RNA–Protein interactions for RNA: ENSMUST00000190780.6

Fn1-217, Transcript of Fibronectin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Fn1, Length 7,694 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-217ENSMUST00000190780 Rhox8Q6VSS7 320 aa22■■□□□ 1.11
Fn1-217ENSMUST00000190780 Ube2uB1AUC4 352 aa20.25■□□□□ 0.83
Fn1-217ENSMUST00000190780 Zeb1Q64318 1117 aa19.98■□□□□ 0.79
Fn1-217ENSMUST00000190780 Esf1Q3V1V3 845 aaKnown RBP19.89■□□□□ 0.77
Fn1-217ENSMUST00000190780 Cngb1E1AZ71 1325 aa19.63■□□□□ 0.73
Fn1-217ENSMUST00000190780 Ehmt2Q9Z148 1263 aaKnown RBP19.53■□□□□ 0.72
Fn1-217ENSMUST00000190780 Npm2Q80W85 207 aa19.45■□□□□ 0.7
Fn1-217ENSMUST00000190780 Wdr66E9Q743 1299 aa19.36■□□□□ 0.69
Fn1-217ENSMUST00000190780 Pelp1Q9DBD5 1123 aaKnown RBP19.22■□□□□ 0.67
Fn1-217ENSMUST00000190780 Ccdc136Q3TVA9 1136 aa19.19■□□□□ 0.66
Fn1-217ENSMUST00000190780 Myt1lP97500 1187 aa19.18■□□□□ 0.66
Fn1-217ENSMUST00000190780 Las1lA2BE28 776 aaKnown RBP19.14■□□□□ 0.65
Fn1-217ENSMUST00000190780 Gab3Q8BSM5 595 aa19.11■□□□□ 0.65
Fn1-217ENSMUST00000190780 Amer1Q7TS75 1132 aa18.76■□□□□ 0.59
Fn1-217ENSMUST00000190780 Slc24a1Q91WD8 1130 aa18.74■□□□□ 0.59
Fn1-217ENSMUST00000190780 Rpgrip1Q9EPQ2 1331 aa18.73■□□□□ 0.59
Fn1-217ENSMUST00000190780 Plppr3Q7TPB0 716 aa18.72■□□□□ 0.59
Fn1-217ENSMUST00000190780 Os9Q8K2C7 672 aa18.71■□□□□ 0.59
Fn1-217ENSMUST00000190780 Il27Q8K3I6 234 aa18.66■□□□□ 0.58
Fn1-217ENSMUST00000190780 Gm13697A2AK42 830 aa18.59■□□□□ 0.57
Fn1-217ENSMUST00000190780 HrcG5E8J6 738 aa18.55■□□□□ 0.56
Fn1-217ENSMUST00000190780 Ifnlr1Q8CGK5 535 aa18.49■□□□□ 0.55
Fn1-217ENSMUST00000190780 Chic1Q8CBW7 227 aa18.43■□□□□ 0.54
Fn1-217ENSMUST00000190780 Trim41Q5NCC3 630 aa18.36■□□□□ 0.53
Fn1-217ENSMUST00000190780 Ttbk1Q6PCN3 1308 aa18.35■□□□□ 0.53
Fn1-217ENSMUST00000190780 Neurod1Q60867 357 aa18.32■□□□□ 0.52
Fn1-217ENSMUST00000190780 Zbtb7cQ8VCZ7 619 aa18.28■□□□□ 0.52
Fn1-217ENSMUST00000190780 UbtfP25976 765 aaKnown RBP18.24■□□□□ 0.51
Fn1-217ENSMUST00000190780 4930567H17RikQ3V0K5 233 aa18.22■□□□□ 0.51
Fn1-217ENSMUST00000190780 Ap3b1Q9Z1T1 1105 aa18.2■□□□□ 0.5
Fn1-217ENSMUST00000190780 DiexfQ8BTT6 772 aaKnown RBP18.18■□□□□ 0.5
Fn1-217ENSMUST00000190780 Atp1b4Q99ME6 356 aa18.16■□□□□ 0.5
