RNA–Protein interactions for RNA: ENSMUST00000176216.8

Cux1-207, Transcript of Homeobox protein cut-like 1, mousemouse

TSL 1 (best) BASIC

Gene Cux1, Length 2,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1-207ENSMUST00000176216 NischQ80TM9 1593 aa19.44■□□□□ 0.7
Cux1-207ENSMUST00000176216 Abcc9P70170 1546 aa18.85■□□□□ 0.61
Cux1-207ENSMUST00000176216 Gm35339A0A140LHH9 1649 aa18.84■□□□□ 0.61
Cux1-207ENSMUST00000176216 Rhox8Q6VSS7 320 aa18.46■□□□□ 0.55
Cux1-207ENSMUST00000176216 Abcc8B2RUS7 1588 aa18.39■□□□□ 0.53
Cux1-207ENSMUST00000176216 Rtl1Q7M732 1744 aa17.98■□□□□ 0.47
Cux1-207ENSMUST00000176216 Ccdc180J3QNE4 1664 aa17.8■□□□□ 0.44
Cux1-207ENSMUST00000176216 Zcchc6Q5BLK4 1491 aaKnown RBP17.52■□□□□ 0.4
Cux1-207ENSMUST00000176216 Rpgrip1Q9EPQ2 1331 aa17.26■□□□□ 0.35
Cux1-207ENSMUST00000176216 Ehmt2Q9Z148 1263 aaKnown RBP17.21■□□□□ 0.35
Cux1-207ENSMUST00000176216 Ccdc136Q3TVA9 1136 aa17.15■□□□□ 0.34
Cux1-207ENSMUST00000176216 Acin1Q9JIX8 1338 aaKnown RBP17.09■□□□□ 0.33
Cux1-207ENSMUST00000176216 ScribQ80U72 1612 aa17.07■□□□□ 0.32
Cux1-207ENSMUST00000176216 Rb1cc1Q9ESK9 1588 aa17.05■□□□□ 0.32
Cux1-207ENSMUST00000176216 Dcaf1Q80TR8 1506 aa17.04■□□□□ 0.32
Cux1-207ENSMUST00000176216 HrcG5E8J6 738 aa17.02■□□□□ 0.32
Cux1-207ENSMUST00000176216 Baz1aO88379 1555 aa16.82■□□□□ 0.28
Cux1-207ENSMUST00000176216 Kdm5dQ62240 1548 aa16.8■□□□□ 0.28
Cux1-207ENSMUST00000176216 Trim41Q5NCC3 630 aa16.78■□□□□ 0.28
Cux1-207ENSMUST00000176216 Pcgf6Q99NA9 353 aa16.6■□□□□ 0.25
Cux1-207ENSMUST00000176216 NacadQ5SWP3 1504 aa16.55■□□□□ 0.24
Cux1-207ENSMUST00000176216 Smarca2Q6DIC0 1577 aa16.47■□□□□ 0.23
Cux1-207ENSMUST00000176216 Cep164Q5DU05 1446 aa16.47■□□□□ 0.23
Cux1-207ENSMUST00000176216 Chic1Q8CBW7 227 aa16.36■□□□□ 0.21
Cux1-207ENSMUST00000176216 Crybg2B7ZCC2 1516 aa16.34■□□□□ 0.21
Cux1-207ENSMUST00000176216 Supt5hO55201 1082 aaKnown RBP16.34■□□□□ 0.21
Cux1-207ENSMUST00000176216 Cngb1E1AZ71 1325 aa16.33■□□□□ 0.2
Cux1-207ENSMUST00000176216 Gab3Q8BSM5 595 aa16.33■□□□□ 0.2
Cux1-207ENSMUST00000176216 Rsf1E9PWW9 1441 aaKnown RBP16.3■□□□□ 0.2
Cux1-207ENSMUST00000176216 Sycp2Q9CUU3 1500 aa16.21■□□□□ 0.19
Cux1-207ENSMUST00000176216 Ccdc88bQ4QRL3 1481 aa16.17■□□□□ 0.18
Cux1-207ENSMUST00000176216 Cecr2E9Q2Z1 1453 aa16.16■□□□□ 0.18
