RNA–Protein interactions for RNA: ENSMUST00000172269.1

Sptbn4-207, Transcript of Spectrin beta chain, mousemouse

APPRIS ALT2 TSL 2 BASIC

Gene Sptbn4, Length 8,737 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptbn4-207ENSMUST00000172269 Rhox8Q6VSS7 320 aa31.67■■■□□ 2.66
Sptbn4-207ENSMUST00000172269 Rpgrip1Q9EPQ2 1331 aa30.53■■■□□ 2.48
Sptbn4-207ENSMUST00000172269 Cngb1E1AZ71 1325 aa30.42■■■□□ 2.46
Sptbn4-207ENSMUST00000172269 Pelp1Q9DBD5 1123 aaKnown RBP30.07■■■□□ 2.4
Sptbn4-207ENSMUST00000172269 Las1lA2BE28 776 aaKnown RBP29.95■■■□□ 2.38
Sptbn4-207ENSMUST00000172269 Wdr66E9Q743 1299 aa28.73■■■□□ 2.19
Sptbn4-207ENSMUST00000172269 Ube2uB1AUC4 352 aa28.57■■■□□ 2.16
Sptbn4-207ENSMUST00000172269 Amer1Q7TS75 1132 aa28.48■■■□□ 2.15
Sptbn4-207ENSMUST00000172269 Rtl1Q7M732 1744 aa28.37■■■□□ 2.13
Sptbn4-207ENSMUST00000172269 Ehmt2Q9Z148 1263 aaKnown RBP28.33■■■□□ 2.13
Sptbn4-207ENSMUST00000172269 4930567H17RikQ3V0K5 233 aa28.24■■■□□ 2.11
Sptbn4-207ENSMUST00000172269 Esf1Q3V1V3 845 aaKnown RBP28.17■■■□□ 2.1
Sptbn4-207ENSMUST00000172269 Stra8P70278 393 aa28.16■■■□□ 2.1
Sptbn4-207ENSMUST00000172269 CenpbP27790 599 aa28.09■■■□□ 2.09
Sptbn4-207ENSMUST00000172269 Zeb1Q64318 1117 aa28.06■■■□□ 2.08
Sptbn4-207ENSMUST00000172269 Npm2Q80W85 207 aa27.78■■■□□ 2.04
Sptbn4-207ENSMUST00000172269 Ccdc180J3QNE4 1664 aa27.74■■■□□ 2.03
Sptbn4-207ENSMUST00000172269 Trim41Q5NCC3 630 aa27.63■■■□□ 2.01
Sptbn4-207ENSMUST00000172269 Ccdc136Q3TVA9 1136 aa27.62■■■□□ 2.01
Sptbn4-207ENSMUST00000172269 Myt1Q8CFC2 1127 aa27.51■■□□□ 1.99
Sptbn4-207ENSMUST00000172269 NefmP08553 848 aa27.44■■□□□ 1.98
Sptbn4-207ENSMUST00000172269 Gab3Q8BSM5 595 aa27.32■■□□□ 1.96
Sptbn4-207ENSMUST00000172269 Myt1lP97500 1187 aa27.28■■□□□ 1.96
Sptbn4-207ENSMUST00000172269 NischQ80TM9 1593 aa27.22■■□□□ 1.95
Sptbn4-207ENSMUST00000172269 Anp32bQ9EST5 272 aaKnown RBP27.14■■□□□ 1.93
Sptbn4-207ENSMUST00000172269 4933416C03RikQ3V063 378 aa27.11■■□□□ 1.93
Sptbn4-207ENSMUST00000172269 NeflP08551 543 aa27.1■■□□□ 1.93
Sptbn4-207ENSMUST00000172269 Slc24a1Q91WD8 1130 aa27.02■■□□□ 1.92
Sptbn4-207ENSMUST00000172269 Acin1Q9JIX8 1338 aaKnown RBP27.02■■□□□ 1.92
Sptbn4-207ENSMUST00000172269 Tnnt3Q9QZ47 272 aa26.98■■□□□ 1.91
Sptbn4-207ENSMUST00000172269 Ttbk1Q6PCN3 1308 aa26.95■■□□□ 1.9
Sptbn4-207ENSMUST00000172269 NrdcQ8BHG1 1161 aa26.86■■□□□ 1.89
