54
Pcdhgb5-201ENSMUST00000192535 Wdr66E9Q743 1299 aa18.39■□□□□ 0.53
Pcdhgb5-201ENSMUST00000192535 Trim41Q5NCC3 630 aa18.32■□□□□ 0.52
Pcdhgb5-201ENSMUST00000192535 Las1lA2BE28 776 aaKnown RBP18.3■□□□□ 0.52
Pcdhgb5-201ENSMUST00000192535 Npm2Q80W85 207 aa18.3■□□□□ 0.52
Pcdhgb5-201ENSMUST00000192535 Myt1lP97500 1187 aa18.21■□□□□ 0.51
Pcdhgb5-201ENSMUST00000192535 UbtfP25976 765 aaKnown RBP17.75■□□□□ 0.43
Pcdhgb5-201ENSMUST00000192535 Pelp1Q9DBD5 1123 aaKnown RBP17.74■□□□□ 0.43
Pcdhgb5-201ENSMUST00000192535 Il27Q8K3I6 234 aa17.66■□□□□ 0.42
Pcdhgb5-201ENSMUST00000192535 Abcc9P70170 1546 aa17.59■□□□□ 0.41
Pcdhgb5-201ENSMUST00000192535 NefmP08553 848 aa17.51■□□□□ 0.39
Pcdhgb5-201ENSMUST00000192535 Slc24a1Q91WD8 1130 aa17.5■□□□□ 0.39
Pcdhgb5-201ENSMUST00000192535 Acin1Q9JIX8 1338 aaKnown RBP17.48■□□□□ 0.39
Pcdhgb5-201ENSMUST00000192535 CenpbP27790 599 aa17.35■□□□□ 0.37
Pcdhgb5-201ENSMUST00000192535 Gm35339A0A140LHH9 1649 aa17.33■□□□□ 0.37
Pcdhgb5-201ENSMUST00000192535 Abcc8B2RUS7 1588 aa17.3■□□□□ 0.36
Pcdhgb5-201ENSMUST00000192535 Stra8P70278 393 aa17.29■□□□□ 0.36
Pcdhgb5-201ENSMUST00000192535 HrcG5E8J6 738 aa17.28■□□□□ 0.36
Pcdhgb5-201ENSMUST00000192535 Ap3b1Q9Z1T1 1105 aa17.27■□□□□ 0.36
Pcdhgb5-201ENSMUST00000192535 Fam50aQ9WV03 339 aaKnown RBP17.27■□□□□ 0.35
Pcdhgb5-201ENSMUST00000192535 Amer1Q7TS75 1132 aa17.26■□□□□ 0.35
Pcdhgb5-201ENSMUST00000192535 Neurod1Q60867 357 aa17.2■□□□□ 0.34
Pcdhgb5-201ENSMUST00000192535 Zcchc6Q5BLK4 1491 aaKnown RBP17.17■□□□□ 0.34
Pcdhgb5-201ENSMUST00000192535 NclP09405 707 aaKnown RBP17.07■□□□□ 0.32
Pcdhgb5-201ENSMUST00000192535 Ppargc1bQ8VHJ7 1014 aa17.07■□□□□ 0.32
Pcdhgb5-201ENSMUST00000192535 Cdk11bP24788 784 aaKnown RBP17.06■□□□□ 0.32
Pcdhgb5-201ENSMUST00000192535 Os9Q8K2C7 672 aa17.04■□□□□ 0.32
Pcdhgb5-201ENSMUST00000192535 NrdcQ8BHG1 1161 aa17.02■□□□□ 0.32
Pcdhgb5-201ENSMUST00000192535 Anp32bQ9EST5 272 aaKnown RBP17.01■□□□□ 0.31
Pcdhgb5-201ENSMUST00000192535 Myt1Q8CFC2 1127 aa16.96■□□□□ 0.3
Pcdhgb5-201ENSMUST00000192535 Ccdc180J3QNE4 1664 aa16.92■□□□□ 0.3