Fn1-217ENSMUST00000190780 Gm13695A2AK44 830 aa18.12■□□□□ 0.49
Fn1-217ENSMUST00000190780 Anp32bQ9EST5 272 aaKnown RBP18■□□□□ 0.47
Fn1-217ENSMUST00000190780 Hnrnpul2Q00PI9 745 aaKnown RBP17.99■□□□□ 0.47
Fn1-217ENSMUST00000190780 Fam50aQ9WV03 339 aaKnown RBP17.99■□□□□ 0.47
Fn1-217ENSMUST00000190780 NclP09405 707 aaKnown RBP17.88■□□□□ 0.45
Fn1-217ENSMUST00000190780 Stra8P70278 393 aa17.85■□□□□ 0.45
Fn1-217ENSMUST00000190780 Erich6D3Z6S9 713 aa17.85■□□□□ 0.45
Fn1-217ENSMUST00000190780 NrdcQ8BHG1 1161 aa17.83■□□□□ 0.45
Fn1-217ENSMUST00000190780 Eif5bQ05D44 1216 aaKnown RBP17.83■□□□□ 0.44
Fn1-217ENSMUST00000190780 NeflP08551 543 aa17.82■□□□□ 0.44
Fn1-217ENSMUST00000190780 Prdm10Q3UTQ7 1184 aa17.81■□□□□ 0.44
Fn1-217ENSMUST00000190780 Safb2Q80YR5 991 aaKnown RBP17.79■□□□□ 0.44
Fn1-217ENSMUST00000190780 Cdk11bP24788 784 aaKnown RBP17.76■□□□□ 0.43
Fn1-217ENSMUST00000190780 4933416C03RikQ3V063 378 aa17.75■□□□□ 0.43
Fn1-217ENSMUST00000190780 Zbtb4Q5F293 982 aa17.74■□□□□ 0.43
Fn1-217ENSMUST00000190780 Fkbp15Q6P9Q6 1216 aaKnown RBP17.65■□□□□ 0.42
Fn1-217ENSMUST00000190780 Acin1Q9JIX8 1338 aaKnown RBP17.62■□□□□ 0.41
Fn1-217ENSMUST00000190780 Gm35339A0A140LHH9 1649 aa17.54■□□□□ 0.4
Fn1-217ENSMUST00000190780 Polr3glQ8R0C0 218 aa17.53■□□□□ 0.4
Fn1-217ENSMUST00000190780 Hdac5Q9Z2V6 1113 aa17.52■□□□□ 0.4
Fn1-217ENSMUST00000190780 Npm1Q61937 292 aaKnown RBP17.5■□□□□ 0.39
Fn1-217ENSMUST00000190780 Nlrp6Q91WS2 869 aa17.47■□□□□ 0.39
Fn1-217ENSMUST00000190780 CenpbP27790 599 aa17.44■□□□□ 0.38
Fn1-217ENSMUST00000190780 Rangap1P46061 589 aaKnown RBP17.42■□□□□ 0.38
Fn1-217ENSMUST00000190780 Lmod2Q3UHZ5 550 aa17.39■□□□□ 0.38
Fn1-217ENSMUST00000190780 MyclP10166 368 aa17.34■□□□□ 0.37
Fn1-217ENSMUST00000190780 P3h3Q8CG70 732 aa17.34■□□□□ 0.37
Fn1-217ENSMUST00000190780 Ppargc1bQ8VHJ7 1014 aa17.32■□□□□ 0.36
Fn1-217ENSMUST00000190780 NefmP08553 848 aa17.3■□□□□ 0.36
Fn1-217ENSMUST00000190780 Abcc9P70170 1546 aa17.29■□□□□ 0.36
Fn1-217ENSMUST00000190780 Znf326O88291 580 aa17.28■□□□□ 0.36
Fn1-217ENSMUST00000190780 Irx6Q9ER75 438 aa17.21■□□□□ 0.35
Fn1-217ENSMUST00000190780 ArxO35085 564 aa17.19■□□□□ 0.34
Fn1-217ENSMUST00000190780 Ythdc1E9Q5K9 736 aaKnown RBP17.18■□□□□ 0.34
Fn1-217ENSMUST00000190780 Ggt6Q6PDE7 497 aa17.15■□□□□ 0.34
Fn1-217ENSMUST00000190780 Hsp90aa1P07901 733 aaKnown RBP17.08■□□□□ 0.33
Fn1-217ENSMUST00000190780 Rtn4Q99P72 1162 aaKnown RBP17.06■□□□□ 0.32
Fn1-217ENSMUST00000190780 Zcchc6Q5BLK4 1491 aaKnown RBP17.05■□□□□ 0.32
Fn1-217ENSMUST00000190780 Clstn1Q9EPL2 979 aa17.05■□□□□ 0.32
Fn1-217ENSMUST00000190780 CatipB9EKE5 520 aa17.04■□□□□ 0.32
Fn1-217ENSMUST00000190780 Ppm1fQ8CGA0 452 aa16.95■□□□□ 0.3
Fn1-217ENSMUST00000190780 Q8BT18 775 aa16.92■□□□□ 0.3
Fn1-217ENSMUST00000190780 Ubap1lG3UW59 384 aa16.91■□□□□ 0.3
Fn1-217ENSMUST00000190780 Vsig10D3YX43 558 aa16.9■□□□□ 0.3
Fn1-217ENSMUST00000190780 Ecm2Q5FW85 670 aa16.9■□□□□ 0.3
Fn1-217ENSMUST00000190780 NgefQ8CHT1 710 aa16.88■□□□□ 0.29
Fn1-217ENSMUST00000190780 Slc4a1apE9PX68 744 aa16.84■□□□□ 0.29
Fn1-217ENSMUST00000190780 Fgd1P52734 960 aa16.83■□□□□ 0.28
Fn1-217ENSMUST00000190780 MlecQ6ZQI3 291 aaKnown RBP16.79■□□□□ 0.28
Fn1-217ENSMUST00000190780 Ubl4bQ9CQ84 188 aa16.79■□□□□ 0.28
Fn1-217ENSMUST00000190780 NischQ80TM9 1593 aa16.78■□□□□ 0.28
Fn1-217ENSMUST00000190780 Plekhg3Q4VAC9 1341 aa16.77■□□□□ 0.28
Fn1-217ENSMUST00000190780 TonslQ6NZL6 1363 aa16.77■□□□□ 0.28
Fn1-217ENSMUST00000190780 Tnnt3Q9QZ47 272 aa16.74■□□□□ 0.27
Fn1-217ENSMUST00000190780 Aplp2Q06335 707 aa16.71■□□□□ 0.27
Fn1-217ENSMUST00000190780 Trim26Q99PN3 545 aa16.71■□□□□ 0.27
Fn1-217ENSMUST00000190780 DaxxO35613 739 aa16.69■□□□□ 0.26
Fn1-217ENSMUST00000190780 Lmod3E9QA62 571 aa16.69■□□□□ 0.26
Fn1-217ENSMUST00000190780 Ppp1r18Q8BQ30 594 aa16.68■□□□□ 0.26
Fn1-217ENSMUST00000190780 Nop58Q6DFW4 536 aaKnown RBP16.68■□□□□ 0.26
Fn1-217ENSMUST00000190780 Csrnp3P59055 597 aa16.66■□□□□ 0.26
Fn1-217ENSMUST00000190780 Mapk8ip2Q9ERE9 830 aa16.66■□□□□ 0.26
Fn1-217ENSMUST00000190780 Prm3Q62100 101 aa16.63■□□□□ 0.25
Fn1-217ENSMUST00000190780 Upf2A2AT37 1269 aaKnown RBP16.63■□□□□ 0.25
Fn1-217ENSMUST00000190780 Rad21Q61550 635 aaKnown RBP16.58■□□□□ 0.24
Fn1-217ENSMUST00000190780 Grwd1Q810D6 446 aaKnown RBP16.56■□□□□ 0.24
Fn1-217ENSMUST00000190780 Chrna2Q91X60 512 aa16.5■□□□□ 0.23
Fn1-217ENSMUST00000190780 DekQ7TNV0 380 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 22,080 RNA–protein pairs in 117.2 ms