Cux1-207ENSMUST00000176216 Zeb1Q64318 1117 aa16.09■□□□□ 0.17
Cux1-207ENSMUST00000176216 Brd4Q9ESU6 1400 aaKnown RBP16.09■□□□□ 0.17
Cux1-207ENSMUST00000176216 Mier1Q5UAK0 511 aa16.05■□□□□ 0.16
Cux1-207ENSMUST00000176216 Golga3P55937 1487 aa16.04■□□□□ 0.16
Cux1-207ENSMUST00000176216 Synj1Q8CHC4 1574 aa16.01■□□□□ 0.15
Cux1-207ENSMUST00000176216 Neurod1Q60867 357 aa15.98■□□□□ 0.15
Cux1-207ENSMUST00000176216 Esf1Q3V1V3 845 aaKnown RBP15.94■□□□□ 0.14
Cux1-207ENSMUST00000176216 NefmP08553 848 aa15.9■□□□□ 0.14
Cux1-207ENSMUST00000176216 BicraF8VPZ9 1578 aa15.89■□□□□ 0.13
Cux1-207ENSMUST00000176216 Sall2Q9QX96 1004 aa15.87■□□□□ 0.13
Cux1-207ENSMUST00000176216 CftrP26361 1476 aa15.87■□□□□ 0.13
Cux1-207ENSMUST00000176216 Top2bQ64511 1612 aa15.78■□□□□ 0.12
Cux1-207ENSMUST00000176216 UbtfP25976 765 aaKnown RBP15.77■□□□□ 0.12
Cux1-207ENSMUST00000176216 Cc2d2aQ8CFW7 1633 aa15.71■□□□□ 0.11
Cux1-207ENSMUST00000176216 Cttnbp2B9EJA2 1648 aa15.67■□□□□ 0.1
Cux1-207ENSMUST00000176216 Aebp2Q9Z248 504 aaKnown RBP15.66■□□□□ 0.1
Cux1-207ENSMUST00000176216 Myt1lP97500 1187 aa15.64■□□□□ 0.09
Cux1-207ENSMUST00000176216 Rapgef2Q8CHG7 1496 aa15.64■□□□□ 0.09
Cux1-207ENSMUST00000176216 Wdr66E9Q743 1299 aa15.6■□□□□ 0.09
Cux1-207ENSMUST00000176216 Ppargc1bQ8VHJ7 1014 aa15.59■□□□□ 0.09
Cux1-207ENSMUST00000176216 Smarca4Q3TKT4 1613 aaKnown RBP15.55■□□□□ 0.08
Cux1-207ENSMUST00000176216 Cep162Q6ZQ06 1403 aa15.55■□□□□ 0.08
Cux1-207ENSMUST00000176216 Top2aQ01320 1528 aaKnown RBP15.53■□□□□ 0.08
Cux1-207ENSMUST00000176216 Fmn1Q05860 1466 aa15.53■□□□□ 0.08
Cux1-207ENSMUST00000176216 Las1lA2BE28 776 aaKnown RBP15.52■□□□□ 0.08
Cux1-207ENSMUST00000176216 Npm2Q80W85 207 aa15.47■□□□□ 0.07
Cux1-207ENSMUST00000176216 Anks4bQ8K3X6 423 aa15.47■□□□□ 0.07
Cux1-207ENSMUST00000176216 Plekhg3Q4VAC9 1341 aa15.47■□□□□ 0.07
Cux1-207ENSMUST00000176216 Csrnp3P59055 597 aa15.46■□□□□ 0.07
Cux1-207ENSMUST00000176216 ClspnQ80YR7 1315 aa15.41■□□□□ 0.06
Cux1-207ENSMUST00000176216 1700123L14RikQ3V2K7 440 aa15.4■□□□□ 0.06
Cux1-207ENSMUST00000176216 Clip1Q922J3 1391 aa15.39■□□□□ 0.05
Cux1-207ENSMUST00000176216 TonslQ6NZL6 1363 aa15.37■□□□□ 0.05
Cux1-207ENSMUST00000176216 Nop58Q6DFW4 536 aaKnown RBP15.36■□□□□ 0.05