Sptbn4-207ENSMUST00000172269 Rtl5Q5DTT4 599 aa26.81■■□□□ 1.88
Sptbn4-207ENSMUST00000172269 Cdk11bP24788 784 aaKnown RBP26.77■■□□□ 1.88
Sptbn4-207ENSMUST00000172269 UbtfP25976 765 aaKnown RBP26.77■■□□□ 1.88
Sptbn4-207ENSMUST00000172269 HrcG5E8J6 738 aa26.52■■□□□ 1.84
Sptbn4-207ENSMUST00000172269 Os9Q8K2C7 672 aa26.34■■□□□ 1.81
Sptbn4-207ENSMUST00000172269 NclP09405 707 aaKnown RBP26.33■■□□□ 1.81
Sptbn4-207ENSMUST00000172269 Nop58Q6DFW4 536 aaKnown RBP26.27■■□□□ 1.8
Sptbn4-207ENSMUST00000172269 Eif5bQ05D44 1216 aaKnown RBP26.19■■□□□ 1.78
Sptbn4-207ENSMUST00000172269 Fam50aQ9WV03 339 aaKnown RBP26.09■■□□□ 1.77
Sptbn4-207ENSMUST00000172269 Neurod1Q60867 357 aa26.03■■□□□ 1.76
Sptbn4-207ENSMUST00000172269 Pcgf6Q99NA9 353 aa25.92■■□□□ 1.74
Sptbn4-207ENSMUST00000172269 TonslQ6NZL6 1363 aa25.88■■□□□ 1.73
Sptbn4-207ENSMUST00000172269 Il27Q8K3I6 234 aa25.8■■□□□ 1.72
Sptbn4-207ENSMUST00000172269 DaxxO35613 739 aa25.79■■□□□ 1.72
Sptbn4-207ENSMUST00000172269 Hdac5Q9Z2V6 1113 aa25.71■■□□□ 1.71
Sptbn4-207ENSMUST00000172269 Anp32aO35381 247 aa25.7■■□□□ 1.7
Sptbn4-207ENSMUST00000172269 DiexfQ8BTT6 772 aaKnown RBP25.63■■□□□ 1.69
Sptbn4-207ENSMUST00000172269 CatipB9EKE5 520 aa25.63■■□□□ 1.69
Sptbn4-207ENSMUST00000172269 Ap3b1Q9Z1T1 1105 aa25.56■■□□□ 1.68
Sptbn4-207ENSMUST00000172269 Ythdc1E9Q5K9 736 aaKnown RBP25.52■■□□□ 1.68
Sptbn4-207ENSMUST00000172269 Nlrp6Q91WS2 869 aa25.46■■□□□ 1.67
Sptbn4-207ENSMUST00000172269 Upf2A2AT37 1269 aaKnown RBP25.41■■□□□ 1.66
Sptbn4-207ENSMUST00000172269 Zcchc6Q5BLK4 1491 aaKnown RBP25.41■■□□□ 1.66
Sptbn4-207ENSMUST00000172269 Gm13697A2AK42 830 aa25.39■■□□□ 1.65
Sptbn4-207ENSMUST00000172269 ClspnQ80YR7 1315 aa25.33■■□□□ 1.65
Sptbn4-207ENSMUST00000172269 Hsp90aa1P07901 733 aaKnown RBP25.33■■□□□ 1.64
Sptbn4-207ENSMUST00000172269 Ccdc9Q8VC31 543 aaKnown RBP25.22■■□□□ 1.63
Sptbn4-207ENSMUST00000172269 Supt5hO55201 1082 aaKnown RBP25.21■■□□□ 1.63
Sptbn4-207ENSMUST00000172269 Hnrnpul2Q00PI9 745 aaKnown RBP25.19■■□□□ 1.62
Sptbn4-207ENSMUST00000172269 Polr3glQ8R0C0 218 aa25.14■■□□□ 1.62
Sptbn4-207ENSMUST00000172269 Atp1b4Q99ME6 356 aa25.09■■□□□ 1.61
Sptbn4-207ENSMUST00000172269 Ppargc1bQ8VHJ7 1014 aa25.09■■□□□ 1.61
Sptbn4-207ENSMUST00000172269 Abcc9P70170 1546 aa25.07■■□□□ 1.6
Sptbn4-207ENSMUST00000172269 Chic1Q8CBW7 227 aa25.05■■□□□ 1.6
Sptbn4-207ENSMUST00000172269 Mier1Q5UAK0 511 aa25.02■■□□□ 1.6
Sptbn4-207ENSMUST00000172269 Gm13695A2AK44 830 aa25■■□□□ 1.59
Sptbn4-207ENSMUST00000172269 Zbtb7cQ8VCZ7 619 aa24.98■■□□□ 1.59
Sptbn4-207ENSMUST00000172269 Erich6D3Z6S9 713 aa24.93■■□□□ 1.58
Sptbn4-207ENSMUST00000172269 Trim44Q9QXA7 346 aa24.92■■□□□ 1.58
Sptbn4-207ENSMUST00000172269 Npm1Q61937 292 aaKnown RBP24.9■■□□□ 1.58
Sptbn4-207ENSMUST00000172269 ArxO35085 564 aa24.89■■□□□ 1.57
Sptbn4-207ENSMUST00000172269 Lmod3E9QA62 571 aa24.86■■□□□ 1.57
Sptbn4-207ENSMUST00000172269 Ccer2J3QPU5 274 aa24.83■■□□□ 1.57
Sptbn4-207ENSMUST00000172269 DekQ7TNV0 380 aaKnown RBP24.75■■□□□ 1.55
Sptbn4-207ENSMUST00000172269 Adam1bQ8R534 806 aa24.69■■□□□ 1.54
Sptbn4-207ENSMUST00000172269 Dcaf1Q80TR8 1506 aa24.69■■□□□ 1.54
Sptbn4-207ENSMUST00000172269 Znf326O88291 580 aa24.68■■□□□ 1.54
Sptbn4-207ENSMUST00000172269 Calr4Q3TQS0 420 aa24.68■■□□□ 1.54
Sptbn4-207ENSMUST00000172269 Lmod2Q3UHZ5 550 aa24.68■■□□□ 1.54
Sptbn4-207ENSMUST00000172269 Aplp2Q06335 707 aa24.66■■□□□ 1.54
Sptbn4-207ENSMUST00000172269 Gm35339A0A140LHH9 1649 aa24.66■■□□□ 1.54
Sptbn4-207ENSMUST00000172269 Anks4bQ8K3X6 423 aa24.66■■□□□ 1.54
Sptbn4-207ENSMUST00000172269 Zbtb4Q5F293 982 aa24.64■■□□□ 1.54
Sptbn4-207ENSMUST00000172269 Brd4Q9ESU6 1400 aaKnown RBP24.62■■□□□ 1.53
Sptbn4-207ENSMUST00000172269 Plekhg3Q4VAC9 1341 aa24.62■■□□□ 1.53
Sptbn4-207ENSMUST00000172269 Ppp4r2Q0VGB7 417 aa24.61■■□□□ 1.53
Sptbn4-207ENSMUST00000172269 Fgd1P52734 960 aa24.6■■□□□ 1.53
Sptbn4-207ENSMUST00000172269 Prdm10Q3UTQ7 1184 aa24.57■■□□□ 1.52
Sptbn4-207ENSMUST00000172269 Wdr43Q6ZQL4 677 aaKnown RBP24.53■■□□□ 1.52
Sptbn4-207ENSMUST00000172269 Htatsf1Q8BGC0 757 aa24.5■■□□□ 1.51
Sptbn4-207ENSMUST00000172269 PtmaP26350 111 aa24.47■■□□□ 1.51
Sptbn4-207ENSMUST00000172269 Cep164Q5DU05 1446 aa24.46■■□□□ 1.51
Sptbn4-207ENSMUST00000172269 Csrnp3P59055 597 aa24.46■■□□□ 1.51
Sptbn4-207ENSMUST00000172269 Ifnlr1Q8CGK5 535 aa24.44■■□□□ 1.5
Sptbn4-207ENSMUST00000172269 Clstn2Q9ER65 966 aa24.44■■□□□ 1.5
Sptbn4-207ENSMUST00000172269 PnnO35691 725 aaKnown RBP24.41■■□□□ 1.5
Sptbn4-207ENSMUST00000172269 Hsp90ab1P11499 724 aaKnown RBP24.4■■□□□ 1.5
Sptbn4-207ENSMUST00000172269 Clip1Q922J3 1391 aa24.35■■□□□ 1.49
Retrieved 100 of 22,080 RNA–protein pairs in 57.9 ms