Pcdhgb5-201ENSMUST00000192535 Pcgf6Q99NA9 353 aa16.91■□□□□ 0.3
Pcdhgb5-201ENSMUST00000192535 Nop58Q6DFW4 536 aaKnown RBP16.89■□□□□ 0.29
Pcdhgb5-201ENSMUST00000192535 Eif5bQ05D44 1216 aaKnown RBP16.88■□□□□ 0.29
Pcdhgb5-201ENSMUST00000192535 Zbtb7cQ8VCZ7 619 aa16.85■□□□□ 0.29
Pcdhgb5-201ENSMUST00000192535 Npm1Q61937 292 aaKnown RBP16.83■□□□□ 0.29
Pcdhgb5-201ENSMUST00000192535 Lmod2Q3UHZ5 550 aa16.83■□□□□ 0.28
Pcdhgb5-201ENSMUST00000192535 NeflP08551 543 aa16.78■□□□□ 0.28
Pcdhgb5-201ENSMUST00000192535 TonslQ6NZL6 1363 aa16.78■□□□□ 0.28
Pcdhgb5-201ENSMUST00000192535 Ttbk1Q6PCN3 1308 aa16.77■□□□□ 0.28
Pcdhgb5-201ENSMUST00000192535 Hnrnpul2Q00PI9 745 aaKnown RBP16.72■□□□□ 0.27
Pcdhgb5-201ENSMUST00000192535 Tnnt3Q9QZ47 272 aa16.71■□□□□ 0.27
Pcdhgb5-201ENSMUST00000192535 Plekhg3Q4VAC9 1341 aa16.71■□□□□ 0.27
Pcdhgb5-201ENSMUST00000192535 Mier1Q5UAK0 511 aa16.7■□□□□ 0.26
Pcdhgb5-201ENSMUST00000192535 Ifnlr1Q8CGK5 535 aa16.7■□□□□ 0.26
Pcdhgb5-201ENSMUST00000192535 Supt5hO55201 1082 aaKnown RBP16.7■□□□□ 0.26
Pcdhgb5-201ENSMUST00000192535 4933416C03RikQ3V063 378 aa16.64■□□□□ 0.25
Pcdhgb5-201ENSMUST00000192535 Gm13697A2AK42 830 aa16.6■□□□□ 0.25
Pcdhgb5-201ENSMUST00000192535 Zbtb4Q5F293 982 aa16.59■□□□□ 0.25
Pcdhgb5-201ENSMUST00000192535 Chic1Q8CBW7 227 aa16.54■□□□□ 0.24
Pcdhgb5-201ENSMUST00000192535 DiexfQ8BTT6 772 aaKnown RBP16.53■□□□□ 0.24
Pcdhgb5-201ENSMUST00000192535 Fkbp15Q6P9Q6 1216 aaKnown RBP16.51■□□□□ 0.23
Pcdhgb5-201ENSMUST00000192535 Erich6D3Z6S9 713 aa16.49■□□□□ 0.23
Pcdhgb5-201ENSMUST00000192535 4930567H17RikQ3V0K5 233 aa16.49■□□□□ 0.23
Pcdhgb5-201ENSMUST00000192535 Rtl1Q7M732 1744 aa16.48■□□□□ 0.23
Pcdhgb5-201ENSMUST00000192535 Eid3Q3V124 375 aa16.48■□□□□ 0.23
Pcdhgb5-201ENSMUST00000192535 Prdm10Q3UTQ7 1184 aa16.45■□□□□ 0.22
Pcdhgb5-201ENSMUST00000192535 Atp1b4Q99ME6 356 aa16.45■□□□□ 0.22
Pcdhgb5-201ENSMUST00000192535 Mapk8ip2Q9ERE9 830 aa16.44■□□□□ 0.22
Pcdhgb5-201ENSMUST00000192535 Plppr3Q7TPB0 716 aa16.36■□□□□ 0.21
Pcdhgb5-201ENSMUST00000192535 ClspnQ80YR7 1315 aa16.33■□□□□ 0.21
Pcdhgb5-201ENSMUST00000192535 Gm13695A2AK44 830 aa16.32■□□□□ 0.2
Pcdhgb5-201ENSMUST00000192535 Clip1Q922J3 1391 aa16.29■□□□□ 0.2
Pcdhgb5-201ENSMUST00000192535 Nlrp6Q91WS2 869 aa16.29■□□□□ 0.2
Pcdhgb5-201ENSMUST00000192535 Ubl4bQ9CQ84 188 aa16.26■□□□□ 0.19
Pcdhgb5-201ENSMUST00000192535 Polr3glQ8R0C0 218 aa16.25■□□□□ 0.19
Pcdhgb5-201ENSMUST00000192535 NacadQ5SWP3 1504 aa16.23■□□□□ 0.19
Pcdhgb5-201ENSMUST00000192535 Brd4Q9ESU6 1400 aaKnown RBP16.22■□□□□ 0.19
Pcdhgb5-201ENSMUST00000192535 Rb1cc1Q9ESK9 1588 aa16.18■□□□□ 0.18
Pcdhgb5-201ENSMUST00000192535 Rtl5Q5DTT4 599 aa16.18■□□□□ 0.18
Pcdhgb5-201ENSMUST00000192535 Chic2Q9D9G3 165 aa16.15■□□□□ 0.18
Pcdhgb5-201ENSMUST00000192535 Sall2Q9QX96 1004 aa16.12■□□□□ 0.17
Pcdhgb5-201ENSMUST00000192535 Dcaf1Q80TR8 1506 aa16.1■□□□□ 0.17
Pcdhgb5-201ENSMUST00000192535 Hdac5Q9Z2V6 1113 aa16.1■□□□□ 0.17
Pcdhgb5-201ENSMUST00000192535 DaxxO35613 739 aa16.09■□□□□ 0.17
Pcdhgb5-201ENSMUST00000192535 Anp32aO35381 247 aa16.08■□□□□ 0.16
Pcdhgb5-201ENSMUST00000192535 Csrnp3P59055 597 aa16.08■□□□□ 0.16
Pcdhgb5-201ENSMUST00000192535 Ccer2J3QPU5 274 aa16.07■□□□□ 0.16
Pcdhgb5-201ENSMUST00000192535 ArxO35085 564 aa16.06■□□□□ 0.16
Pcdhgb5-201ENSMUST00000192535 Rangap1P46061 589 aaKnown RBP16.06■□□□□ 0.16
Pcdhgb5-201ENSMUST00000192535 Gm38655A0A286YDK6 273 aa16.04■□□□□ 0.16
Pcdhgb5-201ENSMUST00000192535 Cep164Q5DU05 1446 aa16.04■□□□□ 0.16
Pcdhgb5-201ENSMUST00000192535 Kdm5dQ62240 1548 aa15.99■□□□□ 0.15
Pcdhgb5-201ENSMUST00000192535 BlmO88700 1416 aa15.98■□□□□ 0.15
Pcdhgb5-201ENSMUST00000192535 Rad21Q61550 635 aaKnown RBP15.97■□□□□ 0.15
Pcdhgb5-201ENSMUST00000192535 Mrs2Q5NCE8 434 aa15.94■□□□□ 0.14
Pcdhgb5-201ENSMUST00000192535 Baz1aO88379 1555 aa15.93■□□□□ 0.14
Pcdhgb5-201ENSMUST00000192535 Safb2Q80YR5 991 aaKnown RBP15.91■□□□□ 0.14
Pcdhgb5-201ENSMUST00000192535 Clstn2Q9ER65 966 aa15.91■□□□□ 0.14
Pcdhgb5-201ENSMUST00000192535 Setd5Q5XJV7 1441 aa15.86■□□□□ 0.13
Pcdhgb5-201ENSMUST00000192535 P3h3Q8CG70 732 aa15.86■□□□□ 0.13
Retrieved 100 of 22,080 RNA–protein pairs in 114.3 ms