Cux1-207ENSMUST00000176216 Cdk11bP24788 784 aaKnown RBP15.35■□□□□ 0.05
Cux1-207ENSMUST00000176216 Iqgap2Q3UQ44 1575 aa15.35■□□□□ 0.05
Cux1-207ENSMUST00000176216 Eif4g1Q6NZJ6 1600 aaKnown RBP15.31■□□□□ 0.04
Cux1-207ENSMUST00000176216 Ncapd3Q6ZQK0 1506 aa15.29■□□□□ 0.04
Cux1-207ENSMUST00000176216 Ap3b1Q9Z1T1 1105 aa15.26■□□□□ 0.03
Cux1-207ENSMUST00000176216 PtprkP35822 1457 aa15.24■□□□□ 0.03
Cux1-207ENSMUST00000176216 Eid3Q3V124 375 aa15.22■□□□□ 0.03
Cux1-207ENSMUST00000176216 Arhgap35Q91YM2 1499 aa15.22■□□□□ 0.03
Cux1-207ENSMUST00000176216 Il27Q8K3I6 234 aa15.2■□□□□ 0.02
Cux1-207ENSMUST00000176216 Arap1Q4LDD4 1452 aa15.18■□□□□ 0.02
Cux1-207ENSMUST00000176216 Gm38655A0A286YDK6 273 aa15.18■□□□□ 0.02
Cux1-207ENSMUST00000176216 Atad2bE9Q166 1460 aaKnown RBP15.17■□□□□ 0.02
Cux1-207ENSMUST00000176216 TnnQ80Z71 1560 aa15.16■□□□□ 0.02
Cux1-207ENSMUST00000176216 Eea1Q8BL66 1411 aa15.12■□□□□ 0.01
Cux1-207ENSMUST00000176216 NrkQ9R0G8 1455 aa15.09■□□□□ 0.01
Cux1-207ENSMUST00000176216 Setd5Q5XJV7 1441 aa15.09■□□□□ 0.01
Cux1-207ENSMUST00000176216 Kdm5bQ80Y84 1544 aa15.08■□□□□ 0
Cux1-207ENSMUST00000176216 Aplp2Q06335 707 aa15.07■□□□□ 0
Cux1-207ENSMUST00000176216 Arhgef5E9Q7D5 1581 aa15.06■□□□□ 0
Cux1-207ENSMUST00000176216 Frmpd1A2AKB4 1549 aa15.06■□□□□ 0
Cux1-207ENSMUST00000176216 Mapk8ip2Q9ERE9 830 aa15.04■□□□□ -0
Cux1-207ENSMUST00000176216 Kif15Q6P9L6 1387 aa15.03■□□□□ -0
Cux1-207ENSMUST00000176216 Pds5bQ4VA53 1446 aaKnown RBP15.02■□□□□ -0
Cux1-207ENSMUST00000176216 Shroom4Q1W617 1475 aa15□□□□□ -0.01
Cux1-207ENSMUST00000176216 AqrQ8CFQ3 1481 aaKnown RBP15□□□□□ -0.01
Cux1-207ENSMUST00000176216 Ccdc18Q640L5 1455 aa15□□□□□ -0.01
Cux1-207ENSMUST00000176216 Lamc3Q9R0B6 1581 aa14.99□□□□□ -0.01
Cux1-207ENSMUST00000176216 Wdr62Q3U3T8 1523 aa14.98□□□□□ -0.01
Cux1-207ENSMUST00000176216 BlmO88700 1416 aa14.96□□□□□ -0.01
Cux1-207ENSMUST00000176216 Tiam1Q60610 1591 aa14.95□□□□□ -0.02
Cux1-207ENSMUST00000176216 Naip1Q9QWK5 1403 aa14.95□□□□□ -0.02
Cux1-207ENSMUST00000176216 Camsap1A2AHC3 1581 aa14.94□□□□□ -0.02
Cux1-207ENSMUST00000176216 Hnrnpul2Q00PI9 745 aaKnown RBP14.94□□□□□ -0.02
Cux1-207ENSMUST00000176216 Fam50aQ9WV03 339 aaKnown RBP14.93□□□□□ -0.02
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms